CN186540

Overview
NameCN186540
Unique NameCN186540
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length688
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig305 contig Csv1_Contig305:17..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186540 vs. ExPASy Swiss-Prot
Match: SAP10_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 10 OS=Oryza sativa subsp. japonica GN=SAP10 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.734e-19
Identity = 51/158 (32.28%), Postives = 78/158 (49.37%), Query Frame = 3
Query:  210 GPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGSIVNETSSSNGSESVAAATVDVQASSVEPKIISVQPSCASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDK 683
            G  +C   CGFFGS AT  +CSKCYK    +Q Q +    +     ++TS    ++       D      E   +   P+  ++             +RC +C+K+VGL GF CRCG ++C +H       C FDY+ A R+AI + NP++ A K++K
Sbjct:   14 GAAMCAAGCGFFGSAATDGLCSKCYKQ---QQPQPRHLIGTAAGDSDKTSLKVVADLSTLVIKDNSGVGGEGTTVMAPPATVTKAK-----------NRCKACRKKVGLLGFPCRCGGMFCGAHA------CAFDYKAAGREAIARHNPLVVAPKINK 151          
BLAST of CN186540 vs. ExPASy Swiss-Prot
Match: SAP15_ORYSJ (Zinc finger AN1 domain-containing stress-associated protein 15 OS=Oryza sativa subsp. japonica GN=SAP15 PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 4.008e-18
Identity = 37/61 (60.66%), Postives = 49/61 (80.33%), Query Frame = 3
Query:  501 SRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDK 683
            +RC+ C+KRVGLTGF+CRCG L+C  HR+S+ H C FDY+TA R+ I +ANPVI+A K+ K
Sbjct:  113 NRCNVCRKRVGLTGFRCRCGELFCPRHRHSETHECSFDYKTAGREEIARANPVIRAAKIIK 173          
BLAST of CN186540 vs. ExPASy Swiss-Prot
Match: SAP14_ORYSJ (Zinc finger AN1 domain-containing stress-associated protein 14 OS=Oryza sativa subsp. japonica GN=SAP14 PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 1.989e-17
Identity = 37/75 (49.33%), Postives = 53/75 (70.67%), Query Frame = 3
Query:  453 ASELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKL 677
            AS  S S     +   +RC++C+++VGLTGFKCRCG  +C  HRY+D+H C FDY+++ R+ I K NPV+ A+KL
Sbjct:  159 ASYSSSSPATGEQPEANRCATCRRKVGLTGFKCRCGGTFCGGHRYADEHGCGFDYKSSGRELIAKQNPVVVADKL 233          
BLAST of CN186540 vs. ExPASy Swiss-Prot
Match: ZFAN3_RAT (AN1-type zinc finger protein 3 OS=Rattus norvegicus GN=Zfand3 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.622e-13
Identity = 55/210 (26.19%), Postives = 83/210 (39.52%), Query Frame = 3
Query:  201 PPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGS----IVNETSSSNGSESVAAATVDVQASSVEPKIISVQP----------------------SCASELSESVEAKPKEGP--------------------SRCSSCKKRVGLTGFK---CRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDK 683
            PP  P      CGF+GS  TMN+CSKC+ D   KQ       S+  S       ET+S N + SV   T+     S+  ++    P                      SC ++     EA P + P                     RC  C+ ++ L   +   CRCG ++C+ HR  ++H+C FD+    R+       ++K  KLD+
Sbjct:   15 PPRCP------CGFWGSSKTMNLCSKCFADFQKKQPDDDSTPSTSNSQSDLFSEETTSDNNNTSVTTPTLSPSQQSLPTELNVTSPSEEECGPCTDTAHVSLITPTKRSCGADSQSESEASPVKRPRLVENPERPEESGRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGRE-----EAIMKMVKLDR 213          
BLAST of CN186540 vs. ExPASy Swiss-Prot
Match: ZFAN3_MOUSE (AN1-type zinc finger protein 3 OS=Mus musculus GN=Zfand3 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.648e-13
Identity = 55/210 (26.19%), Postives = 83/210 (39.52%), Query Frame = 3
Query:  201 PPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGS----IVNETSSSNGSESVAAATVDVQASSVEPKIISVQP----------------------SCASELSESVEAKPKEGP--------------------SRCSSCKKRVGLTGFK---CRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDK 683
            PP  P      CGF+GS  TMN+CSKC+ D   KQ       S+  S       ET+S N + SV   T+     S+  ++    P                      SC ++     EA P + P                     RC  C+ ++ L   +   CRCG ++C+ HR  ++H+C FD+    R+       ++K  KLD+
Sbjct:   15 PPRCP------CGFWGSSKTMNLCSKCFADFQKKQPDDDSTPSTSNSQSDLFSEETTSDNNNTSVTTPTLSPSQQSLPTELNVTSPSTEECGPCTDTAHVSLITPTKRSCGADSQSENEASPVKRPRLVENPERPEESGRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGRE-----EAIMKMVKLDR 213          
BLAST of CN186540 vs. ExPASy Swiss-Prot
