CN186544
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186544 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.787e-13 Identity = 38/77 (49.35%), Postives = 56/77 (72.73%), Query Frame = -1 Query: 515 EYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLNK 745 E+ KLKAR E LQR+Q++ +GE+L L+ KEL++LE QLD +LK IRS + Q M ++++ LQ K++ L E N L+K Sbjct: 94 EHRKLKARLEVLQRNQKHYVGEDLESLSMKELQNLEHQLDSALKHIRSRKNQLMHESISVLQKKDRALQEQNNQLSK 170
BLAST of CN186544 vs. ExPASy Swiss-Prot
Match: AGL8_ARATH (Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana GN=AGL8 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.639e-13 Identity = 36/77 (46.75%), Postives = 56/77 (72.73%), Query Frame = -1 Query: 515 EYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLNK 745 E+ KLKAR E L++++RN +GE+L L+ KEL+SLE QLD ++K IRS + Q M ++++ LQ K++ L + N +L K Sbjct: 94 EHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLDAAIKSIRSRKNQAMFESISALQKKDKALQDHNNSLLK 170
BLAST of CN186544 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.806e-12 Identity = 35/77 (45.45%), Postives = 55/77 (71.43%), Query Frame = -1 Query: 515 EYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLNK 745 E+ KLKAR E L++++RN +GE+L L+ KEL+SLE QL ++K IRS + Q M ++++ LQ K+++L + N L K Sbjct: 94 EHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLEHQLHAAIKSIRSRKNQAMFESISALQKKDKVLQDHNNALLK 170
BLAST of CN186544 vs. ExPASy Swiss-Prot
Match: AGL13_ARATH (Agamous-like MADS-box protein AGL13 OS=Arabidopsis thaliana GN=AGL13 PE=2 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 5.255e-12 Identity = 35/77 (45.45%), Postives = 54/77 (70.13%), Query Frame = -1 Query: 521 QQEYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTL 751 +QE KLK +YE+L R+ RNL+GE+L ++ KEL++LERQL+ +L R +TQ M++ + EL+ KE+ L + N L Sbjct: 89 RQEVTKLKCKYESLLRTHRNLVGEDLEGMSIKELQTLERQLEGALSATRKQKTQVMMEQMEELRRKERELGDINNKL 165
BLAST of CN186544 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.608e-11 Identity = 36/77 (46.75%), Postives = 53/77 (68.83%), Query Frame = -1 Query: 515 EYLKLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHKEQLLSEANKTLNK 745 E KLKAR E LQR+++ +GE+L LN KEL++LE QL +LK IRS + Q M ++++ LQ +++ L E N L+K Sbjct: 94 ENAKLKARLEVLQRNEKLYVGEDLESLNMKELQNLEHQLASALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSK 170 The following BLAST results are available for this feature:
BLAST of CN186544 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186544 ID=CN186544; Name=CN186544; organism=Citrus sinensis; type=EST; length=772bpback to top |