CN186582

Overview
NameCN186582
Unique NameCN186582
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig121 contig Csv1_Contig121:1..745. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIL_XENLA (Ferritin light chain, oocyte isoform OS=Xenopus laevis PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.456e-19
Identity = 52/139 (37.41%), Postives = 77/139 (55.40%), Query Frame = 3
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ Y +E EA +N   N+E   SY+Y ++  YFDRD++AL                     +++QN RGG+V L  + +P    D  E G+   AME+AL+LEK  N+ +L LH +A  + DP M  ++E EFL E+V+
Sbjct:    8 RQNYHEESEAGVNRIANLELQASYLYLSVGYYFDRDDVALSKFSKFFRELSEKKRDHAEDFLKFQNKRGGRVVLQDVKKP----DDDEWGNGTKAMEVALNLEKSINQAVLDLHKIATDHTDPHMQDYLEHEFLEEEVK 142          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIL_RABIT (Ferritin light chain OS=Oryctolagus cuniculus GN=FTL PE=2 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.902e-19
Identity = 51/139 (36.69%), Postives = 74/139 (53.24%), Query Frame = 3
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ Y  E EAA+N  +N+    SY Y +L  YFDRD++AL G+                  ++ QN RGG+     + +P  +    E G  L AME AL+LEK  N+ LL LH++   + DP +  F+E+ FL E+V+
Sbjct:    6 RQNYSPEVEAAVNHLVNLHLRASYTYLSLGFYFDRDDVALEGVSHFFRELAEEKREAAERLLKMQNQRGGRALFQDVQKPSQD----EWGKTLNAMEAALALEKNLNQALLDLHALGSAHTDPHLCDFLENHFLDEEVK 140          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIH_PIG (Ferritin heavy chain OS=Sus scrofa GN=FTH1 PE=1 SV=3)

HSP 1 Score: 95.1301 bits (235), Expect = 4.238e-19
Identity = 56/139 (40.29%), Postives = 75/139 (53.96%), Query Frame = 3
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ Y  + EAAIN QIN+E   SYVY ++  YFDRD++AL+                    M+ Q  RG ++ L  IM+P  E D  E G  L AME AL + K   + LL LH +A   NDP +  F+E+ +L EQV+
Sbjct:   10 RQNYHQDSEAAINRQINLELYASYVYLSMSYYFDRDDVALKNFAKYFLHQSHGGRGHAEKLMKLQTQRGARIFLQDIMKP--ERDDWENG--LTAMEFALHVVKNVYQSLLELHKLATDKNDPHLCDFIETHYLHEQVK 144          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FTMT_MOUSE (Ferritin, mitochondrial OS=Mus musculus GN=Ftmt PE=2 SV=2)

HSP 1 Score: 93.9745 bits (232), Expect = 9.440e-19
Identity = 56/139 (40.29%), Postives = 75/139 (53.96%), Query Frame = 3
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ +  + EAAIN QIN+E   SYVY ++  YF RD++AL                     M+ QN RGG++ L  I +P    D  E G  L AME AL LEK  N+ LL LH++A    DP +  F+E+ +L EQV+
Sbjct:   65 RQNFHPDSEAAINRQINLELYASYVYLSMAYYFSRDDVALYNFSKYFLRQSLEEREHAEKLMKLQNQRGGRICLQDIKKPDK--DDWECG--LRAMECALLLEKNVNQSLLDLHTLASEKGDPHLCDFLETHYLHEQVK 199          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FTMT_BOVIN (Ferritin, mitochondrial OS=Bos taurus GN=FTMT PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.440e-19
Identity = 54/139 (38.85%), Postives = 72/139 (51.80%), Query Frame = 3
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ +  + EAAIN QIN+E   SYVY ++  YF RD++AL                     M  QN RGG + L  I +P    D  +    L AME AL LEK  N+ LL LH++A    DP +  F+E+ +L EQV+
Sbjct:   69 RQNFHPDSEAAINRQINLELYASYVYLSMAYYFSRDDVALHNFARYFLRLSREEAEHAEKLMRLQNQRGGLICLQDIKKP----DQNDWKSGLNAMECALLLEKNVNQSLLELHTLASDKGDPHLCDFLETHYLNEQVK 203          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRI_PACLE (Ferritin OS=Pacifastacus leniusculus PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.440e-19
Identity = 54/139 (38.85%), Postives = 76/139 (54.68%), Query Frame = 3
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            R  Y ++CE  IN+QIN+E+  SYVY ++  YFDRD+I+L G                   M+YQN RG ++ L +I  P  +    E G+   A++ AL LE   N+ LL L + A + NDP +   +E EFL EQVE
Sbjct:    6 RHNYHEDCEP-INKQINLEFYASYVYMSMGHYFDRDDISLPGASKFFKDSSDEEREHGQKLMKYQNKRGARIVLQAIAAPSLQ----EWGNLHDALQAALDLENEVNQSLLDLDATASKINDPHLTNMLEGEFLEEQVE 139          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIL_CANFA (Ferritin light chain OS=Canis familiaris GN=FTL PE=2 SV=3)

