CN186582

Overview
NameCN186582
Unique NameCN186582
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIH_FELCA (Ferritin heavy chain OS=Felis catus GN=FTH1 PE=2 SV=3)

HSP 1 Score: 104.375 bits (259), Expect = 6.985e-22
Identity = 57/139 (41.01%), Postives = 77/139 (55.40%), Query Frame = 3 
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ Y  + EAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +  + L AME AL LEK  N+ LL LH +A   NDP +  F+E+ +L EQV+
Sbjct:   10 RQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWENGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVK 144
[Close]
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIH_CANFA (Ferritin heavy chain OS=Canis familiaris GN=FTH1 PE=2 SV=3)

HSP 1 Score: 104.375 bits (259), Expect = 6.985e-22
Identity = 57/139 (41.01%), Postives = 77/139 (55.40%), Query Frame = 3 
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ Y  + EAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +  + L AME AL LEK  N+ LL LH +A   NDP +  F+E+ +L EQV+
Sbjct:   10 RQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWENGLNAMECALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVK 144
[Close]
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIH_HUMAN (Ferritin heavy chain OS=Homo sapiens GN=FTH1 PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 9.123e-22
Identity = 59/139 (42.45%), Postives = 78/139 (56.12%), Query Frame = 3 
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ Y  + EAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P  + D  E G  L AME AL LEK  N+ LL LH +A   NDP +  F+E+ +L EQV+
Sbjct:   10 RQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP--DCDDWESG--LNAMECALHLEKNVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVK 144
[Close]
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIH_TRIVU (Ferritin heavy chain OS=Trichosurus vulpecula GN=FTH1 PE=2 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 1.556e-21
Identity = 57/139 (41.01%), Postives = 76/139 (54.68%), Query Frame = 3 
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ Y  + EAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +    L AME AL LEK  N+ LL LH +A   NDP +  F+E+ +L EQV+
Sbjct:   10 RQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWESGLNAMECALHLEKNVNQSLLELHKLATDKNDPHLCDFIETHYLDEQVK 144
[Close]
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIH_SHEEP (Ferritin heavy chain OS=Ovis aries GN=FTH1 PE=1 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 1.556e-21
Identity = 56/139 (40.29%), Postives = 76/139 (54.68%), Query Frame = 3 
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ Y  + EAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RG ++ L  I +P    D  +  + L AME AL LE+  N+ LL LH +A   NDP +  F+E+ +L EQVE
Sbjct:   10 RQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAERLMKLQNQRGARIFLQDIKKP----DRDDWENGLNAMECALCLERSVNQSLLELHKLATEKNDPHLCDFIETHYLNEQVE 144
[Close]
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIH_PONAB (Ferritin heavy chain OS=Pongo abelii GN=FTH1 PE=2 SV=3)

HSP 1 Score: 103.219 bits (256), Expect = 1.556e-21
Identity = 59/139 (42.45%), Postives = 78/139 (56.12%), Query Frame = 3 
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ Y  + EAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P  + D  E G  L AME AL LEK  N+ LL LH +A   NDP +  F+E+ +L EQV+
Sbjct:   10 RQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP--DCDDWESG--LNAMECALHLEKNVNQSLLELHKLATDKNDPHLCDFLETHYLNEQVK 144
[Close]
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIH3_XENLA (Ferritin heavy chain, oocyte isoform OS=Xenopus laevis PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.556e-21
Identity = 54/139 (38.85%), Postives = 79/139 (56.83%), Query Frame = 3 
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ +  ECEAAIN Q+N+E   SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P    +  E  + L A+E +L LEK  N+ +L LH ++  +NDP +  F+ES +L EQV+
Sbjct:    6 RQNFHQECEAAINRQVNMELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKMQNQRGGRLFLQDIKKP----ERDEWANGLEALECSLQLEKNVNQSILELHKLSTDHNDPHLCDFLESHYLDEQVK 140
[Close]
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIH_RAT (Ferritin heavy chain OS=Rattus norvegicus GN=Fth1 PE=1 SV=3)

