CN186582

Overview
NameCN186582
Unique NameCN186582
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRI2_SOYBN (Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.490e-56
Identity = 114/182 (62.64%), Postives = 136/182 (74.73%), Query Frame = 3
Query:  204 RSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RS +V AA +A + PL GV+F+PF+E+KK+          X ARQ Y D+ E+AINEQINVEYNVSYVYHAL+AYFDRDNIAL+GL                  ++YQN+RGG+V LH I  PPSEF+H+EKGDALYAMELALSLEKLTNEKLL +HSVA+RNNDPQ A F+ESEFL EQV+
Sbjct:   42 RSSRVCAASNAPA-PLAGVIFEPFQELKKDYLAVPIAHNVXLARQNYADDSESAINEQINVEYNVSYVYHALFAYFDRDNIALKGLAKFFKESSEEEREHAEQLIKYQNIRGGRVVLHPITSPPSEFEHSEKGDALYAMELALSLEKLTNEKLLHVHSVAERNNDPQXADFIESEFLYEQVK 222          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRI1_TOBAC (Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=FER1 PE=2 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 1.490e-56
Identity = 112/187 (59.89%), Postives = 132/187 (70.59%), Query Frame = 3
Query:  189 SPRTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            SP+      VSA+   N  PLTGVVF+PFEE+KKE             RQKY D+CEAAINEQINVEYN SYVYHA++AYFDRDN+AL+GL                  ME+QN RGG+VKL SI  PP+EFDH EKGDALYAMELAL LEKLTN++LL+LH+VA R+ND  +A F+ESEFL EQV+
Sbjct:   30 SPKNGNRFVVSASKATNHKPLTGVVFEPFEELKKELMLVPAVPDTSLCRQKYSDDCEAAINEQINVEYNNSYVYHAMFAYFDRDNVALKGLAKFFKESSLEEREHAEKLMEFQNKRGGRVKLLSICAPPTEFDHCEKGDALYAMELALCLEKLTNQRLLNLHAVASRSNDVHLADFLESEFLVEQVD 216          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRI4_ARATH (Ferritin-4, chloroplastic OS=Arabidopsis thaliana GN=FER4 PE=2 SV=1)

HSP 1 Score: 218.009 bits (554), Expect = 4.335e-56
Identity = 112/176 (63.64%), Postives = 128/176 (72.73%), Query Frame = 3
Query:  222 AAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            A+  + +  L+GVVF+PF+EVKKE            ARQKY DECEAAINEQINVEYNVSYVYHA+YAYFDRDNIAL+GL                  MEYQN RGG+VKL SI+ P SEF+H +KGDALY MELALSLEKL NEKLL+LHSVA +NND  +A F+ESEFL EQVE
Sbjct:   53 ASKSSTTDALSGVVFEPFKEVKKELDLVPTSSHLSLARQKYSDECEAAINEQINVEYNVSYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNKRGGRVKLQSIVMPLSEFEHVDKGDALYGMELALSLEKLVNEKLLNLHSVASKNNDVHLADFIESEFLTEQVE 228          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRI2_ARATH (Ferritin-2, chloroplastic OS=Arabidopsis thaliana GN=FER2 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.810e-55
Identity = 115/187 (61.50%), Postives = 128/187 (68.45%), Query Frame = 3
Query:  189 SPRTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            SP   R   V AA   N+  LTGVVF+PFEEVKKE            AR K+ D+ E+AIN+QINVEYNVSYVYHALYAYFDRDN+ L+G                   MEYQN RGG+VKL SI+ P SEFDH EKGDAL+AMELALSLEKLTNEKLL L SV  +NND Q+  FVESEFLGEQVE
Sbjct:   35 SPSGSR-FSVQAAKGTNTKSLTGVVFEPFEEVKKEMELVPTTPFVSLARHKFSDDSESAINDQINVEYNVSYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRGGRVKLQSILMPVSEFDHEEKGDALHAMELALSLEKLTNEKLLKLQSVGVKNNDVQLVDFVESEFLGEQVE 220          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRI3_ARATH (Ferritin-3, chloroplastic OS=Arabidopsis thaliana GN=FER3 PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 6.259e-55
