CN186513

Overview
NameCN186513
Unique NameCN186513
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length642
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6963 contig Csv1_Contig6963:288..929. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186513 vs. ExPASy Swiss-Prot
Match: ILL4_ORYSJ (IAA-amino acid hydrolase ILR1-like 4 OS=Oryza sativa subsp. japonica GN=ILL4 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.134e-24
Identity = 61/126 (48.41%), Postives = 77/126 (61.11%), Query Frame = -3
Query:  272 QARVFRCSATVDFFDKGNSVYPPPVNDEDMYEHVKKVAIDLLGLTNYRVVPPMMGAEDFSFYSEVVPAAFYYIGI---KNETLGSIHTG----HSPYFMIDEDVLPVGAAVHATIAERFLNEYGQG 628
            QA V RC+A VDF +     YP  VNDE MY H K VA  +LG  N  V P  MGAEDF FY++ +PAAF+ IG+    N+  G   T     HSP+F++DE+ LPVGAA HA +A  +LN+   G
Sbjct:  286 QAAVNRCTAAVDFMEDKLRPYPATVNDEGMYAHAKAVAESMLGEANVTVSPMCMGAEDFGFYAQRIPAAFFGIGVGSNGNDGGGMAETTKNQLHSPHFVVDEEALPVGAAFHAAVAIEYLNKNASG 411          
BLAST of CN186513 vs. ExPASy Swiss-Prot
Match: ILL2_ORYSJ (IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sativa subsp. japonica GN=ILL2 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.482e-24
Identity = 53/122 (43.44%), Postives = 81/122 (66.39%), Query Frame = -3
Query:  284 VFVEQARVFRCSATVDFFDKGNSVYPPPVNDEDMYEHVKKVAIDLLGLTN--YRVVPPMMGAEDFSFYSEVVPAA-FYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 640
            V V Q+ V+RC+A VDF   G  + PP +N   ++ H + VA + LG +      + P MG+EDF+ +SE VPA+ FY++G++NE  G +H  HSP+F +D+  LP GAA+HA++A R+L+E
Sbjct:  322 VIVAQSAVYRCAAAVDFHAGGRPLLPPTINSAALHAHFQAVAAETLGASAAVLGAMEPCMGSEDFAVFSEAVPASHFYFVGVRNEAEGLVHLAHSPHFRVDDAALPYGAALHASLAMRYLDE 443          
BLAST of CN186513 vs. ExPASy Swiss-Prot
Match: ILL1_ARATH (IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsis thaliana GN=ILL1 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 5.630e-24
Identity = 53/119 (44.54%), Postives = 80/119 (67.23%), Query Frame = -3
Query:  284 VFVEQARVFRCSATVDFFDKGNSVYPPPVNDEDMYEHVKKVAIDLLGLTNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 640
            +  +QA V RC+A+V+    GN   PP VN+ D+Y+  KKV  DLLG   +    P MG+EDFS+++E +P  F  +G+++ET G   + HSP++ I+EDVLP GAA+HAT+A ++L +
Sbjct:  307 IITKQAAVHRCNASVNLAPNGNQPMPPTVNNMDLYKKFKKVVRDLLGQEAFVEAVPEMGSEDFSYFAETIPGHFSLLGMQDETQG-YASSHSPHYRINEDVLPYGAAIHATMAVQYLKD 424          
BLAST of CN186513 vs. ExPASy Swiss-Prot
Match: ILL2_ARATH (IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsis thaliana GN=ILL2 PE=1 SV=2)

HSP 1 Score: 110.153 bits (274), Expect = 9.604e-24
Identity = 53/119 (44.54%), Postives = 80/119 (67.23%), Query Frame = -3
Query:  284 VFVEQARVFRCSATVDFFDKGNSVYPPPVNDEDMYEHVKKVAIDLLGLTNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 640
