CN186578

Overview
NameCN186578
Unique NameCN186578
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186578 vs. ExPASy Swiss-Prot
Match: ERDL5_ARATH (Sugar transporter ERD6-like 5 OS=Arabidopsis thaliana GN=At1g54730 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.082e-13
Identity = 36/100 (36.00%), Postives = 59/100 (59.00%), Query Frame = -3
Query:  257 WLALVGLALYIIFFSPGMGTAPWIVNSEIYPLRFRGVCGGIAATANWISNLIVAQSFLSLTQAIGTSWTFLIFGVISVAALLFVLIFVPETKGLPIEEIE 556
            +LAL G+ +Y   FS GMG  PW++ SEI+P+  +G  G +    +W+ + I++ +F +       + TF +F  +  A ++FV   VPETKG  +EEI+
Sbjct:  364 YLALTGVLVYTGSFSLGMGGIPWVIMSEIFPIDIKGSAGSLVTVVSWVGSWIISFTF-NFLMNWNPAGTFYVFATVCGATVIFVAKLVPETKGRTLEEIQ 462          
BLAST of CN186578 vs. ExPASy Swiss-Prot
Match: XYLT_LACBR (D-xylose-proton symporter OS=Lactobacillus brevis GN=xylT PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.720e-13
Identity = 36/105 (34.29%), Postives = 61/105 (58.10%), Query Frame = -3
Query:  239 LALVGLALYIIFFSPGMGTAPWIVNSEIYPLRFRGVCGGIAATANWISNLIVAQSFLSLTQAIGTSWTFLIFGVISVAALLFVLIFVPETKGLPIEEIEKMLELR 553
            ++++ L +YI FFS   G   W++  E++PL  RG+    A+  NW +N+IV+ +F SL    GT   F+ +G++  A++ FV   V ET+   +E+IE  L  +
Sbjct:  341 ISVIALTVYIAFFSATWGPVMWVMIGEVFPLNIRGLGNSFASVINWTANMIVSLTFPSLLDFFGTGSLFIGYGILCFASIWFVQKKVFETRNRSLEDIEATLRAK 445          
BLAST of CN186578 vs. ExPASy Swiss-Prot
Match: XYLL1_ARATH (D-xylose-proton symporter-like 1 OS=Arabidopsis thaliana GN=At3g03090 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.552e-13
Identity = 39/99 (39.39%), Postives = 57/99 (57.58%), Query Frame = -3
Query:  257 LALVGLALYIIFFSPGMGTAPWIVNSEIYPLRFRGVCGGIAATANWISNLIVAQSFLSLTQAIGTSWTFLIFGVISVAALLFVLIFVPETKGLPIEEIE 553
            +A+  L LY+  +    G   W++ SEI+PL+ RG    +A   N+ +N +V  +F  L + +G    F  FGVI V +L F+   VPETKGL +EEIE
Sbjct:  401 VAVAALLLYVGCYQLSFGPIGWLMISEIFPLKLRGRGISLAVLVNFGANALVTFAFSPLKELLGAGILFCAFGVICVVSLFFIYYIVPETKGLTLEEIE 499          
BLAST of CN186578 vs. ExPASy Swiss-Prot
Match: ITR2_YEAST (Myo-inositol transporter 2 OS=Saccharomyces cerevisiae GN=ITR2 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.552e-13
Identity = 36/108 (33.33%), Postives = 62/108 (57.41%), Query Frame = -3
Query:  245 SKFGWLALVGLALYIIFFSPGMGTAPWIVNSEIYPLRFRGVCGGIAATANWISNLIVAQSFLSLTQAIGTSWTFLIFGVISVAALLFVLIFVPETKGLPIEEIEKMLE 568
            S +G + +V + +Y  F++ G+GT PW   SE++P   RGV    A   NW  +L++A +FL++ Q I  + TF  F  ++  + +F     PE  GL +EE++ +L+
Sbjct:  464 SSWGIVIIVFIIVYAAFYALGIGTVPW-QQSELFPQNVRGVGTSYATATNWAGSLVIASTFLTMLQNITPTGTFSFFAGVACLSTIFCYFCYPELSGLELEEVQTILK 570          
BLAST of CN186578 vs. ExPASy Swiss-Prot
Match: EDL17_ARATH (Sugar transporter ERD6-like 17 OS=Arabidopsis thaliana GN=SFP1 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 3.552e-13