Identity = 118/205 (57.56%), Postives = 135/205 (65.85%), Query Frame = 3
Query:  135 SSSCYTKSTASLVKLGCISPRTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            SSS    S  S  K G +S      L+ S +    +  L+GVVF+PFEEVKKE            AR  Y  ECEAA+NEQINVEYNVSYVYHALYAYFDRDN+AL+GL                  MEYQN RGG+VKL  ++ P SEFDH EKGDALYAMELALSLEKL NEKLL+LHSVA +N+D Q+A F+ES FL EQVE
Sbjct:   26 SSSSSISSPVSSGKSGNLS----FPLRASKSSTTTTSTLSGVVFEPFEEVKKEMDLVPSGQQLSLARHLYSPECEAAVNEQINVEYNVSYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNKRGGRVKLQPMVLPQSEFDHPEKGDALYAMELALSLEKLVNEKLLNLHSVASKNDDVQLADFIESVFLNEQVE 226          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRI1_PEA (Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 213.386 bits (542), Expect = 1.068e-54
Identity = 105/174 (60.34%), Postives = 124/174 (71.26%), Query Frame = 3
Query:  228 VDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            V A + PLTGV+F+PFEEVKK+            ARQ + DECE+ INEQINVEYN SYVYH+L+AYFDRDN+AL+G                   M+YQN RGG+V LH I   PSEF+H EKGDALYAMELALSLEKLTNEKLL++HSVA+RNND +M  F+E E+L EQVE
Sbjct:   45 VSATTAPLTGVIFEPFEEVKKDYLAVPSVPLVSLARQNFADECESVINEQINVEYNASYVYHSLFAYFDRDNVALKGFAKFFKESSEEHREHAEKLMKYQNTRGGRVVLHPIKDVPSEFEHVEKGDALYAMELALSLEKLTNEKLLNVHSVAERNNDLEMTHFIEGEYLAEQVE 218          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRI2_MAIZE (Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 1.443e-51
Identity = 106/185 (57.30%), Postives = 123/185 (66.49%), Query Frame = 3
Query:  195 RTKRSLKVSAAVDANSMPLTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            R+  SL  +AA       L+GVVFQPFEE+K E            AR K+ D+CEAAINEQINVEYN SY YH+L+AYFDRDN+AL+G                   MEYQN RGG+V+L SI+ P +EFDH EKGDALYAMEL L+LEKL NEKL SLH VA R NDPQ+  F+ESEFL EQ E
Sbjct:   34 RSGVSLSAAAAAGKGKEVLSGVVFQPFEEIKGELALVPQSPDRSLARHKFVDDCEAAINEQINVEYNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEEREHAEKLMEYQNKRGGRVRLQSIVAPLTEFDHPEKGDALYAMELTLALEKLVNEKLHSLHGVATRCNDPQLIDFIESEFLEEQGE 218          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRI1_MAIZE (Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 3.554e-50
Identity = 100/167 (59.88%), Postives = 117/167 (70.06%), Query Frame = 3
Query:  249 LTGVVFQPFEEVKKEXXXXXXXXXXXXARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            L+GVVFQPFEE+K E            AR K+ D+CEAA+NEQINVEYN SY YH+L+AYFDRDN+AL+G                   MEYQN RGG+V+L SI+ P +EFDH EKGDALYAMELAL+LEKL NEKL +LH VA R NDPQ+  F+ESEFL EQ E
Sbjct:   55 LSGVVFQPFEEIKGELALVPQSPDKSLARHKFVDDCEAALNEQINVEYNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEEREHAEKLMEYQNKRGGRVRLQSIVTPLTEFDHPEKGDALYAMELALALEKLVNEKLHNLHGVATRCNDPQLTDFIESEFLEEQGE 221          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIS_LYMST (Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.964e-24
