CN186533

Overview
NameCN186533
Unique NameCN186533
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186533 vs. ExPASy Swiss-Prot
Match: Y5020_ARATH (Probable inactive receptor kinase At5g10020 OS=Arabidopsis thaliana GN=At5g10020 PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.188e-12
Identity = 63/233 (27.04%), Postives = 103/233 (44.21%), Query Frame = 2
Query:  122 LLKFKKALNNP--YVLASWN-------PKTDCCDWYCVTCDLSTNRINSLTIFAGDLPGQIP-SEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESF---------------------------GTFTGSTPDLYLSHNQLSGKI--PASLGSM-DFNTIDLSRNKL 700
            LL+F+K + +   +   SW+       P T   DW  ++CD  T  I ++ +    L G++  S +  L  L  L      S +G + P++  + +L+ L +S     GP+P  IS+L +L  L LS N   G  PS    LQ+L +L L +N++ G + E F                            + + +   L LSHN L+GK     S+GS  +   +DL  N++
Sbjct:   30 LLEFRKGIRDETSHQRISWSDTSSLTDPSTCPNDWPGISCDPETGSIIAINLDRRGLSGELKFSTLSGLTRLRNLSLSG-NSFSGRVVPSLGGISSLQHLDLSDNGFYGPIPGRISELWSLNHLNLSSNKFEGGFPSGFRNLQQLRSLDLHKNEIWGDVGEIFTELKNVEFVDLSCNRFNGGLSLPMENISSISNTLRHLNLSHNALNGKFFSEESIGSFKNLEIVDLENNQI 261          
BLAST of CN186533 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.552e-12
Identity = 52/158 (32.91%), Postives = 81/158 (51.27%), Query Frame = 2
Query:  233 INSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHL-DRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGSM-DFNTIDLSRNKL 700
            + SL + A  L G++P E+G+LP ++ ++     +  G I    AKL  L+  R+S   +SG +PDFI + T L  L +  + L G IP +++ L +L  L + D N      P+        T  L L +  L+G +P  LG +  F  +DLS NKL
Sbjct:  136 LTSLVLEANQLSGELPLELGNLPNIQQMILSS-NNFNGEIPSTFAKLTTLRDFRVSDNQLSGTIPDFIQKWTKLERLFIQASGLVGPIPIAIASLVELKDLRISDLNGPESPFPQLRNIKKMET--LILRNCNLTGDLPDYLGKITSFKFLDLSFNKL 290          

HSP 2 Score: 72.7886 bits (177), Expect = 2.027e-12
Identity = 39/115 (33.91%), Postives = 64/115 (55.65%), Query Frame = 2
Query:  230 RINSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPE 574
            ++  L I A  L G IP  +  L  L+ L    L     P  P +  +K ++TL +   N++G +PD++ ++T+  FL+LSFN LSG IP++   L+  G ++   N L GS+P+
Sbjct:  207 KLERLFIQASGLVGPIPIAIASLVELKDLRISDLNGPESPF-PQLRNIKKMETLILRNCNLTGDLPDYLGKITSFKFLDLSFNKLSGAIPNTYINLRDGGYIYFTGNMLNGSVPD 320          

HSP 3 Score: 67.3958 bits (163), Expect = 8.517e-11
Identity = 47/150 (31.33%), Postives = 73/150 (48.67%), Query Frame = 2
Query:  215 DLSTNRINSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGSM 664
            DLS N +N          G IP E G LP +   +      LTGPI      +  L +L +    +SG +P  +  L N+  + LS NN +G IPS+ +KL  L    +  N+L+G+IP+    +T     L++  + L G IP ++ S+
Sbjct:   93 DLSRNYLN----------GSIPPEWGVLPLVNIWLLGN--RLTGPIPKEFGNITTLTSLVLEANQLSGELPLELGNLPNIQQMILSSNNFNGEIPSTFAKLTTLRDFRVSDNQLSGTIPDFIQKWT-KLERLFIQASGLVGPIPIAIASL 229          
