CN186589
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186589 vs. ExPASy Swiss-Prot
Match: RLA0_METBU (Acidic ribosomal protein P0 homolog OS=Methanococcoides burtonii (strain DSM 6242) GN=rplP0 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.180e-11 Identity = 38/126 (30.16%), Postives = 64/126 (50.79%), Query Frame = -2 Query: 395 APARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPT 769 +P + G+VA D++V G T P Q IP I+ G V I + + G+ V AA+L +L I P GL +++V E GS+++P+VL + E+ + F + +++ +YPT Sbjct: 110 SPIKAGMVATSDIIVEKGPTSFPPGPILGDMQGAGIPAAIDGGKVVIKETKAVAKAGEVVSQKLAAMLTRLEIYPLEVGLDLRAVLEEGSIFTPDVLAIDEEQIFSNFVQAAQQAFNMSVNAAYPT 235
BLAST of CN186589 vs. ExPASy Swiss-Prot
Match: RLA0_METMA (Acidic ribosomal protein P0 homolog OS=Methanosarcina mazei GN=rplP0 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.342e-11 Identity = 39/138 (28.26%), Postives = 65/138 (47.10%), Query Frame = -2 Query: 359 APARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAY 769 +P + G +AP D++V G T P Q IP I+ G V + + + G+ V A +L+KL I P GL +++ Y++G++Y PE+L + E + L++ +YPT A + AY Sbjct: 111 SPIKAGAIAPEDIIVQKGPTSFPPGPILGELQSAGIPASIDAGKVAVKETKVVCKAGEAVPQKLATMLSKLEIYPLIVGLDLRAAYDDGTIYEPELLAVDESKYFSDIIRAAQNAFNLSVNTAYPTGATIGTLLAKAY 248
BLAST of CN186589 vs. ExPASy Swiss-Prot
Match: RLA0_ARCFU (Acidic ribosomal protein P0 homolog OS=Archaeoglobus fulgidus GN=rplP0 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.284e-11 Identity = 40/146 (27.40%), Postives = 74/146 (50.68%), Query Frame = -2 Query: 335 APARVGLVAPIDVVVPPGNTGLDPSQT-SFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASSVSMVTALALAISYPTLAAAPHMFVNAYKNVVAVAL 769 +P + V+P+DVVV G T + P + Q+ +P I KG V + +++ G+ V A L +L I+P GL V+++ ++G + +PE L + + ++E F + M LA+ +Y T A + + A + +A+ Sbjct: 108 SPLKPNQVSPVDVVVNEGPTPIPPGPLMAELQMAGLPVAIEKGKVVVKATTTVVKAGEVVRPEVARALERLDIKPIKIGLDVKAMLDSGVILTPETLAIDTEKVLEDFQRAYQMALNLAVNSAYVTEETAEILIMKAVMDARNLAI 253 The following BLAST results are available for this feature:
BLAST of CN186589 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186589 ID=CN186589; Name=CN186589; organism=Citrus sinensis; type=EST; length=812bpback to top |