Identity = 40/102 (39.22%), Postives = 61/102 (59.80%), Query Frame = -3
Query:  248 LALVGLALYIIFFSPGMGTAPWIVNSEIYPLRFRGVCGGIAATANWISNLIVAQSFLSLTQAIGTSWTFLIFGVISVAALLFVLIFVPETKGLPIEEIEKML 553
            L+ + + +YI  ++ G+G  PW++ SEI+P+  +   G I    ++ S+ IV  +F  L +   T  TF IF  I  AALLF+ + VPETKGL +EEI+  L
Sbjct:  364 LSFICVMMYIATYAIGLGGLPWVIMSEIFPINIKVTAGSIVTLVSFSSSSIVTYAFNFLFE-WSTQGTFFIFAGIGGAALLFIWLLVPETKGLSLEEIQVSL 464          
BLAST of CN186578 vs. ExPASy Swiss-Prot
Match: ERD6_ARATH (Sugar transporter ERD6 OS=Arabidopsis thaliana GN=ERD6 PE=1 SV=3)

HSP 1 Score: 75.0998 bits (183), Expect = 4.639e-13
Identity = 34/99 (34.34%), Postives = 60/99 (60.61%), Query Frame = -3
Query:  248 VGLALYIIFFSPGMGTAPWIVNSEIYPLRFRGVCGGIAATANWISNLIVAQSFLSLTQAIGTSWTFLIFGVISVAALLFVLIFVPETKGLPIEEIEKML 544
            +G+  +I+ F+ GMG  PWI+ +EI+P+  +   G +    NW+   I+  +F  + +    S  FLIF ++S ++++F+   VPETKG  +EEI+ +L
Sbjct:  394 IGVLGHIVSFAMGMGGLPWIIMAEIFPMNVKVSAGTLVTVTNWLFGWIITYTFNFMLE-WNASGMFLIFSMVSASSIVFIYFLVPETKGRSLEEIQALL 491          
BLAST of CN186578 vs. ExPASy Swiss-Prot
Match: ITR1_YEAST (Myo-inositol transporter 1 OS=Saccharomyces cerevisiae GN=ITR1 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 6.059e-13
Identity = 35/108 (32.41%), Postives = 62/108 (57.41%), Query Frame = -3
Query:  245 SKFGWLALVGLALYIIFFSPGMGTAPWIVNSEIYPLRFRGVCGGIAATANWISNLIVAQSFLSLTQAIGTSWTFLIFGVISVAALLFVLIFVPETKGLPIEEIEKMLE 568
            S +G + +V + ++  F++ G+GT PW   SE++P   RG+    A   NW  +L++A +FL++ Q I  + TF  F  +S  + +F     PE  GL +EE++ +L+
Sbjct:  441 SSWGIVIIVFIIVFAAFYALGIGTVPW-QQSELFPQNVRGIGTSYATATNWAGSLVIASTFLTMLQNITPAGTFAFFAGLSCLSTIFCYFCYPELSGLELEEVQTILK 547          
BLAST of CN186578 vs. ExPASy Swiss-Prot
Match: PLT1_ARATH (Putative polyol transporter 1 OS=Arabidopsis thaliana GN=PLT1 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.033e-12
Identity = 34/101 (33.66%), Postives = 59/101 (58.42%), Query Frame = -3
Query:  251 LALVGLALYIIFFSPGMGTAPWIVNSEIYPLRFRGVCGGIAATANWISNLIVAQSFLSLTQAIGTSWTFLIFGVISVAALLFVLIFVPETKGLPIEEIEKM 553
            LA+  +  ++  FS G G   W+  SEI+P+R R     +    N + + I+  +FLSL++ +     FL+F  ++ AA +F   F+PET+G+P+EE+E +
Sbjct:  388 LAVTTVMTFVATFSIGAGPVTWVYCSEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGGAFLLFAGVAAAAWVFFFTFLPETRGIPLEEMETL 488          
BLAST of CN186578 vs. ExPASy Swiss-Prot
Match: EDL15_ARATH (Sugar transporter ERD6-like 15 OS=Arabidopsis thaliana GN=At4g04760 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.033e-12
Identity = 40/101 (39.60%), Postives = 58/101 (57.43%), Query Frame = -3
Query:  251 LALVGLALYIIFFSPGMGTAPWIVNSEIYPLRFRGVCGGIAATANWISNLIVAQSFLSLTQAIGTSWTFLIFGVISVAALLFVLIFVPETKGLPIEEIEKM 553
            LAL  + +Y   +  GMG+ PWI+ SEIYP+  +G  G +    + IS  +VA SF  L Q   T  TFL+F  ++    +F+   VPETKG  +EEI+ +
