CN186582

Overview
NameCN186582
Unique NameCN186582
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig121 contig Csv1_Contig121:1..745. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIH_PAGBE (Ferritin, heavy subunit OS=Pagothenia bernacchii PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.837e-23
Identity = 57/139 (41.01%), Postives = 78/139 (56.12%), Query Frame = 3
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ +  +CEAAIN QIN+E   SY Y ++  YFDRD++AL G                   +++QN RGG++ L  + +P    D  E G  L A+E AL LEK  N+ LL LH V   +NDP M  F+E+ +L EQV+
Sbjct:    6 RQNFHKDCEAAINRQINLELYASYSYLSMAYYFDRDDVALPGFAHFFKQQSEEEREHAEKLLKFQNQRGGRIFLQDVKKP----DRDEWGSGLDALECALQLEKNVNQSLLDLHKVCSEHNDPHMCDFLETHYLDEQVK 140          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIH_CHICK (Ferritin heavy chain OS=Gallus gallus GN=FTH PE=2 SV=2)

HSP 1 Score: 108.227 bits (269), Expect = 4.837e-23
Identity = 58/139 (41.73%), Postives = 78/139 (56.12%), Query Frame = 3
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ Y  +CEAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +  + L AME AL LEK  N+ LL LH +A   NDP +  F+E+ +L EQV+
Sbjct:    9 RQNYHQDCEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWENGLTAMECALHLEKNVNQSLLELHKLATEKNDPHLCDFIETHYLDEQVK 143          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIH_TRENE (Ferritin, heavy subunit OS=Trematomus newnesi PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.318e-23
Identity = 58/139 (41.73%), Postives = 77/139 (55.40%), Query Frame = 3
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ +  +CEAAIN QIN+E   SY Y ++  YFDRD++AL G                   M+ QN RGG++ L  + +P    D  E G  L A+E AL LEK  N+ LL LH V   +NDP M  F+E+ +L EQV+
Sbjct:    6 RQNFHKDCEAAINRQINLELYASYSYLSMAYYFDRDDVALPGFAHFFKHQSEEEREHAEKLMKQQNQRGGRIFLQDVKKP----DRDEWGSGLDALECALQLEKNVNQSLLDLHKVCSEHNDPHMCDFLETHYLDEQVK 140          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIH_ECHGR (Ferritin heavy chain OS=Echinococcus granulosus PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.251e-23
Identity = 58/138 (42.03%), Postives = 78/138 (56.52%), Query Frame = 3
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQV 746
            RQ + +ECE  IN QIN+E   SY+Y A+  +FDRD++AL G                   M YQ  RGG++    I +P +     E    L AME+AL +E+  NE LL+L  VA++NND Q  +F+E EFLGEQV
Sbjct:    5 RQNFHEECERGINRQINMELYASYLYLAMSQHFDRDDVALPGFREFFAKASEEEREHAIKLMRYQCGRGGRIVYQDIAKPQT----TEWASGLEAMEMALKIEREVNESLLALRGVANKNNDSQFCEFLEGEFLGEQV 138          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIH1_XENLA (Ferritin heavy chain 1 OS=Xenopus laevis PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.401e-22
Identity = 57/139 (41.01%), Postives = 79/139 (56.83%), Query Frame = 3
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ +  +CEAAIN  +N+E   SYVY ++  YFDRD++AL  +                  ++YQN RGG+V L  I +P  +    E  + L AM+ AL LEK  N+ LL LH +A    DPQ+  F+ESE+L EQV+
Sbjct:    6 RQNFNSDCEAAINRMVNLEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQNKRGGRVVLQDIKKPERD----EWSNTLEAMQAALQLEKTVNQALLDLHKLASDKVDPQLCDFLESEYLEEQVK 140          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIH_HORSE (Ferritin heavy chain OS=Equus caballus GN=FTH1 PE=2 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 3.135e-22
Identity = 58/139 (41.73%), Postives = 78/139 (56.12%), Query Frame = 3
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ Y  + EAAIN QIN+E + SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +  + L AME AL LEK  NE LL LH +A   NDP +  F+E+ +L EQV+
Sbjct:   10 RQNYHQDSEAAINRQINLELHASYVYLSMSFYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DQDDWENGLKAMECALHLEKNVNESLLELHKLATDKNDPHLCDFLETHYLNEQVK 144          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIH_BOVIN (Ferritin heavy chain OS=Bos taurus GN=FTH1 PE=2 SV=3)

