CN186574
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186574 vs. ExPASy Swiss-Prot
Match: HS22M_PEA (Heat shock 22 kDa protein, mitochondrial OS=Pisum sativum GN=HSP22 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 5.543e-14 Identity = 59/173 (34.10%), Postives = 84/173 (48.55%), Query Frame = -3 Query: 115 DVHVNSGNQGTQVERRPRRTALDISPFGLMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLFXXXXXXXXXXXXXVIKGEHRAEEA-----GGASFSSYDTRLQLPDNCEK-DKVKAELKNGVLYISIPKTKVERK--VIDVQI 609 D H + N PR D+ + DP P R++ Q+L+ +D LL D SR G WD +E E+ + +R DMPGL IKGE A+E+ G FSS R+ LP+ K D +KAE+KNGVL +++PK K E + VI+V++ Sbjct: 41 DQHSDDRNVDVYRHSFPRTRRDDLLLSDVFDPFSPPRSLSQVLNMVD-LLTDNPVLSAASRRG--------WDARETEDALFLRLDMPGLGKEDVKISVEQNTLTIKGEEGAKESEEKEKSGRRFSS---RIDLPEKLYKIDVIKAEMKNGVLKVTVPKMKEEERNNVINVKV 201
BLAST of CN186574 vs. ExPASy Swiss-Prot
Match: HS24M_ORYSJ (24.1 kDa heat shock protein, mitochondrial OS=Oryza sativa subsp. japonica GN=HSP24.1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.575e-11 Identity = 52/150 (34.67%), Postives = 75/150 (50.00%), Query Frame = -3 Query: 133 RRPRRTALDISPFG--LMDPSFPTRTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLFXXXXXXXXXXXXXVIKGEHRAE--EAGGASFSSYDTRLQL-PDNCEKDKVKAELKNGVLYISIPKTKVERK 567 RRP R A + F DP +++ ++L MD L GR+ G +R W+ KE E + +R DMPGL VIKGE E E GA+ + Y R++L P+ D++KAE+KNGVL + +PK K E++ Sbjct: 69 RRPTRDATMPAFFSDVFRDPFSAPQSLGRLLSLMDDLATPA----GRA---GAATLRRGWNAKESEEALHLRVDMPGLGKEHVKVWAEQNSLVIKGEGEKEAGEDEGAAPARYSGRIELAPEVYRMDQIKAEMKNGVLKVVVPKVKEEQR 211
BLAST of CN186574 vs. ExPASy Swiss-Prot
Match: HS26M_ARATH (26.5 kDa heat shock protein, mitochondrial OS=Arabidopsis thaliana GN=HSP26.5 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.363e-11 Identity = 57/192 (29.69%), Postives = 91/192 (47.40%), Query Frame = -3 Query: 133 AQAGGENKD---TSVDVHVNSGNQGTQVERRPRRTAL-DISPFGLMDPSF-----PT--RTMRQMLDTMDRLLEDTMAFPGRSRAGGGGQVRTPWDIKEEENEIKMRFDMPGLFXXXXXXXXXXXXXVIKGEHRAEEAGGA----------SFSSYDTRLQLPDNCEKDKVKAELKNGVLYISIPKTKVERK 645 A + GE +D T V V + RR R++ + G P+ PT T+ Q + M+R+ ++ P + GQV KE+++ K+R+++PGL IKG+H+AEE G+ S+ Y+T L LPD+ + + +KAELKNGVL + IP+T+ +K Sbjct: 43 ATSAGEQEDKMNTEVSVSEKKSPRQNFPRRRGRKSLWRNTDDHGYFTPTLNEFFPPTIGNTLIQATENMNRIFDNFNVNPFQLM----GQV------KEQDDCYKLRYEVPGLTKEDVKITVNDGILTIKGDHKAEEEKGSPEEDEYWSSKSYGYYNTSLSLPDDAKVEDIKAELKNGVLNLVIPRTEKPKK 224 The following BLAST results are available for this feature:
BLAST of CN186574 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186574 ID=CN186574; Name=CN186574; organism=Citrus sinensis; type=EST; length=656bpback to top |