CN186532

Overview
NameCN186532
Unique NameCN186532
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length763
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186532 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.606e-13
Identity = 57/185 (30.81%), Postives = 90/185 (48.65%), Query Frame = -3
Query:  282 PSSLSKLQKLGALHLDRNKLTGSIPESFGTFT-------------GSTP----------DLYLSHNQLSGKIPASLGSM-DFNTIDLSRNKLEGDA-SFLFGLNKTTQRIDVSRNLLEFNLSKVEFPESLTNLDLNHNKIFGSIPAQITSLENLGFLNVSYNRLCGPIPVGGKLQSFGYTEYFHN 761
            P SL  L+ + A++L  N+L+GSIP   G+               G  P          +L  SHN L+G IP++LGS+ +   + L  N   G   + LF  NK    + +  NLL  ++  V   ++L +L+L+ NK+ G +P  +  L+ L  L+VS+N L G + V   +QS  +    HN
Sbjct:  516 PPSLGNLKNVTAIYLSSNQLSGSIPPELGSLVKLEHLNLSHNILKGILPSELSNCHKLSELDASHNLLNGSIPSTLGSLTELTKLSLGENSFSGGIPTSLFQSNKLLN-LQLGGNLLAGDIPPVGALQALRSLNLSSNKLNGQLPIDLGKLKMLEELDVSHNNLSGTLRVLSTIQSLTFINISHN 699          

HSP 2 Score: 68.5514 bits (166), Expect = 4.373e-11
Identity = 55/172 (31.98%), Postives = 73/172 (42.44%), Query Frame = -3
Query:  321 PSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASL-----------------------GSMD-FNTIDLSRNKLEGDASFLFGLNKTTQRIDVSRNLLEFNLSKVEFPESLTNLDLNHNKIFGSIPAQITSLENLGFLNVSYNR-LCGPIPVGG 761
            PS LS   KL  L    N L GSIP + G+ T  T  L L  N  SG IP SL                       G++    +++LS NKL G      G  K  + +DVS N L   L  +   +SLT ++++HN   G +P  +T   N    + S N  LC   P  G
Sbjct:  564 PSELSNCHKLSELDASHNLLNGSIPSTLGSLTELTK-LSLGENSFSGGIPTSLFQSNKLLNLQLGGNLLAGDIPPVGALQALRSLNLSSNKLNGQLPIDLGKLKMLEELDVSHNNLSGTLRVLSTIQSLTFINISHNLFSGPVPPSLTKFLNSSPTSFSGNSDLCINCPADG 734          
BLAST of CN186532 vs. ExPASy Swiss-Prot
Match: IMK2_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase IMK2 OS=Arabidopsis thaliana GN=IMK2 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.097e-13
Identity = 66/215 (30.70%), Postives = 92/215 (42.79%), Query Frame = -3
Query:  267 PSSLSKLQKLGALHLDRNKLTGSIPESF--------------GTFTGSTP----------DLYLSHNQLSGKIPASLGSMD-FNTIDLSRNKLEG-------DASFLFGLNKTTQR--------IDVSRNLLEFNLSKVEF----PESLTN------LDLNHNKIFGSIPAQITSLENLGFLNVSYNRLCGPIPVGGKLQSFGYTEYFHNRCLCG 761
            P S+++   L  L L  N L+GSIP+ F                F+G+ P          ++ +SHNQLSG IP   G +    ++D S N + G       + S L  LN  +          ID   NL E NL + +     PE++ N      LDL+ N   G IP  +  L  L   NVSYN L GP+P     + F  + +  N  LCG
Sbjct:  207 PVSVARSYTLTFLDLQHNNLSGSIPDFFVNGSHPLKTLNLDHNRFSGAVPVSLCKHSLLEEVSISHNQLSGSIPRECGGLPHLQSLDFSYNSINGTIPDSFSNLSSLVSLNLESNHLKGPIPDAIDRLHNLTELNLKRNKINGPIPETIGNISGIKKLDLSENNFTGPIPLSLVHLAKLSSFNVSYNTLSGPVP-PVLSKKFNSSSFLGNIQLCG 420          

HSP 2 Score: 68.9366 bits (167), Expect = 3.349e-11
Identity = 50/147 (34.01%), Postives = 75/147 (51.02%), Query Frame = -3
Query:  330 PSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASL-GSMDFNTIDLSRNKLEGDASFLFGLNKTTQRIDVSRNLLEFNLSK--VEFPESLTNLDLNHNKIFGSIPAQITSLENLGFLNVSYNRLCGPIP 761