            V  +QA V RC+A+V+    G    PP VN++D+Y+  KKV  DLLG   +    P+MG+EDFS+++E +P  F  +G+++ET G   + HSP + I+EDVLP GAA+HA++A ++L E
Sbjct:  308 VITKQAAVHRCNASVNLTPNGREPMPPTVNNKDLYKQFKKVVRDLLGQEAFVEAAPVMGSEDFSYFAETIPGHFSLLGMQDETNG-YASSHSPLYRINEDVLPYGAAIHASMAVQYLKE 425          
BLAST of CN186513 vs. ExPASy Swiss-Prot
Match: ILL3_ARATH (IAA-amino acid hydrolase ILR1-like 3 OS=Arabidopsis thaliana GN=ILL3 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.387e-22
Identity = 49/116 (42.24%), Postives = 73/116 (62.93%), Query Frame = -3
Query:  281 QARVFRCSATVDFFDKGNSVYPPPVNDEDMYEHVKKVAIDLLGLTNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNEY 628
            QA V RC A +D  +  + +YP  VND  ++E  +KV   LLG    +    +M  EDF+FY + +P  +  IGI+NE +GS+ + HSPYF +DE+VLP+G+A  A +AE +L E+
Sbjct:  305 QAEVQRCKADIDMHEDDHPMYPATVNDHKLHEFTEKVLKLLLGPEKVKPANKVMAGEDFAFYQQKIPGYYIGIGIRNEEIGSVRSVHSPYFFLDENVLPIGSATFAALAEMYLQEH 420          
BLAST of CN186513 vs. ExPASy Swiss-Prot
Match: ILL5_ORYSJ (IAA-amino acid hydrolase ILR1-like 5 OS=Oryza sativa subsp. japonica GN=ILL5 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.035e-22
Identity = 49/115 (42.61%), Postives = 69/115 (60.00%), Query Frame = -3
Query:  284 QARVFRCSATVDFFDKGNSVYPPPVNDEDMYEHVKKVAIDLLGLTNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 628
            QA V RC   V        +YP   NDE ++ HV+ V   LLG    +    +M  EDF+FY ++VP   + IGI+N  +GS+HT H+P F +DEDV+P+GAA+H  +AE +L E
Sbjct:  299 QAAVHRCKGVVQIKRDDYPMYPAVFNDEKLHHHVETVGRRLLGPDKVKPGEKIMAGEDFAFYQQLVPGVMFGIGIRNGEVGSVHTVHNPKFFVDEDVIPIGAALHTALAEMYLTE 413          
BLAST of CN186513 vs. ExPASy Swiss-Prot
Match: ILL5_ARATH (IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsis thaliana GN=ILL5 PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.533e-21
Identity = 45/117 (38.46%), Postives = 78/117 (66.67%), Query Frame = -3
Query:  290 VFVEQARVFRCSATVDFFDKGNSVYPPPVNDEDMYEHVKKVAIDLLGLTNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFL 640
            V   QA V  C+ATVDF +     +PP VN++ ++   K V++D+LG+ NY    P+M +EDF+FY + +P  F ++G++N++   +   HSP+F ++E++LP GA++ A++A R+L
Sbjct:  307 VITTQASVNMCNATVDFLEDETPPFPPTVNNKTLHLFYKNVSVDMLGIENYVETLPVMVSEDFAFYQQAIPGHFSFVGMQNKSHSPMANPHSPFFEVNEELLPYGASLLASLATRYL 423          
BLAST of CN186513 vs. ExPASy Swiss-Prot
Match: CBPX1_SULSO (Thermostable carboxypeptidase 1 OS=Sulfolobus solfataricus GN=cpsA1 PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.537e-13
Identity = 38/112 (33.93%), Postives = 64/112 (57.14%), Query Frame = -3
Query:  284 VFRCSATVDFFDKGNSVYPPPVNDEDMYEHVKKVAIDLLGLTNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 619
            ++  +  V F +    VYP  VN+ ++ + V K+   L  ++      P++GAEDFS + +  P  ++++G +NE  G I+  HS  F +DEDVL +GA  HA +A +F N+