Match: ZFAN3_HUMAN (AN1-type zinc finger protein 3 OS=Homo sapiens GN=ZFAND3 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 54/210 (25.71%), Postives = 83/210 (39.52%), Query Frame = 3
Query:  201 PPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGS----IVNETSSSNGSESVAAATVDVQASSVEPKIISVQP----------------------SCASELSESVEAKPKEGP--------------------SRCSSCKKRVGLTGFK---CRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDK 683
            PP  P      CGF+GS  TMN+CSKC+ D   KQ     A S+  S       ET+S N + S+   T+      +  ++    P                      SC ++     EA P + P                     RC  C+ ++ L   +   CRCG ++C+ HR  ++H+C FD+    R+       ++K  KLD+
Sbjct:   15 PPRCP------CGFWGSSKTMNLCSKCFADFQKKQPDDDSAPSTSNSQSDLFSEETTSDNNNTSITTPTLSPSQQPLPTELNVTSPSKEECGPCTDTAHVSLITPTKRSCGTDSQSENEASPVKRPRLLENTERSEETSRSKQKSRRRCFQCQTKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGRE-----EAIMKMVKLDR 213          
BLAST of CN186540 vs. ExPASy Swiss-Prot
Match: ANUB1_HUMAN (AN1-type zinc finger and ubiquitin domain-containing protein 1 OS=Homo sapiens GN=ANUBL1 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.516e-12
Identity = 30/66 (45.45%), Postives = 45/66 (68.18%), Query Frame = 3
Query:  489 KEGPSRCSSCKKRVGL-TGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDK 683
            K+  + C  C K+ GL + ++CRCGN +C SHRY++ H C +DY++A R  + +ANPV+ A KL K
Sbjct:  661 KKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKSAGRRYLHEANPVVNAPKLPK 726          
BLAST of CN186540 vs. ExPASy Swiss-Prot
Match: ZFAN3_XENLA (AN1-type zinc finger protein 3 homolog OS=Xenopus laevis GN=zfand3 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.286e-12
Identity = 57/209 (27.27%), Postives = 85/209 (40.67%), Query Frame = 3
Query:  201 PPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQAKLAASSIGS----IVNETSSSNGSESVAAATVD-VQASSVEPKIIS--------------------VQPSCASELSESVEAKPKEGP--------------------SRCSSCKKRVGLTGFK---CRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDK 683
            PP  P      CGF+GS  TMN+CSKC+ D   KQ     A S+  S      +ET S NG+ S+   TV+  Q    E  + S                     + SC S+     +  P + P                     RC  C+ ++ L   +   CRCG ++C+ HR  ++H+C FD+    R+       ++K  KLD+
Sbjct:   15 PPRCP------CGFWGSSKTMNLCSKCFADFQKKQPDEDTAPSTSSSQSDLFPSETDSDNGNTSIPTPTVNPTQQLPTELNVDSPSKEDCGPCTDSAHVSLTTPSKRSCDSDSQSEDDTSPMKRPRLLDSGDRPDNSSRSKQKSRRRCFRCQIKLELVQQELGSCRCGYVFCMLHRLPEQHDCTFDHMGRGRE-----EAIMKMVKLDR 212          
The following BLAST results are available for this feature:
BLAST of CN186540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
SAP10_ORYSJ4.734e-1932.28Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP15_ORYSJ4.008e-1860.66Zinc finger AN1 domain-containing stress-associate... [more]
SAP14_ORYSJ1.989e-1749.33Zinc finger AN1 domain-containing stress-associate... [more]
ZFAN3_RAT6.622e-1326.19AN1-type zinc finger protein 3 OS=Rattus norvegicu... [more]
ZFAN3_MOUSE8.648e-1326.19AN1-type zinc finger protein 3 OS=Mus musculus GN=... [more]
ZFAN3_HUMAN1.475e-1225.71AN1-type zinc finger protein 3 OS=Homo sapiens GN=... [more]
ANUB1_HUMAN2.516e-1245.45AN1-type zinc finger and ubiquitin domain-containi... [more]
ZFAN3_XENLA3.286e-1227.27AN1-type zinc finger protein 3 homolog OS=Xenopus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003B03_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186540 ID=CN186540; Name=CN186540; organism=Citrus sinensis; type=EST; length=688bp
ATTGGAAAGGGAAACGAGGACGTCTCTCATCGGTTTTTGCCTGCTCTCTC
CCCGATAGGCCGATCTGGTCCATTTAATTTTAGGGGCTCATTGGATGCTG
GCTTGAGCTCGGGGATCGGCTTAAGGGATTCATTGCTGTTTCTTCTGTTG
CTCGCAGGGGTGGTGAAAACATGGACCATGATGAGACTGGATGCCAAGCT
CCTCCTGAGGGCCCTATCTTGTGCATCAACAATTGTGGTTTCTTTGGAAG
TGTGGCTACTATGAATATGTGTTCCAAATGCTACAAGGATATAATGCTGA
AACAGGATCAAGCTAAGCTTGCTGCTTCATCTATTGGAAGCATTGTGAAT
GAAACGTCAAGCAGCAATGGAAGTGAATCTGTTGCTGCTGCCACTGTTGA
TGTGCAAGCTAGTTCAGTGGAGCCAAAAATCATCTCTGTGCAGCCATCAT
GTGCTTCAGAATTGAGCGAGAGTGTGGAGGCAAAGCCGAAGGAGGGTCCC
AGCCGGTGCAGCAGTTGCAAGAAGCGTGTTGGTTTAACAGGATTCAAATG
TCGCTGTGGTAACTTATACTGTGTGTCACATCGCTATTCGGACAAACATA
ACTGCCCCTTTGACTACCGCACTGCTGCTAGGGATGCTATAATTAAAGCA
AACCCTGTGATCAAGGCTGAGAAGCTAGATAAAAATCT
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