HSP 1 Score: 93.9745 bits (232), Expect = 9.440e-19
Identity = 51/139 (36.69%), Postives = 72/139 (51.80%), Query Frame = 3
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ Y  E EAA+N  +N+    SY Y +L  YFDRD++AL G+                  ++ QN RGG+     + +P  +    E G  L AME AL LEK  N+ LL LH++     DP +  F+E+ FL E+V+
Sbjct:    6 RQNYSTEVEAAVNRLVNMHLRASYTYLSLGFYFDRDDVALEGVGHFFRELAEEKREGAERFLKMQNQRGGRALFQDVQKPSQD----EWGKTLDAMEAALLLEKSLNQALLDLHALGSARADPHLCDFLENHFLDEEVK 140          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIL1_RAT (Ferritin light chain 1 OS=Rattus norvegicus GN=Ftl1 PE=1 SV=3)

HSP 1 Score: 93.5893 bits (231), Expect = 1.233e-18
Identity = 50/139 (35.97%), Postives = 73/139 (52.52%), Query Frame = 3
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ Y  E EAA+N  +N+    SY Y +L  +FDRD++AL G+                  ++ QN RGG+     + +P  +    E G  L AME AL+LEK  N+ LL LH++     DP +  F+ES FL ++V+
Sbjct:    6 RQNYSTEVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAERLLKLQNERGGRALFQDVQKPSQD----EWGKTLEAMEAALALEKNLNQALLDLHALGSARTDPHLCDFLESHFLDKEVK 140          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIL_FELCA (Ferritin light chain OS=Felis catus GN=FTL PE=2 SV=3)