            P SL  L+ L  ++L  N+L+GSIP S G       +L LS NQL+G IP SL  S     ++LS N L G        + T   +D+  N L  ++    V     L  L+L+HN+  G++P  +     L  +++S+N+L G IP
Sbjct:  135 PRSLGYLKSLRGVYLFNNRLSGSIPVSLGN-CPLLQNLDLSSNQLTGAIPPSLTESTRLYRLNLSFNSLSGPLPVSVARSYTLTFLDLQHNNLSGSIPDFFVNGSHPLKTLNLDHNRFSGAVPVSLCKHSLLEEVSISHNQLSGSIP 280          
BLAST of CN186532 vs. ExPASy Swiss-Prot
Match: RPKL_ARATH (Receptor protein kinase-like protein At4g34220 OS=Arabidopsis thaliana GN=At4g34220 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.739e-13
Identity = 55/171 (32.16%), Postives = 88/171 (51.46%), Query Frame = -3
Query:  255 PSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGSM-DFNTIDLSRNKLEGDASFLFGLNKTTQRIDVSRNLLEFNLSKVEFPESLTNLDLNHNKIFGSI-PAQITSLENLGFLNVSYNRLCGPIPVGGKLQSFGYTEYFHNRCLCGAPLE 761
            P S+    +L ++ L  N L+G +P+S  + T +   L LS N  +G+IP ++  + +   + LS+N   GD    F   +  Q +D+S NLL  +L K    +SL  L+L+HNK+ G I P           +++S+N L GPIP    L +     +  N+ LCG PL+
Sbjct:  120 PDSVFNATELQSISLGSNNLSGDLPKSVNSVT-NLQLLNLSANAFTGEIPLNISLLKNLTVVSLSKNTFSGDIPSGF---EAAQILDLSSNLLNGSLPKDLGGKSLHYLNLSHNKVLGEISPNFAEKFPANATVDLSFNNLTGPIPSSLSLLNQKAESFSGNQELCGKPLK 286          
BLAST of CN186532 vs. ExPASy Swiss-Prot
Match: CLV1_ARATH (Receptor protein kinase CLAVATA1 OS=Arabidopsis thaliana GN=CLV1 PE=1 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 7.970e-13
Identity = 48/164 (29.27%), Postives = 82/164 (50.00%), Query Frame = -3
Query:  249 LGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGSMD-FNTIDLSRNKLEGDASFLFGLNKTTQRIDVSRNLLEFNLSK-VEFPESLTNLDLNHNKIFGSIPAQITSLENLGFLNVSYNRLCGPIPVGGKLQSFGYTEYFHNRCLCGAPLESC 734
            L  ++L  N  +G IP + G F  +   L+L  N+  G IP  +  +   + I+ S N + G          T   +D+SRN +   + K +   ++L  L+++ N++ GSIP  I ++ +L  L++S+N L G +P+GG+   F  T +  N  LC     SC
Sbjct:  458 LDQIYLSNNWFSGEIPPAIGNFP-NLQTLFLDRNRFRGNIPREIFELKHLSRINTSANNITGGIPDSISRCSTLISVDLSRNRINGEIPKGINNVKNLGTLNISGNQLTGSIPTGIGNMTSLTTLDLSFNDLSGRVPLGGQFLVFNETSFAGNTYLCLPHRVSC 620          
BLAST of CN186532 vs. ExPASy Swiss-Prot
Match: PSKR1_ARATH (Phytosulfokine receptor 1 OS=Arabidopsis thaliana GN=PSKR1 PE=2 SV=4)

HSP 1 Score: 73.9442 bits (180), Expect = 1.041e-12
Identity = 64/203 (31.53%), Postives = 89/203 (43.84%), Query Frame = -3
Query:  267 PSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGSMD------------------------------FN-------TIDLSRNKLEGDASFLFGLNKTTQRIDVSRNLLEFNL-SKVEFPESLTNLDLNHNKIFGSIPAQITSLENLGFLNVSYNRLCGPIPVGGKLQSFGYTEYFHNRCLCG 761
            P  LS   +L  L L  N+LTG+IP   G F      L LS+N  +G+IP SL  ++                              +N       TI+L  N L G     FG  K     D+  N L  ++ S +    SL  LDL++N++ GSIP  +  L  L   +V+YN L G IP GG+ Q+F  + +  N  LCG
Sbjct:  432 PRWLSSSNELQLLDLSWNRLTGAIPSWIGDFKALFY-LDLSNNSFTGEIPKSLTKLESLTSRNISVNEPSPDFPFFMKRNESARALQYNQIFGFPPTIELGHNNLSGPIWEEFGNLKKLHVFDLKWNALSGSIPSSLSGMTSLEALDLSNNRLSGSIPVSLQQLSFLSKFSVAYNNLSGVIPSGGQFQTFPNSSFESNH-LCG 632          