BLAST of CN186533 vs. ExPASy Swiss-Prot
Match: PII2_ARATH (Piriformospora indica-insensitive protein 2 OS=Arabidopsis thaliana GN=PII-2 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.027e-12
Identity = 47/132 (35.61%), Postives = 67/132 (50.76%), Query Frame = 2
Query:  305 LETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGSM-DFNTIDLSRNK 697
            LE+L F   P L G +   I  L  LK+L +     SG +P  I  L  L  L  + N+ +G IP+    L++L  L L RN  +G++P SFG    S   L LS+N L G +P  LG + +   +DL  N+
Sbjct:  144 LESLEFRSNPGLIGELPETIGNLTKLKSLVVLENGFSGELPASICNLKRLKRLVFAGNSFAGMIPNCFKGLKELLILDLSRNSFSGTLPTSFGDLV-SLLKLDLSNNLLEGNLPQELGFLKNLTLLDLRNNR 274          
BLAST of CN186533 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.458e-12
Identity = 51/202 (25.25%), Postives = 85/202 (42.08%), Query Frame = 2
Query:  167 SWNPKTDCCDWYCVTCDLSTNRINSLTIFAGDLPGQIPSE-VGDLPYLETL-----MFHKLPS-----------------LTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGSMDFNTIDLSRNKLE 703
            ++N     C W  + CD     +  L      L GQIP   +G L  L++L         LPS                 ++G     +     L+ L IS+ N SG +P+ +  L +L  L+L  N    +IP  L   Q L ++ L  N+L GS+P+ FG+       L L+ N++ G+          + +++S N+ +
Sbjct:   47 AYNFSAPFCSWQGLFCDSKNEHVIMLIASGMSLSGQIPDNTIGKLSKLQSLDLSNNKISALPSDFWSLNTLKNLNLSFNKISGSFSSNVGNFGQLELLDISYNNFSGAIPEAVDSLVSLRVLKLDHNGFQMSIPRGLLGCQSLVSIDLSSNQLEGSLPDGFGSAFPKLETLSLAGNKIHGRDTDFADMKSISFLNISGNQFD 248          
BLAST of CN186533 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.516e-12
Identity = 53/175 (30.29%), Postives = 81/175 (46.29%), Query Frame = 2
Query:  158 VLASWNPKT-DCCDWYCVTCDLSTNRINSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGSMDFNTI 679
            VL+ W+  + D C W  V C  S   + SL + +  L G + + +G+L +L TL+                              ++GP+P  + QL+ L  L+LS N  SG IP+SL  L  L  L L RN L+G +P      +G +  L LS N LSG  P ++ + D+  +
Sbjct:   56 VLSGWDINSVDPCTWNMVGCS-SEGFVVSLEMASKGLSGILSTSIGELTHLHTLLLQN-------------------------NQLTGPIPSELGQLSELETLDLSGNRFSGEIPASLGFLTHLNYLRLSRNLLSGQVPHLVAGLSGLS-FLDLSFNNLSGPTP-NISAKDYRIV 202          
BLAST of CN186533 vs. ExPASy Swiss-Prot
Match: SUB_ARATH (Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12
Identity = 50/147 (34.01%), Postives = 73/147 (49.66%), Query Frame = 2
Query:  215 DLSTNRINSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASL 655
            D S+N I+      G +P  +PS + +L              TG I   ++ L +L  L +    +SG +PD+  QL+ LT L+LS N L G +PSS+  L  L  L+L  NKLTG++      F     DL + +N  SG IP +L
Sbjct:   99 DFSSNHIS------GTIPQALPSSIRNLSLSSN-------RFTGNIPFTLSFLSDLSELSLGSNLLSGEIPDYFQQLSKLTKLDLSSNILEGHLPSSMGDLASLKILYLQDNKLTGTLDVIEDLF---LTDLNVENNLFSGPIPPNL 229          