HSP 1 Score: 102.834 bits (255), Expect = 2.032e-21
Identity = 56/139 (40.29%), Postives = 75/139 (53.96%), Query Frame = 3 
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ Y  + EAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ QN RGG++ L  I +P    D  +    L AM  AL LEK  N+ LL LH +A   NDP +  F+E+ +L EQV+
Sbjct:   10 RQNYHQDSEAAINRQINLELYASYVYLSMSCYFDRDDVALKNFAKYFLHQSHEEREHAEKLMKLQNQRGGRIFLQDIKKP----DRDDWESGLNAMRCALHLEKSVNQSLLELHKLATDKNDPHLCDFIETHYLNEQVK 144
[Close]
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIM_SALSA (Ferritin, middle subunit OS=Salmo salar PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.723e-21
Identity = 54/139 (38.85%), Postives = 74/139 (53.24%), Query Frame = 3 
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ Y  +CE AIN  IN+E   SY Y ++  YF RD++AL G                   + +QN RGG++ L  I +P  +    E G+ L AM+ AL LEK  N+ LL LH +A    DP +  F+E+ +L EQVE
Sbjct:    6 RQNYHHDCERAINRMINMEMFASYTYTSMAFYFSRDDVALPGFAHFFKENSEEEREHADKLLSFQNKRGGRILLQDIKKPERD----EWGNGLEAMQCALQLEKNVNQALLDLHKIASDKVDPHLCDFLETHYLNEQVE 140
[Close]
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIH2_XENLA (Ferritin heavy chain 2 OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.723e-21
Identity = 55/139 (39.57%), Postives = 77/139 (55.40%), Query Frame = 3 
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ +  +CEAAIN  +N+E   SYVY ++  YFDRD++AL  +                  ++YQN RGG+V L  I +P    +  E G+ L A + AL LEK  N+ LL LH +A    D  +  F+ESE+L EQV+
Sbjct:    6 RQNFHSDCEAAINRMVNMEMYASYVYLSMSYYFDRDDVALHHVAKFFKEQSHEEREHAEKFLKYQNKRGGRVVLQDIKKP----ERDEWGNTLEATQAALQLEKTVNQALLDLHKLASDKVDAHLCDFLESEYLEEQVK 140
The following BLAST results are available for this feature:
BLAST of CN186582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
FRIH_FELCA6.985e-2241.01Ferritin heavy chain OS=Felis catus GN=FTH1 PE=2 S... [more]
FRIH_CANFA6.985e-2241.01Ferritin heavy chain OS=Canis familiaris GN=FTH1 P... [more]
FRIH_HUMAN9.123e-2242.45Ferritin heavy chain OS=Homo sapiens GN=FTH1 PE=1 ... [more]
FRIH_TRIVU1.556e-2141.01Ferritin heavy chain OS=Trichosurus vulpecula GN=F... [more]
FRIH_SHEEP1.556e-2140.29Ferritin heavy chain OS=Ovis aries GN=FTH1 PE=1 SV... [more]
FRIH_PONAB1.556e-2142.45Ferritin heavy chain OS=Pongo abelii GN=FTH1 PE=2 ... [more]
FRIH3_XENLA1.556e-2138.85Ferritin heavy chain, oocyte isoform OS=Xenopus la... [more]
FRIH_RAT2.032e-2140.29Ferritin heavy chain OS=Rattus norvegicus GN=Fth1 ... [more]
FRIM_SALSA7.723e-2138.85Ferritin, middle subunit OS=Salmo salar PE=2 SV=1[more]
FRIH2_XENLA7.723e-2139.57Ferritin heavy chain 2 OS=Xenopus laevis PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003C06_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186582 ID=CN186582; Name=CN186582; organism=Citrus sinensis; type=EST; length=749bp
AGTGGCCATTCTTCTTCATCAAATTCATTTGCTTTCTTCCTTCAATCTCC
ATTACGCACTTGCTTACATCAATGGCATTGGCAGCTTCTTCTTCCTCCTC
TCTTGCAGCGAAGCAACTGGCTGGTCTTATAACAAGCTCATCATGTTACA
CTAAGTCTACTGCTTCTCTTGTGAAATTGGGTTGTATTTCGCCGAGAACG
AAGAGGAGTCTGAAGGTTTCTGCTGCTGTGGACGCCAATAGCATGCCGCT
GACCGGGGTCGTGTTTCAGCCATTCGAAGAGGTCAAGAAAGAGGTTCTTG
ATGTTCCTGTTTCCCCTCTGCTTTCACTAGCTCGCCAAAAGTATGAGGAC
GAGTGTGAGGCCGCTATCAACGAGCAGATCAATGTGGAATATAATGTCTC
ATACGTGTACCATGCCCTGTATGCGTACTTTGATCGGGATAATATTGCTC
TGAGAGGCCTTGCCAAATTTTTCAAGGAGTCCAGTGAAGAAGAAAGGGAA
CATGCTGAGAAGTTTATGGAGTATCAGAACTTGCGCGGTGGAAAAGTAAA
ACTGCACTCCATAATGCAGCCCCCTTCGGAGTTTGATCATGCGGAGAAAG
GGGATGCCTTGTATGCAATGGAACTAGCATTGTCCCTGGAGAAGCTAACA
AACGAGAAGCTTCTGAGCCTGCACAGTGTGGCGGATAGAAACAATGATCC
CCAAATGGCAAAGTTTGTCGAGAGTGAATTTTTGGGTGAGCAGGTTGAA
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