CN186543

Overview
NameCN186543
Unique NameCN186543
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length710
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186543 vs. ExPASy Swiss-Prot
Match: ARGD_METJA (Acetylornithine aminotransferase OS=Methanocaldococcus jannaschii GN=argD PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.051e-28
Identity = 72/190 (37.89%), Postives = 104/190 (54.74%), Query Frame = 1
Query:  139 INLEYEYSAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEP 708
            I+LE +Y    Y  +P+V  + KG  ++D +G KYLDFL+     N GHCHPK+++A+++QAE L  +S  +Y       A++L  + G D     N+GAE  E A+K ARK  YV K    +   I+S    FHGRTL  ++ +   +   GF PL PG   V F DI AL++      D+ A  + EP
Sbjct:    7 IDLEKKYHLQIYGRLPVVLVEGKGMEVYDIDGKKYLDFLAGIGVNNVGHCHPKVVEAIKKQAETLIHTSNIYYTIPQIKLAKKLVELSGLDRAFFCNSGAEANEGAIKFARK--YVSKVLGREGGEIISMYNAFHGRTLTTLAATPKPKYQDGFYPLPPGFKYVPFNDIEALKEAIT---DKTAAIMIEP 191          
BLAST of CN186543 vs. ExPASy Swiss-Prot
Match: ARGD2_PSESM (Acetylornithine aminotransferase 2 OS=Pseudomonas syringae pv. tomato GN=argD2 PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 5.586e-26
Identity = 69/180 (38.33%), Postives = 104/180 (57.78%), Query Frame = 1
Query:  172 YHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPG-HLKVDFGDITALEKIFKESGDQIAGFLFEP 708
            Y P+ + F++  G+ +WD  G +YLD ++  +  N GH HP ++ A+++QA  L  +S  +  D     A++LT + G D V   N+GAE  ETALKLAR  G+ K    I++ ++V     FHGRTL  ++ S D  A+R     LPG ++KV FGD+ A +K+    G +IA  L EP
Sbjct:   10 YQPLALSFTRGLGTRLWDQSGREYLDAVAGVAVTNVGHSHPMLVDAIRDQAGLLLHTSNLYSIDWQQRLAQKLTRLAGMDRVFFNNSGAEANETALKLARLHGWHK---YIEQPLVVVMENAFHGRTLGTLAAS-DGPAVRLSYSDLPGDYIKVPFGDLLAFDKVCVTHGHRIAAVLVEP 185          
BLAST of CN186543 vs. ExPASy Swiss-Prot
Match: ARGD_THETN (Acetylornithine aminotransferase OS=Thermoanaerobacter tengcongensis GN=argD PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 9.528e-26
Identity = 65/190 (34.21%), Postives = 103/190 (54.21%), Query Frame = 1
Query:  136 LINLEYEYSAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFE 705
            +I  E +Y    Y+  PI+  + +G+ +WD EGN YLDF++  +  + GHCHP +++A+++QAE L   S  ++N+K    A  ++       V   N+GAE  E A+KLARK  Y   K+      I++    FHGRT  A++ +   +  +GFGPLL G   V   DI AL   ++   D++   + E
Sbjct:    1 MITYEKKYLMDTYNRYPIMLVKGEGTRVWDSEGNAYLDFVAGIAVNSLGHCHPALVEAIKKQAETLIHCSNLYWNEKQIELARMISENSFGGKVFFANSGAEANEGAIKLARK--YASLKYGGKRYKIITAKNSFHGRTFGALTATGQEKYHKGFGPLLAGFKYVPLNDIEAL---YEAVDDEVCAIMLE 185          
BLAST of CN186543 vs. ExPASy Swiss-Prot
Match: ARGD_NITEU (Acetylornithine aminotransferase OS=Nitrosomonas europaea GN=argD PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.772e-25
Identity = 61/175 (34.86%), Postives = 100/175 (57.14%), Query Frame = 1
Query:  166 HNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIA 690
            + Y  +P+ F + +G  +WD +GN+YLD LS  +    GHCHP ++KAL EQ   L  +S  ++       A+RLTS+ G +     N+GAE  E A+KLAR +G+ +    I+   I+     FHGRT+A ++ + + +   GF PLL G ++V + D+ A+ K+   + + +A
Sbjct:    6 NTYARLPVTFVKGEGVWLWDDQGNRYLDALSGIAVCGVGHCHPVLVKALCEQVSTLIHTSNVYHIQHQERLADRLTSLSGLEKAFFCNSGAEANEAAIKLARLYGHNQ---GINLPTIIVMERSFHGRTMATLTATGNRKTQAGFEPLLTGFVRVPYDDLEAVNKVAANNREIVA 177          
BLAST of CN186543 vs. ExPASy Swiss-Prot