HSP 1 Score: 105.531 bits (262), Expect = 3.135e-22
Identity = 57/139 (41.01%), Postives = 77/139 (55.40%), Query Frame = 3
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ Y  + EAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +  + L AME AL LE+  N+ LL LH +A   NDP +  F+E+ +L EQVE
Sbjct:   10 RQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAERLMKLQNQRGGRIFLQDIKKP----DRDDWENGLTAMECALCLERSVNQSLLELHKLATEKNDPHLCDFIETHYLNEQVE 144          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIH_CRIGR (Ferritin heavy chain OS=Cricetulus griseus GN=FTH1 PE=2 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 5.348e-22
Identity = 57/139 (41.01%), Postives = 76/139 (54.68%), Query Frame = 3
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ Y  + EAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +    L AME AL LEK  N+ LL LH +A   NDP +  F+E+ +L EQV+
Sbjct:   15 RQNYHQDSEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWESGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVK 149          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIH_SALSA (Ferritin, heavy subunit OS=Salmo salar PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.985e-22
Identity = 55/139 (39.57%), Postives = 76/139 (54.68%), Query Frame = 3
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ +  +CEAAIN QIN+E   SYVY ++  YFDRD+ AL                     M+ QN RGG++ L  + +P  +    E G  + A+E +L LEK  N+ LL LH V   +NDP M  F+E+ +L EQV+
Sbjct:    6 RQNFHQDCEAAINRQINLELYASYVYLSMAYYFDRDDQALHNFAKFFKNQSHEEREHAEKLMKVQNQRGGRIFLQDVKKPEKD----EWGSGVEALESSLQLEKSVNQSLLDLHKVCSEHNDPHMCDFIETHYLDEQVK 140          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIH_MOUSE (Ferritin heavy chain OS=Mus musculus GN=Fth1 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 6.985e-22
Identity = 57/139 (41.01%), Postives = 76/139 (54.68%), Query Frame = 3
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ Y  + EAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +    L AME AL LEK  N+ LL LH +A   NDP +  F+E+ +L EQV+
Sbjct:   10 RQNYHQDAEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWESGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETYYLSEQVK 144          
The following BLAST results are available for this feature:
BLAST of CN186582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
FRIH_PAGBE4.837e-2341.01Ferritin, heavy subunit OS=Pagothenia bernacchii P... [more]
FRIH_CHICK4.837e-2341.73Ferritin heavy chain OS=Gallus gallus GN=FTH PE=2 ... [more]
FRIH_TRENE6.318e-2341.73Ferritin, heavy subunit OS=Trematomus newnesi PE=1... [more]
FRIH_ECHGR8.251e-2342.03Ferritin heavy chain OS=Echinococcus granulosus PE... [more]
FRIH1_XENLA2.401e-2241.01Ferritin heavy chain 1 OS=Xenopus laevis PE=2 SV=2[more]
FRIH_HORSE3.135e-2241.73Ferritin heavy chain OS=Equus caballus GN=FTH1 PE=... [more]
FRIH_BOVIN3.135e-2241.01Ferritin heavy chain OS=Bos taurus GN=FTH1 PE=2 SV... [more]
FRIH_CRIGR5.348e-2241.01Ferritin heavy chain OS=Cricetulus griseus GN=FTH1... [more]
FRIH_SALSA6.985e-2239.57Ferritin, heavy subunit OS=Salmo salar PE=2 SV=1[more]
FRIH_MOUSE6.985e-2241.01Ferritin heavy chain OS=Mus musculus GN=Fth1 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003C06_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186582 ID=CN186582; Name=CN186582; organism=Citrus sinensis; type=EST; length=749bp
AGTGGCCATTCTTCTTCATCAAATTCATTTGCTTTCTTCCTTCAATCTCC
ATTACGCACTTGCTTACATCAATGGCATTGGCAGCTTCTTCTTCCTCCTC
TCTTGCAGCGAAGCAACTGGCTGGTCTTATAACAAGCTCATCATGTTACA
CTAAGTCTACTGCTTCTCTTGTGAAATTGGGTTGTATTTCGCCGAGAACG
AAGAGGAGTCTGAAGGTTTCTGCTGCTGTGGACGCCAATAGCATGCCGCT
GACCGGGGTCGTGTTTCAGCCATTCGAAGAGGTCAAGAAAGAGGTTCTTG
ATGTTCCTGTTTCCCCTCTGCTTTCACTAGCTCGCCAAAAGTATGAGGAC
GAGTGTGAGGCCGCTATCAACGAGCAGATCAATGTGGAATATAATGTCTC
ATACGTGTACCATGCCCTGTATGCGTACTTTGATCGGGATAATATTGCTC
TGAGAGGCCTTGCCAAATTTTTCAAGGAGTCCAGTGAAGAAGAAAGGGAA
CATGCTGAGAAGTTTATGGAGTATCAGAACTTGCGCGGTGGAAAAGTAAA
ACTGCACTCCATAATGCAGCCCCCTTCGGAGTTTGATCATGCGGAGAAAG
GGGATGCCTTGTATGCAATGGAACTAGCATTGTCCCTGGAGAAGCTAACA
AACGAGAAGCTTCTGAGCCTGCACAGTGTGGCGGATAGAAACAATGATCC
CCAAATGGCAAAGTTTGTCGAGAGTGAATTTTTGGGTGAGCAGGTTGAA
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