CN186541
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186541 vs. ExPASy Swiss-Prot
Match: RS32_XENLA (40S ribosomal protein S3-B OS=Xenopus laevis GN=rps3-B PE=2 SV=1) HSP 1 Score: 316.235 bits (809), Expect = 1.311e-85 Identity = 161/188 (85.64%), Postives = 169/188 (89.89%), Query Frame = -1 Query: 240 LAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 803 LAEDGYSGVEVRVTP +TEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQGVLGIKVKIML WDP+GK GP PLPD V+I PKDE Sbjct: 29 LAEDGYSGVEVRVTPTQTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKDE 216
BLAST of CN186541 vs. ExPASy Swiss-Prot
Match: RS3_PONAB (40S ribosomal protein S3 OS=Pongo abelii GN=RPS3 PE=2 SV=1) HSP 1 Score: 315.849 bits (808), Expect = 1.713e-85 Identity = 161/188 (85.64%), Postives = 168/188 (89.36%), Query Frame = -1 Query: 240 LAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 803 LAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FPE SVELYAE+V RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQGVLGIKVKIML WDP GK GP PLPD V+I PKDE Sbjct: 29 LAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPLPDHVSIVEPKDE 216
BLAST of CN186541 vs. ExPASy Swiss-Prot
Match: RS3_ICTPU (40S ribosomal protein S3 OS=Ictalurus punctatus GN=rps3 PE=2 SV=1) HSP 1 Score: 314.309 bits (804), Expect = 4.983e-85 Identity = 160/188 (85.11%), Postives = 168/188 (89.36%), Query Frame = -1 Query: 240 LAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE 803 LAEDGYSGVEVRVTP RTEIII ATRTQNVLGEKGRRIRELT+VVQKRF FP SVELYAEKV RGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG PVN Y+D+AVRHVLLRQGVLGIKVKIML WDP+GK GP PLPD V+I PK+E Sbjct: 29 LAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPRGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPLPDHVSIVEPKEE 216
BLAST of CN186541 vs. ExPASy Swiss-Prot
Match: RS3_MANSE (40S ribosomal protein S3 OS=Manduca sexta GN=RpS3 PE=2 SV=1) HSP 1 Score: 306.22 bits (783), Expect = 1.357e-82 Identity = 153/195 (78.46%), Postives = 167/195 (85.64%), Query Frame = -1 Query: 219 LAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPT 803 LAEDGYSGVEVRVTP R+EIII ATRTQ+VLGEKGRRIRELTSVVQKRF PE SVELYAEKV RGLCAIAQAESLRYKL+GGLAVRRACYGVLRFIMESGA+GCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQGVLGIKVKIML WD GK GP P PD + + PKDE ++PT Sbjct: 30 LAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLPWDQQGKNGPKKPQPDHILVTEPKDEPAPLEPT 224
BLAST of CN186541 vs. ExPASy Swiss-Prot
Match: RS3_DROME (40S ribosomal protein S3 OS=Drosophila melanogaster GN=RpS3 PE=1 SV=1) HSP 1 Score: 295.049 bits (754), Expect = 3.128e-79 Identity = 149/204 (73.04%), Postives = 169/204 (82.84%), Query Frame = -1 Query: 192 LAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVP 803 LAEDGYSGVEVRVTP RTEIII AT+TQ VLGEKGRRIRELT++VQKRF F +ELYAEKV RGLCAIAQAESLRYKL GGLAVRRACYGVLR+IMESGAKGCEV+VSGKLR QRAKSMKF DG M+ SG P N+Y+++A RHVLLRQGVLGIKVK+ML +DP K GP PLPD V++ PK+E+ Y P T+ ++P Sbjct: 31 LAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVLGIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKIYETP---ETEYKIP 231
BLAST of CN186541 vs. ExPASy Swiss-Prot
Match: RS3_CAEEL (40S ribosomal protein S3 OS=Caenorhabditis elegans GN=rps-3 PE=1 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 1.314e-77 Identity = 150/208 (72.12%), Postives = 169/208 (81.25%), Query Frame = -1 Query: 192 LAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDE----EEYVKPTLVATDIEVP 803 LAEDGYSGVEVR TP R E+II ATRTQNVLGE+GRRI+ELTSVVQKRF F E SVELYAEKV+NRGLCA+AQ ESLRYKL+GGLAVRRACYGVLRFIMESGA+G EVIVSGKLR QRAK+MKF DG M+ SG PVN+YI AVRHV LRQGV+GIKVKIML +DP G+ GP LPD V I P++E E + + D++VP Sbjct: 31 LAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGRRIKELTSVVQKRFGFEEGSVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESGAQGVEVIVSGKLRGQRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGIKVKIMLPYDPRGQNGPRNALPDHVQIVEPQEEVLPKEPHSQHKEEKKDVQVP 238