Sbjct:  288 IYGATCEVKFME---DVYPTTVNNPEVTDEVMKI---LSSISTVVETEPVLGAEDFSRFLQKAPGTYFFLGTRNEKKGCIYPNHSSKFCVDEDVLKLGALAHALLAVKFSNK 393          
BLAST of CN186513 vs. ExPASy Swiss-Prot
Match: CBPX2_SULSO (Thermostable carboxypeptidase 2 OS=Sulfolobus solfataricus GN=cpsA2 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.471e-13
Identity = 38/112 (33.93%), Postives = 64/112 (57.14%), Query Frame = -3
Query:  284 VFRCSATVDFFDKGNSVYPPPVNDEDMYEHVKKVAIDLLGLTNYRVVPPMMGAEDFSFYSEVVPAAFYYIGIKNETLGSIHTGHSPYFMIDEDVLPVGAAVHATIAERFLNE 619
            ++  +  V F +    VYP  VN+ ++ + V K+   L  ++      P++GAEDFS + +  P  ++++G +NE  G I+  HS  F +DEDVL +GA  HA +A +F N+
Sbjct:  288 IYGATCEVKFME---DVYPITVNNPEVTDEVMKI---LSSISTVVETEPVLGAEDFSRFLQKAPGMYFFLGTRNEKKGCIYPNHSSKFCVDEDVLKLGALAHALLAIKFSNK 393          
The following BLAST results are available for this feature:
BLAST of CN186513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
ILL4_ORYSJ1.134e-2448.41IAA-amino acid hydrolase ILR1-like 4 OS=Oryza sati... [more]
ILL2_ORYSJ1.482e-2443.44IAA-amino acid hydrolase ILR1-like 2 OS=Oryza sati... [more]
ILL1_ARATH5.630e-2444.54IAA-amino acid hydrolase ILR1-like 1 OS=Arabidopsi... [more]
ILL2_ARATH9.604e-2444.54IAA-amino acid hydrolase ILR1-like 2 OS=Arabidopsi... [more]
ILL3_ARATH1.387e-2242.24IAA-amino acid hydrolase ILR1-like 3 OS=Arabidopsi... [more]
ILL5_ORYSJ4.035e-2242.61IAA-amino acid hydrolase ILR1-like 5 OS=Oryza sati... [more]
ILL5_ARATH1.533e-2138.46IAA-amino acid hydrolase ILR1-like 5 OS=Arabidopsi... [more]
CBPX1_SULSO1.537e-1333.93Thermostable carboxypeptidase 1 OS=Sulfolobus solf... [more]
CBPX2_SULSO4.471e-1333.93Thermostable carboxypeptidase 2 OS=Sulfolobus solf... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003A09_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003A09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186513 ID=CN186513; Name=CN186513; organism=Citrus sinensis; type=EST; length=642bp
AAATATGTAGAACATTTGGGAGCGTTTACAACTTAAAACTAATGGTACCA
GTAGAGGATCCTCTACTTCTTCATTTACACTCTTGCCCCTTGGATGTCCT
CCCCTAAACCCCGAGTACACCAAAAAACTAGGGGCTTTAACCTATCTGCG
GGATATTATGCCCTTTAACTGCCAAGTGCACCAAAAATAAGGGAGCACAA
GTTAGTATAAGTCTTGCTCTTTGATTAAATACTTCCTGCTCTATTGGCTT
AAGCTACAGCCAATTTTTCCAGCCTTGTCCATACTCATTTAAAAATCTTT
CTGCAATAGTTGCATGAACTGCAGCACCTACAGGTAGAACATCTTCATCT
ATCATAAAATAGGGTGAATGTCCCGTATGTATTGAACCCAAGGTCTCGTT
TTTTATTCCAATGTAGTAAAAGGCTGCAGGAACCACCTCTGAATAAAAAG
AGAAGTCCTCTGCCCCCATCATTGGGGGAACCACCCTATAATTCGTAAGA
CCTAACAAATCAATGGCCACTTTCTTCACATGCTCATACATGTCTTCATC
ATTCACGGGGGGGGGATAGACTGAATTACCCTTGTCGAAAAAATCCACTG
TTGCCGAGCACCTAAAAACCCTAGCCTGCTCAACAAAAACCT
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