BLAST of CN186533 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.898e-12
Identity = 63/212 (29.72%), Postives = 104/212 (49.06%), Query Frame = 2
Query:  101 NPNDKKVLLKFKKALNNPYVLASW-NPKTDCC--DWYCVTCDLS---TNRINSLTIFAGDLPGQIPSEVGDLPYLE--------TLMFHKLPSLT----------GPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGSM 664
            +P+D + L     +LN+P  L +W N   D C   W  +TC+ S   T  I+ L + +G L G + S++  L  L+        TL +   P+LT          G +  +I+ + +L  + +S  +++  + D  +   +L  L+LS NN SG +PSSLS +  L  L++  N+LTGSI    G        L +++N  +G IP  L S+
Sbjct:   30 DPSDVQALQVLYTSLNSPSQLTNWKNGGGDPCGESWKGITCEGSAVVTIDISDLGV-SGTL-GYLLSDLKSLRKLDVSGNSIHDTLPYQLPPNLTSLNLARNNLSGNLPYSISAMGSLSYMNVSGNSLTMSIGDIFADHKSLATLDLSHNNFSGDLPSSLSTVSTLSVLYVQNNQLTGSIDVLSGL---PLKTLNVANNHFNGSIPKELSSI 236          
BLAST of CN186533 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 70.8626 bits (172), Expect = 7.703e-12
Identity = 58/162 (35.80%), Postives = 75/162 (46.30%), Query Frame = 2
Query:  221 STNRINSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFL------------ELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGSMDF 670
            S+N +  L +    L G IPS +GD   L  L      S TG I  ++ KL++L +  IS    S   P F+ +  +   L            EL  NNLSG I      L+KL    L  N L+GSIP S    T S   L LS+N+LSG IP SL  + F
Sbjct:  437 SSNELQLLDLSWNRLTGAIPSWIGDFKALFYLDLSN-NSFTGEIPKSLTKLESLTSRNISVNEPSPDFPFFMKRNESARALQYNQIFGFPPTIELGHNNLSGPIWEEFGNLKKLHVFDLKWNALSGSIPSSLSGMT-SLEALDLSNNRLSGSIPVSLQQLSF 596          
BLAST of CN186533 vs. ExPASy Swiss-Prot
Match: Y1061_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At1g50610 OS=Arabidopsis thaliana GN=At1g50610 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11
Identity = 64/197 (32.49%), Postives = 96/197 (48.73%), Query Frame = 2
Query:  107 NDKKVLLKFKKALNNPYVLASWNPKTDCC-----DWYCVTCDLSTNRINSLTIFAGDLPGQIPSE-VGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVP-DFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLS---HNQLSGKIPASLGSMD 667
            +D   LL+FK  L N     SW+P +  C     +W+ V C   +N +  L +    L G++  + +  +  L T+ F    +  GP+ P + +  +LK+L +S    SG +P D    +  L  + L+ N   GTIPSSL+ L  L  L L+ N+  G IP SF        DL L+   +N L G IP SL +MD
Sbjct:   46 SDADCLLRFKDTLANGSEFRSWDPLSSPCQGNTANWFGVLC---SNYVWGLQLEGMGLTGKLNLDPLVPMKNLRTISFMN-NNFNGPM-PQVKRFTSLKSLYLSNNRFSGEIPADAFLGMPLLKKILLANNAFRGTIPSSLASLPMLLELRLNGNQFQGQIP-SF-----QQKDLKLASFENNDLDGPIPESLRNMD 231          
BLAST of CN186533 vs. ExPASy Swiss-Prot
Match: SRF2_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsis thaliana GN=SRF2 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 2.927e-11
Identity = 61/215 (28.37%), Postives = 99/215 (46.05%), Query Frame = 2