BLAST of CN186532 vs. ExPASy Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.041e-12
Identity = 55/147 (37.41%), Postives = 72/147 (48.98%), Query Frame = -3
Query:  324 PSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGSM-DFNTIDLSRNKLEGDASFLFGLNKTTQRIDVSRNLLEFNLSKVEFPESLTNLDLNHNKIFGSIPAQITSLENLGFLNVSYNRLCGPIPVG 761
            PS+L     L  L L  N  +G +P+ FG+    T  LYL  N LSG IPAS+G + +   + +S N L G    L G                 N SK+E+      L LN+NK+ GS+PA +  LENLG L VS N L G +  G
Sbjct:  117 PSTLGNCTSLEYLDLSNNDFSGEVPDIFGSLQNLT-FLYLDRNNLSGLIPASVGGLIELVDLRMSYNNLSGTIPELLG-----------------NCSKLEY------LALNNNKLNGSLPASLYLLENLGELFVSNNSLGGRLHFG 239          
BLAST of CN186532 vs. ExPASy Swiss-Prot
Match: BRL1_ARATH (Serine/threonine-protein kinase BRI1-like 1 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.041e-12
Identity = 48/145 (33.10%), Postives = 71/145 (48.97%), Query Frame = -3
Query:  249 TFTGSTPDLY--LSHNQLSGKIPASLGSMDF-NTIDLSRNKLEGDASFLFGLNKTTQRIDVSRNLLEFNLSKVEFPESLTNLDLNHNKIFGSIPAQITSLENLGFLNVSYNRLCGPIPVGGKLQSFGYTEYFHNRCLCGAPLESC 674
            TF+ +   +Y  +S+N +SG IP   G+M +   ++L  N++ G     FG  K                       ++  LDL+HN + G +P  + SL  L  L+VS N L GPIP GG+L +F  + Y +N  LCG PL  C
Sbjct:  634 TFSANGSMIYFDISYNAVSGFIPPGYGNMGYLQVLNLGHNRITGTIPDSFGGLK-----------------------AIGVLDLSHNNLQGYLPGSLGSLSFLSDLDVSNNNLTGPIPFGGQLTTFPVSRYANNSGLCGVPLRPC 755          
BLAST of CN186532 vs. ExPASy Swiss-Prot
Match: Y5148_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g61480 OS=Arabidopsis thaliana GN=At5g61480 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.319e-12
Identity = 54/164 (32.93%), Postives = 76/164 (46.34%), Query Frame = -3
Query:  279 PSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGSM-DFNTIDLSRNKLEGDASFLFGLNKTTQRIDVSRNLLEFNL-SKVEFPESLTNLDLNHNKIFGSIPAQITSLENLGFLNVSYNRLCGPIPVG-GKLQSFGYTEYFHNR 761
            P S S L+ L  L    N+L+GSIP  F T    T  L L  N LSG++P  +G + +  T+ L  N   G      G N   + +DVS N     + S +     L  L L  N   G +P  +T  E+L       NRL G IP+G G L++  + +  +NR
Sbjct:  290 PESYSNLKSLKLLDFSSNQLSGSIPSGFSTLKNLTW-LSLISNNLSGEVPEGIGELPELTTLFLWNNNFTGVLPHKLGSNGKLETMDVSNNSFTGTIPSSLCHGNKLYKLILFSNMFEGELPKSLTRCESLWRFRSQNNRLNGTIPIGFGSLRNLTFVDLSNNR 452          
BLAST of CN186532 vs. ExPASy Swiss-Prot
Match: Y3475_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At3g47570 OS=Arabidopsis thaliana GN=At3g47570 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.319e-12
Identity = 50/166 (30.12%), Postives = 78/166 (46.99%), Query Frame = -3
Query:  267 PSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGSM-DFNTIDLSRNKLEGDASFLFGLNKTTQRIDVSRNLLEFNLSKVEFPESLTNLDLNHNKIFGSIPAQITSLENLGFLNVSYNRLCGPIPVGGKLQSFGYTEYFHNRCLCG 761
            P+SL     L  L +  NKL G+IP            L +S N L G +P  +G++ +  T+ L  NKL G      G   T + + +  NL   ++  ++    +  +DL++N + GSIP    S   L +LN+S+N L G +PV G  ++        N  LCG