Sbjct:  367 LALFSVMVYFGSYGSGMGSIPWIIASEIYPVDVKGAAGTMCNLVSSISAWLVAYSFSYLLQWSSTG-TFLMFATVAGLGFVFIAKLVPETKGKSLEEIQSL 466          
BLAST of CN186578 vs. ExPASy Swiss-Prot
Match: YFIG_BACSU (Putative metabolite transport protein yfiG OS=Bacillus subtilis GN=yfiG PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.350e-12
Identity = 35/92 (38.04%), Postives = 56/92 (60.87%), Query Frame = -3
Query:  257 LYIIFFSPGMGTAPWIVNSEIYPLRFRGVCGGIAATANWISNLIVAQSFLSLTQAIGTSWTFLIFGVISVAALLFVLIFVPETKGLPIEEIE 532
            L++ F    + T  W++ SEI+P+  RG+  GI+    W +N ++  +F  L   IG S TF IF  +++ A+LFV  +VPETKG  +E++E
Sbjct:  369 LFLAFQQTAISTVTWLMLSEIFPMHVRGLGMGISTFCLWTANFLIGFTFPILLNHIGMSATFFIFVAMNILAILFVKKYVPETKGRSLEQLE 460          
The following BLAST results are available for this feature:
BLAST of CN186578 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 85
Match NameE-valueIdentityDescription
ERDL5_ARATH2.082e-1336.00Sugar transporter ERD6-like 5 OS=Arabidopsis thali... [more]
XYLT_LACBR2.720e-1334.29D-xylose-proton symporter OS=Lactobacillus brevis ... [more]
XYLL1_ARATH3.552e-1339.39D-xylose-proton symporter-like 1 OS=Arabidopsis th... [more]
ITR2_YEAST3.552e-1333.33Myo-inositol transporter 2 OS=Saccharomyces cerevi... [more]
EDL17_ARATH3.552e-1339.22Sugar transporter ERD6-like 17 OS=Arabidopsis thal... [more]
ERD6_ARATH4.639e-1334.34Sugar transporter ERD6 OS=Arabidopsis thaliana GN=... [more]
ITR1_YEAST6.059e-1332.41Myo-inositol transporter 1 OS=Saccharomyces cerevi... [more]
PLT1_ARATH1.033e-1233.66Putative polyol transporter 1 OS=Arabidopsis thali... [more]
EDL15_ARATH1.033e-1239.60Sugar transporter ERD6-like 15 OS=Arabidopsis thal... [more]
YFIG_BACSU1.350e-1238.04Putative metabolite transport protein yfiG OS=Baci... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003C04_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003C04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186578 ID=CN186578; Name=CN186578; organism=Citrus sinensis; type=EST; length=759bp
TTTTTTTAACAACTGTAATAATTAACCCCTATGTCCCAGAAAGTCTTGAA
TATTTTTATTTTATTAGGAGGCCTTTCCCAGGTACAGAATATTACATCTC
TAAGGAACTCCACTGAACAATATCCAGGATTTGCTATTGAGATTTCTGCT
TATAAAACTTCTGAAAAAAAAATATATATCACACAGATTGGCTCTTGTCC
GGTAGGGATCTCTTCTCCCAGAACTTGAAATGCAGAGCTCTTAGCTCCAG
CATCTTTTCAATTTCCTCAATGGGAAGTCCCTTAGTTTCCGGAACAAAAA
TCAGTACAAAGAGCAAGGCTGCAACAGAAATTACACCAAATATCAGAAAT
GTCCAGGATGTTCCGATTGCCTGTGTCAAAGATAGGAAGGATTGTGCCAC
GATGAGGTTAGATATCCAGTTTGCAGTGGCGGCTATTCCTCCACATACCC
CTCGGAAACGTAAAGGATAGATCTCAGAATTCACAATCCATGGCGCCGTT
CCCATTCCAGGAGAGAAAAATATAATGTAGAGTGCCAAGCCAACCAGAGC
GAGCCATCCAAATTTGCTCGGGCATCCCCTTGTGTACCATTCCCTGCTCT
CATCATGGCAGAGATCCTTCACTGTGCTATTTGAGATCAAACATGCTCCA
GGAAATAGCTTATTGGAATGTGAAGCACAGAACCCACAGTCTGGAGATGA
AGCCTTCAAACACTTCATACAATCCCACCTATCAGCAGTTGCAGCTGAAC
TATAATCCG
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