Query:  101 NPNDKKVLLKFKKALNNPYVLASWNPKT-DCCD--WYCVTCDLST----------------------NRINSLTIFAGDLPGQIPSEVGDLPYLETLMFHKLPSLTGPIQPAIAKLKNLKTLRISWTNISGPVPDFISQLTNLTFLELSFNNLSGTIPSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTP--DLYLSHNQLSGKIPASLGSM 664
            +P +   L    K+L NP  L  W  +  D C   W  ++C  S+                      + +  L +   +L G+IP     LP   T +     +LT  I  ++  + +L++L +S  ++SGP+ +  S L  +  ++LSFNNL+G +PSS   L  L +L+L  N+LTGS+      +    P  DL +  NQ SG IP+   S+
Sbjct:   28 DPLEVLALQDLYKSLRNPEQLRGWRLEGGDPCGEAWLGISCSGSSIVDLQLRELKLLGSLGNQLQHLHNLKILDVSFNNLEGEIPF---GLPPNATHINMAYNNLTQSIPFSLPLMTSLQSLNLSHNSLSGPLGNVFSGL-QIKEMDLSFNNLTGDLPSSFGTLMNLTSLYLQNNRLTGSV-----IYLADLPLADLNIEDNQFSGIIPSHFQSI 233          
The following BLAST results are available for this feature:
BLAST of CN186533 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 103
Match NameE-valueIdentityDescription
Y5020_ARATH1.188e-1227.04Probable inactive receptor kinase At5g10020 OS=Ara... [more]
Y1534_ARATH1.552e-1232.91Probable LRR receptor-like serine/threonine-protei... [more]
PII2_ARATH2.027e-1235.61Piriformospora indica-insensitive protein 2 OS=Ara... [more]
Y2242_ARATH3.458e-1225.25Probable LRR receptor-like serine/threonine-protei... [more]
Y5457_ARATH4.516e-1230.29Probable LRR receptor-like serine/threonine-protei... [more]
SUB_ARATH5.898e-1234.01Protein STRUBBELIG OS=Arabidopsis thaliana GN=SUB ... [more]
SRF8_ARATH5.898e-1229.72Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
PSKR1_ARATH7.703e-1235.80Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
Y1061_ARATH2.241e-1132.49Probably inactive leucine-rich repeat receptor-lik... [more]
SRF2_ARATH2.927e-1128.37Protein STRUBBELIG-RECEPTOR FAMILY 2 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003A22_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003A22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186533 ID=CN186533; Name=CN186533; organism=Citrus sinensis; type=EST; length=704bp
AGTCAGCTTCCCTACTCTTCAAAACATGAGCAACACGTCACTATTGTCTC
TGATCTTCATCTTGTCCCTTTTCATCTCCCCTTCACTCTCAGACCTCTGC
AACCCAAATGACAAAAAAGTGCTTCTCAAATTCAAAAAAGCTTTGAACAA
CCCTTACGTTCTAGCTTCTTGGAACCCAAAAACTGACTGCTGTGACTGGT
ACTGCGTCACATGCGATCTCTCCACTAACCGCATCAATTCTCTCACCATC
TTCGCCGGAGATCTCCCCGGCCAGATCCCCTCCGAAGTTGGTGATCTTCC
TTACCTCGAAACCCTAATGTTTCACAAGCTACCCAGCCTCACTGGCCCCA
TACAACCCGCCATTGCCAAGCTCAAAAACCTGAAGACGCTACGTATTAGC
TGGACAAACATTTCTGGGCCGGTTCCTGATTTTATCAGCCAACTCACCAA
CTTAACATTCTTGGAGCTTTCATTTAACAATCTTTCTGGGACGATCCCAA
GTTCACTTTCGAAGCTGCAGAAGCTTGGCGCTCTTCATTTGGACAGAAAC
AAGCTTACGGGTTCAATCCCTGAGTCTTTTGGTACATTCACCGGGAGTAC
ACCCGATCTTTACTTGTCACATAACCAGCTCTCTGGCAAAATCCCTGCCT
CTTTAGGCAGCATGGATTTTAACACCATTGACTTGTCCAGGAACAAGCTT
GAAG
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