HSP 1 Score: 92.0485 bits (227), Expect = 3.587e-18
Identity = 51/139 (36.69%), Postives = 72/139 (51.80%), Query Frame = 3
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ Y  E EAA+N  +N+    SY Y +L  YFDRD++AL G+                  ++ QN RGG+     + +P  +    E G  L AME AL LEK  N+ LL LH++     DP +  F+E+ FL E+V+
Sbjct:    6 RQNYSTEVEAAVNRLVNMHLRASYTYLSLGFYFDRDDVALEGVGHFFRELAEEKREGAERLLKMQNQRGGRALFLDVQKPSQD----EWGKTLDAMEAALLLEKNLNQGLLDLHALGSARADPHLCDFLENHFLDEEVK 140          
BLAST of CN186582 vs. ExPASy Swiss-Prot
Match: FRIL1_MOUSE (Ferritin light chain 1 OS=Mus musculus GN=Ftl1 PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.587e-18
Identity = 48/139 (34.53%), Postives = 73/139 (52.52%), Query Frame = 3
Query:  333 RQKYEDECEAAINEQINVEYNVSYVYHALYAYFDRDNIALRGLXXXXXXXXXXXXXXXXXXMEYQNLRGGKVKLHSIMQPPSEFDHAEKGDALYAMELALSLEKLTNEKLLSLHSVADRNNDPQMAKFVESEFLGEQVE 749
            RQ Y  E EAA+N  +N+    SY Y +L  +FDRD++AL G+                  +E+QN RGG+     + +P  +    E G    AME AL++EK  N+ LL LH++     DP +  F+ES +L ++V+
Sbjct:    6 RQNYSTEVEAAVNRLVNLHLRASYTYLSLGFFFDRDDVALEGVGHFFRELAEEKREGAERLLEFQNDRGGRALFQDVQKPSQD----EWGKTQEAMEAALAMEKNLNQALLDLHALGSARTDPHLCDFLESHYLDKEVK 140          
The following BLAST results are available for this feature:
BLAST of CN186582 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
FRIL_XENLA1.456e-1937.41Ferritin light chain, oocyte isoform OS=Xenopus la... [more]
FRIL_RABIT1.902e-1936.69Ferritin light chain OS=Oryctolagus cuniculus GN=F... [more]
FRIH_PIG4.238e-1940.29Ferritin heavy chain OS=Sus scrofa GN=FTH1 PE=1 SV... [more]
FTMT_MOUSE9.440e-1940.29Ferritin, mitochondrial OS=Mus musculus GN=Ftmt PE... [more]
FTMT_BOVIN9.440e-1938.85Ferritin, mitochondrial OS=Bos taurus GN=FTMT PE=2... [more]
FRI_PACLE9.440e-1938.85Ferritin OS=Pacifastacus leniusculus PE=1 SV=1[more]
FRIL_CANFA9.440e-1936.69Ferritin light chain OS=Canis familiaris GN=FTL PE... [more]
FRIL1_RAT1.233e-1835.97Ferritin light chain 1 OS=Rattus norvegicus GN=Ftl... [more]
FRIL_FELCA3.587e-1836.69Ferritin light chain OS=Felis catus GN=FTL PE=2 SV... [more]
FRIL1_MOUSE3.587e-1834.53Ferritin light chain 1 OS=Mus musculus GN=Ftl1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003C06_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003C06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186582 ID=CN186582; Name=CN186582; organism=Citrus sinensis; type=EST; length=749bp
AGTGGCCATTCTTCTTCATCAAATTCATTTGCTTTCTTCCTTCAATCTCC
ATTACGCACTTGCTTACATCAATGGCATTGGCAGCTTCTTCTTCCTCCTC
TCTTGCAGCGAAGCAACTGGCTGGTCTTATAACAAGCTCATCATGTTACA
CTAAGTCTACTGCTTCTCTTGTGAAATTGGGTTGTATTTCGCCGAGAACG
AAGAGGAGTCTGAAGGTTTCTGCTGCTGTGGACGCCAATAGCATGCCGCT
GACCGGGGTCGTGTTTCAGCCATTCGAAGAGGTCAAGAAAGAGGTTCTTG
ATGTTCCTGTTTCCCCTCTGCTTTCACTAGCTCGCCAAAAGTATGAGGAC
GAGTGTGAGGCCGCTATCAACGAGCAGATCAATGTGGAATATAATGTCTC
ATACGTGTACCATGCCCTGTATGCGTACTTTGATCGGGATAATATTGCTC
TGAGAGGCCTTGCCAAATTTTTCAAGGAGTCCAGTGAAGAAGAAAGGGAA
CATGCTGAGAAGTTTATGGAGTATCAGAACTTGCGCGGTGGAAAAGTAAA
ACTGCACTCCATAATGCAGCCCCCTTCGGAGTTTGATCATGCGGAGAAAG
GGGATGCCTTGTATGCAATGGAACTAGCATTGTCCCTGGAGAAGCTAACA
AACGAGAAGCTTCTGAGCCTGCACAGTGTGGCGGATAGAAACAATGATCC
CCAAATGGCAAAGTTTGTCGAGAGTGAATTTTTGGGTGAGCAGGTTGAA
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