Match: ARGD_BACAN (Acetylornithine aminotransferase OS=Bacillus anthracis GN=argD PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.772e-25
Identity = 64/162 (39.51%), Postives = 84/162 (51.85%), Query Frame = 1
Query:  187 IVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKE 672
            + F +  G+ + D  G +YLDF S     N GHCHP +MKA+QEQ   +   S  F N      A  LT     D V   N+GAE  E ALKLARK           ++++V+C   FHGRT   +S +  N+   GFGPLLP  L   F DI AL+++  E
Sbjct:   14 VEFVKGNGTKVIDNNGKQYLDFTSGIGVCNLGHCHPTVMKAVQEQLNDIWHISNLFTNSLQEEVASLLTENIALDYVFFCNSGAEANEAALKLARK--------HTGKSLVVTCEQSFHGRTFGTMSATGQNKVKEGFGPLLPSFLHTPFNDIKALKEVMNE 167          
BLAST of CN186543 vs. ExPASy Swiss-Prot
Match: ARGD_METTH (Acetylornithine aminotransferase OS=Methanobacterium thermoautotrophicum GN=argD PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.066e-25
Identity = 67/191 (35.08%), Postives = 102/191 (53.40%), Query Frame = 1
Query:  136 LINLEYEYSAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEP 708
            +I LE ++    Y   PIV S  KG+++WD EGN Y+D  +  +  + GH HPK+  A+  QA++L  SS  +Y  +    A+ LT++  +D V   N+GAE  E A+KLARK+          ++ I++    FHGRTLA ++ +   +    F PL  G   V +GDI A+       GD+ A  + EP
Sbjct:    6 IIELERKFIMQTYTRQPIVLSHGKGATVWDIEGNSYIDCFAGVAVNSIGHAHPKVALAICHQAQRLIHSSNIYYTREQVELAKLLTAISPHDRVFFANSGAEANEGAIKLARKF--------TGKSEIIAAENSFHGRTLATVTATGQKKYSEPFRPLPEGFKHVPYGDIGAMADAV---GDETAAIILEP 185          
BLAST of CN186543 vs. ExPASy Swiss-Prot
Match: ARGD_BACCR (Acetylornithine aminotransferase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=argD PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 8.066e-25
Identity = 63/162 (38.89%), Postives = 86/162 (53.09%), Query Frame = 1
Query:  187 IVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKE 672
            I F +  G+ + D +G +YLDF S     N GHCHP ++K +QEQ + +   S  F N      A  LT     D V   N+GAE  E ALKLARK           ++++V+C   FHGRT   +S +  ++   GFGPLLP  L + F DI ALE++  E
Sbjct:   14 IEFVKGTGTKVIDNKGKEYLDFTSGIGVCNLGHCHPTVLKGVQEQLDDIWHISNLFTNSLQEEVASLLTENRALDYVFFCNSGAEANEAALKLARK--------HTGKSLVVTCQQSFHGRTFGTMSATGQDKVKEGFGPLLPSFLHIPFNDIKALEEVMNE 167          
BLAST of CN186543 vs. ExPASy Swiss-Prot
Match: ARGD_NEIMA (Acetylornithine aminotransferase OS=Neisseria meningitidis serogroup A GN=argD PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.918e-24
Identity = 65/184 (35.33%), Postives = 93/184 (50.54%), Query Frame = 1
Query:  157 YSAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEP 708
            Y   N+   P++  +A GS +WD EG +Y+DF    +    GHCHP ++ AL  Q  KL   S  +        A++L +    D V   N+G+E  E ALKLARK  Y + +F   ++ IV+C   FHGRTL  +S+    +  + + PL  G   V F DI ALE      G+Q    + EP
Sbjct:    4 YLTPNFAFAPMIPERASGSRVWDTEGREYIDFSGGIAVNALGHCHPALVDALNAQMHKLWHISNIYTTRPAQELAQKLVANSFADKVFFCNSGSEANEAALKLARK--YARDRFGGGKSEIVACINSFHGRTLFTVSVGGQPKYSKDYAPLPQGITHVPFNDIAALEAAV---GEQTCAVIIEP 182          
BLAST of CN186543 vs. ExPASy Swiss-Prot
Match: ARGD_XANCP (Acetylornithine aminotransferase OS=Xanthomonas campestris pv. campestris GN=argD PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.521e-23
Identity = 67/180 (37.22%), Postives = 96/180 (53.33%), Query Frame = 1
Query:  172 YHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGY-DMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEKIFKESGDQIAGFLFEP 708
            Y P  +V  + +GS +WD +G +YLD  S  +    GH  P +M AL EQA KL  +S  F++      AE L +   +   V   N+G E  E A+KL RKW   + +   D+ +IV+  G FHGRTLA+++ +   +   G+ PL  G   VDF D+ ALE     SGD +A  + EP
Sbjct:   19 YRPRQVVLERGQGSRVWDDQGREYLDLSSGIAVSGLGHNDPDLMAALTEQAGKLWHTSNVFFSAPPLKLAEELVTASRFAQKVFLCNSGTEANEAAIKLVRKWASSQGR-PADKRVIVTFRGSFHGRTLASVTATAQPKYQEGYEPLPGGFRYVDFNDVPALESAM-ASGD-VAAVMLEP 195          
BLAST of CN186543 vs. ExPASy Swiss-Prot
Match: ARGD_SYNY3 (Acetylornithine aminotransferase OS=Synechocystis sp. (strain PCC 6803) GN=argD PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.987e-23
Identity = 61/187 (32.62%), Postives = 99/187 (52.94%), Query Frame = 1
Query:  157 YSAHNYHPVPIVFSQAKGSSIWDPEGNKYLDFLSAYSAVNQGHCHPKIMKALQEQAEKLTLSSRAFYNDKFPVFAERLTSMFGYDMVLPMNTGAEGVETALKLARKWGYVKKKFSIDEAIIVSCCGCFHGRTLAAISMSCDNEAIRGFGPLLPGHLKVDFGDITALEK---IFKESGDQIAGFLFEP 708
            Y  + Y   PI  ++ +GS++WD EG  YLDF++  +    GH HP +++A+ +Q +KL   S  +Y  +    A+ +      D V   N+GAE  E A+KL RK+ +    F +++ +I++    FHGRTLA I+ +   +  + F PL+PG   V + DI +LE       E   ++A    EP
Sbjct:   34 YVMNTYGRFPIAIARGQGSTLWDTEGKSYLDFVAGIATCTLGHAHPALVRAVSDQIQKLHHVSNLYYIPEQGELAKWIVEHSCADRVFFCNSGAEANEAAIKLVRKYAHTVLDF-LEQPVILTAKASFHGRTLATITATGQPKYQQYFDPLVPGFDYVPYNDIRSLENKVADLDEGNSRVAAIFLEP 219          
The following BLAST results are available for this feature:
BLAST of CN186543 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 459
Match NameE-valueIdentityDescription
ARGD_METJA2.051e-2837.89Acetylornithine aminotransferase OS=Methanocaldoco... [more]
ARGD2_PSESM5.586e-2638.33Acetylornithine aminotransferase 2 OS=Pseudomonas ... [more]
ARGD_THETN9.528e-2634.21Acetylornithine aminotransferase OS=Thermoanaeroba... [more]
ARGD_NITEU2.772e-2534.86Acetylornithine aminotransferase OS=Nitrosomonas e... [more]
ARGD_BACAN2.772e-2539.51Acetylornithine aminotransferase OS=Bacillus anthr... [more]
ARGD_METTH8.066e-2535.08Acetylornithine aminotransferase OS=Methanobacteri... [more]
ARGD_BACCR8.066e-2538.89Acetylornithine aminotransferase OS=Bacillus cereu... [more]
ARGD_NEIMA8.918e-2435.33Acetylornithine aminotransferase OS=Neisseria meni... [more]
ARGD_XANCP1.521e-2337.22Acetylornithine aminotransferase OS=Xanthomonas ca... [more]
ARGD_SYNY31.987e-2332.62Acetylornithine aminotransferase OS=Synechocystis ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003B05_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003B05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186543 ID=CN186543; Name=CN186543; organism=Citrus sinensis; type=EST; length=710bp
AGTATTGTTATTATGAATTCAATGGGTGCAACAAGAAGAAATTTGCATTG
CTTATTGAGCAGAGTATGCAGGAAGAGAAGTTATGGTGCTCAACCTCAAG
GAGGCACTTCTCCTTCTTCTTCTTCTTCTCAACAACTCATCAATTTGGAG
TATGAATACAGTGCCCACAATTACCACCCAGTTCCGATTGTATTCTCTCA
AGCAAAAGGGTCATCCATATGGGATCCAGAGGGCAATAAATATCTGGATT
TTCTCTCAGCTTACTCTGCAGTTAATCAGGGACATTGTCATCCAAAAATC
ATGAAAGCATTACAAGAGCAGGCAGAAAAGCTTACTCTCAGCTCTAGAGC
CTTCTATAATGATAAATTTCCAGTATTTGCAGAGCGTCTAACAAGCATGT
TTGGGTATGATATGGTACTACCTATGAACACCGGTGCCGAAGGTGTGGAG
ACAGCTCTGAAGTTGGCTAGGAAATGGGGTTACGTGAAGAAAAAATTTTC
CATAGATGAGGCTATCATTGTTTCTTGTTGTGGCTGCTTCCATGGTCGTA
CATTGGCTGCCATTTCTATGAGCTGTGACAATGAGGCCATTCGTGGTTTT
GGACCATTGTTACCTGGCCATCTTAAGGTTGATTTTGGTGATATAACTGC
TCTAGAGAAAATCTTTAAAGAAAGTGGAGATCAAATAGCTGGATTTCTTT
TTGAACCAAT
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