Identity = 63/140 (45.00%), Postives = 80/140 (57.14%), Query Frame = 3
Query:  330 ARQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            ARQ Y  E EA IN QIN+E   SY Y ++  YFDRD++AL G                   M+YQN RGG++ L  I +P    D  E G  L AM++AL LEK  N+ LL LH +   ++D QMA F+ESEFL EQV+
Sbjct:    6 ARQNYHAESEAGINRQINMELYASYSYQSMAYYFDRDDVALPGFHKFFKHQSEEEREHAEKLMKYQNKRGGRIVLQDIKKP----DRDEWGTGLEAMQVALQLEKSVNQSLLDLHKLCTSHDDAQMADFLESEFLEEQVK 141          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRI2_RANCA (Ferritin, middle subunit OS=Rana catesbeiana PE=1 SV=3)

HSP 1 Score: 112.079 bits (279), Expect = 3.350e-24
Identity = 58/139 (41.73%), Postives = 80/139 (57.55%), Query Frame = 3
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ Y  +CEAA+N  +N+E   SY Y ++YA+FDRD++AL  +                  M+YQN RGG+V L  I +P    +  E G+ L AM+ AL LEK  N+ LL LH +A    DP +  F+ESE+L EQV+
Sbjct:    6 RQNYHSDCEAAVNRMLNLELYASYTYSSMYAFFDRDDVALHNVAEFFKEHSHEEREHAEKFMKYQNKRGGRVVLQDIKKP----ERDEWGNTLEAMQAALQLEKTVNQALLDLHKLATDKVDPHLCDFLESEYLEEQVK 140          
The following BLAST results are available for this feature:
BLAST of CN186582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
FRI2_SOYBN1.490e-5662.64Ferritin-2, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI1_TOBAC1.490e-5659.89Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI4_ARATH4.335e-5663.64Ferritin-4, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI2_ARATH2.810e-5561.50Ferritin-2, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI3_ARATH6.259e-5557.56Ferritin-3, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI1_PEA1.068e-5460.34Ferritin-1, chloroplastic OS=Pisum sativum PE=1 SV... [more]
FRI2_MAIZE1.443e-5157.30Ferritin-2, chloroplastic OS=Zea mays GN=FER2 PE=1... [more]
FRI1_MAIZE3.554e-5059.88Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1... [more]
FRIS_LYMST1.964e-2445.00Soma ferritin OS=Lymnaea stagnalis PE=2 SV=2[more]
FRI2_RANCA3.350e-2441.73Ferritin, middle subunit OS=Rana catesbeiana PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003C06_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186582 ID=CN186582; Name=CN186582; organism=Citrus sinensis; type=EST; length=749bp
AGTGGCCATTCTTCTTCATCAAATTCATTTGCTTTCTTCCTTCAATCTCC
ATTACGCACTTGCTTACATCAATGGCATTGGCAGCTTCTTCTTCCTCCTC
TCTTGCAGCGAAGCAACTGGCTGGTCTTATAACAAGCTCATCATGTTACA
CTAAGTCTACTGCTTCTCTTGTGAAATTGGGTTGTATTTCGCCGAGAACG
AAGAGGAGTCTGAAGGTTTCTGCTGCTGTGGACGCCAATAGCATGCCGCT
GACCGGGGTCGTGTTTCAGCCATTCGAAGAGGTCAAGAAAGAGGTTCTTG
ATGTTCCTGTTTCCCCTCTGCTTTCACTAGCTCGCCAAAAGTATGAGGAC
GAGTGTGAGGCCGCTATCAACGAGCAGATCAATGTGGAATATAATGTCTC
ATACGTGTACCATGCCCTGTATGCGTACTTTGATCGGGATAATATTGCTC
TGAGAGGCCTTGCCAAATTTTTCAAGGAGTCCAGTGAAGAAGAAAGGGAA
CATGCTGAGAAGTTTATGGAGTATCAGAACTTGCGCGGTGGAAAAGTAAA
ACTGCACTCCATAATGCAGCCCCCTTCGGAGTTTGATCATGCGGAGAAAG
GGGATGCCTTGTATGCAATGGAACTAGCATTGTCCCTGGAGAAGCTAACA
AACGAGAAGCTTCTGAGCCTGCACAGTGTGGCGGATAGAAACAATGATCC
CCAAATGGCAAAGTTTGTCGAGAGTGAATTTTTGGGTGAGCAGGTTGAA
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