BLAST of CN186541 vs. ExPASy Swiss-Prot
Match: RS3_SCHPO (40S ribosomal protein S3 OS=Schizosaccharomyces pombe GN=rps3 PE=1 SV=1) HSP 1 Score: 283.878 bits (725), Expect = 7.212e-76 Identity = 146/208 (70.19%), Postives = 169/208 (81.25%), Query Frame = -1 Query: 180 LAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTLVATDIEVPIQVA 803 L+E+GYSG EVRVTP R+EIIIRAT TQ+VLGEKGRRIRELT++VQKRFKF EN+VELYAEKV NRGLCA+AQ ESLRYKLL GLAVRRA YGVLR++ME+GAKGCEV++SGKLRA RAKSMKF DG+M+ SGQP ++IDSA RHVLLRQGVLG+KVKIML P K LPD+V + PK+EE KP V I P++ A Sbjct: 31 LSEEGYSGCEVRVTPSRSEIIIRATHTQDVLGEKGRRIRELTALVQKRFKFAENTVELYAEKVQNRGLCAVAQCESLRYKLLAGLAVRRAAYGVLRYVMEAGAKGCEVVISGKLRAARAKSMKFADGFMIHSGQPAVDFIDSATRHVLLRQGVLGVKVKIML---PEPKTRQKKSLPDIVVVLDPKEEEPITKPYTV---INQPVEAA 232
BLAST of CN186541 vs. ExPASy Swiss-Prot
Match: RS3_YEAST (40S ribosomal protein S3 OS=Saccharomyces cerevisiae GN=RPS3 PE=1 SV=5) HSP 1 Score: 263.462 bits (672), Expect = 1.009e-69 Identity = 131/196 (66.84%), Postives = 163/196 (83.16%), Query Frame = -1 Query: 216 LAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKDEEEYVKPTL 803 LAE+GYSGVEVRVTP +TE+IIRATRTQ+VLGE GRRI ELT +VQKRFK+ ++ LYAE+V +RGL A+AQAES+++KLL GLA+RRA YGV+R++MESGAKGCEV+VSGKLRA RAK+MKF DG+++ SGQPVN++ID+A RHVL+RQGVLGIKVKIM DP + LPD VTI PK+EE + P++ Sbjct: 29 LAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRYVMESGAKGCEVVVSGKLRAARAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGIKVKIMR--DPAKSRTGPKALPDAVTIIEPKEEEPILAPSV 222
BLAST of CN186541 vs. ExPASy Swiss-Prot
Match: RS3_DICDI (40S ribosomal protein S3 OS=Dictyostelium discoideum GN=rps3 PE=2 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 1.046e-58 Identity = 116/182 (63.74%), Postives = 141/182 (77.47%), Query Frame = -1 Query: 258 EDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGK--QGPTTPLPDLVTI 797 ++GYSGVE++ +P TEIIIRA++TQ V+G RRI+EL S+VQKRF F E +V L+AEK+ NRGLCA+AQAESL+ KLL GL VR+ACY ++ IM GAKGCEVIVSGKLRAQRAKSMKF+DGYM+ SGQP ++ID A RHVLLRQG LG+KV IML +D K P PD+V I Sbjct: 34 DEGYSGVELKTSPGLTEIIIRASKTQAVVGPNARRIQELCSLVQKRFNFKEGTVVLFAEKILNRGLCAVAQAESLKLKLLAGLPVRKACYAIVHQIMTRGAKGCEVIVSGKLRAQRAKSMKFRDGYMIKSGQPSKDFIDFACRHVLLRQGTLGVKVAIMLPYDETRKIHGACNIPQPDVVVI 215
BLAST of CN186541 vs. ExPASy Swiss-Prot
Match: RS3_ENCCU (40S ribosomal protein S3 OS=Encephalitozoon cuniculi GN=RPS3 PE=1 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 1.285e-40 Identity = 80/187 (42.78%), Postives = 123/187 (65.78%), Query Frame = -1 Query: 243 LAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLSWDPNGKQGPTTPLPDLVTIHSPKD 803 L +G+S +E+R+ +II++ + +GEK R+R+ + +R + P+ SVE+ EKV+ +GLCA+ QA +R K+LGG+ RRA L+ + A+GC++IVSGKL+ QRAKS+KF+DG ++ SG V +YI++ V +QGV+GI+V+IML +DP G GP PLPD +TI P + Sbjct: 40 LVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKFRLRQFQHLAAQRLEVPDESVEIVVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKTARHAKAQGCQIIVSGKLKGQRAKSVKFQDGVLIHSGDAVKDYINTGYATVETKQGVIGIQVRIMLPYDPEGVLGPNYPLPDRITILEPSE 226 The following BLAST results are available for this feature:
BLAST of CN186541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186541 ID=CN186541; Name=CN186541; organism=Citrus sinensis; type=EST; length=803bpback to top |