Sbjct:  450 PTSLGNCSHLLELWIGDNKLNGTIPLEIMKIQ-QLLRLDMSGNSLIGSLPQDIGALQNLGTLSLGDNKLSGKLPQTLGNCLTMESLFLEGNLFYGDIPDLKGLVGVKEVDLSNNDLSGSIPEYFASFSKLEYLNLSFNNLEGKVPVKGIFENATTVSIVGNNDLCG 614          
BLAST of CN186532 vs. ExPASy Swiss-Prot
Match: RLK5_ARATH (Receptor-like protein kinase 5 OS=Arabidopsis thaliana GN=RLK5 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.319e-12
Identity = 54/156 (34.62%), Postives = 86/156 (55.13%), Query Frame = -3
Query:  312 PSSLSKLQKLGALHLDRNKLTGSIPESFGTFTGSTPDLYLSHNQLSGKIPASLGSMD-FNTIDLSRNKLEGDASFLFGLNKTTQRIDVSRNLLEFNLSK-VEFPESLTNLDLNHNKIFGSIPAQITSLENLGFLNVSYNRLCGPIPVG----GKLQ 761
            P SLS+L  L  L L  N+LTGSIP S+ T   +   + L +N  SG++P S+G+M      D S NKL G       L    + +++  N+LE  L + +   ++L+ L L +N++ G +P+Q+ +   L ++++SYNR  G IP      GKL+
Sbjct:  229 PPSLSRLTSLVNLDLTFNQLTGSIP-SWITQLKTVEQIELFNNSFSGELPESMGNMTTLKRFDASMNKLTGKIPDNLNL-LNLESLNLFENMLEGPLPESITRSKTLSELKLFNNRLTGVLPSQLGANSPLQYVDLSYNRFSGEIPANVCGEGKLE 382          
The following BLAST results are available for this feature:
BLAST of CN186532 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
RPK1_IPONI1.606e-1330.81Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]
IMK2_ARATH2.097e-1330.70Probably inactive leucine-rich repeat receptor-lik... [more]
RPKL_ARATH2.739e-1332.16Receptor protein kinase-like protein At4g34220 OS=... [more]
CLV1_ARATH7.970e-1329.27Receptor protein kinase CLAVATA1 OS=Arabidopsis th... [more]
PSKR1_ARATH1.041e-1231.53Phytosulfokine receptor 1 OS=Arabidopsis thaliana ... [more]
PEPR2_ARATH1.041e-1237.41Leucine-rich repeat receptor-like protein kinase P... [more]
BRL1_ARATH1.041e-1233.10Serine/threonine-protein kinase BRI1-like 1 OS=Ara... [more]
Y5148_ARATH2.319e-1232.93Probable leucine-rich repeat receptor-like protein... [more]
Y3475_ARATH2.319e-1230.12Probable LRR receptor-like serine/threonine-protei... [more]
RLK5_ARATH2.319e-1234.62Receptor-like protein kinase 5 OS=Arabidopsis thal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003A22_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003A22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186532 ID=CN186532; Name=CN186532; organism=Citrus sinensis; type=EST; length=763bp
TTTTTTTTTTTTTTTTTAATTCTCGATGTGCCAGCTTCTTACCATTATGT
TTTTATTATTCGAATCATACATAGACTTCTTGTTACATTTAATAATGAAC
AATCAATAAAAGCTTCTTACCCAACCCCATGAAGCATCATCTTTGTGATA
CTTTTAAACACAGTATGCTGCTGATATTCAATTTATATATAAGCCTACAA
TACAAATACAATACACTGAAAGTGCAATTCCAGTCACTGCATTCACTTGC
AGCTTTCGAGGGGCGCGCCACACAAGCACCTATTATGAAAATACTCCGTG
TATCCAAAGCTCTGCAACTTTCCTCCCACGGGAATCGGCCCACACAACCT
GTTGTAACTGACATTCAAGAATCCTAGATTCTCTAGCGAAGTAATTTGAG
CAGGAATGCTTCCGAATATCTTGTTGTGATTCAAATCCAAATTTGTCAAG
CTCTCTGGAAACTCAACCTTGGACAGATTAAATTCTAACAAGTTTCTTGA
AACATCAATTCTCTGCGTCGTCTTGTTCAACCCGAACAAAAACGAAGCAT
CGCCTTCAAGCTTGTTCCTGGACAAGTCAATGGTGTTAAAATCCATGCTG
CCTAAAGAGGCAGGGATTTTGCCAGAGAGCTGGTTATGTGACAAGTAAAG
ATCGGGTGTACTCCCGGTGAATGTACCAAAAGACTCAGGGATTGAACCCG
TAAGCTTGTTTCTGTCCAAATGAAGAGCGCCAAGCTTCTGCAGCTTCGAA
AGTGAACTTGGGA
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