CN186510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186510 vs. ExPASy Swiss-Prot
Match: ERF1_LOXST (Eukaryotic peptide chain release factor subunit 1 OS=Loxodes striatus GN=eRF1 PE=2 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 6.484e-59 Identity = 105/181 (58.01%), Postives = 141/181 (77.90%), Query Frame = 1 Query: 166 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGK-EKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAE 705 +GNGTS+ISLI+PP++Q+S + + L D G A NIKS+ +++V AI S +Q+L + ++PPNGL+LY G + +D K EK++ EP R IN + +LC+N F+T+ L ++L+ DKFGFI+MDGNG+LFGTL GN RE+LHKF VDLPKKHGRGGQSALRFARLR+EKRHNY++K AE Sbjct: 25 KGNGTSLISLIIPPKEQISLINQKLTDAHGRAQNIKSKAVQKAVQDAIISTKQKLSVIKQIPPNGLILYCGKFIGEDEKTEKQILEVLEPLRAINTTFFLCENTFYTQPLRDMLQEQDKFGFIIMDGNGSLFGTLQGNAREILHKFDVDLPKKHGRGGQSALRFARLRLEKRHNYMKKVAE 205
BLAST of CN186510 vs. ExPASy Swiss-Prot
Match: RF1_THEVO (Peptide chain release factor subunit 1 OS=Thermoplasma volcanium GN=prf1 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.100e-33 Identity = 75/179 (41.90%), Postives = 102/179 (56.98%), Query Frame = 1 Query: 169 GNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAE 705 G GT +ISL +PP Q+S V L DE+ T+SNIKS+ R++VL AI S RLK Y PPNGLV + G I T + + T EP PI +Y CD++FHTE L +L+ + +G IV+D G L+G EV+ +P KH +GGQS+ RF RL + + +K E Sbjct: 27 GRGTELISLYIPPEKQISDVVAYLRDEYSTSSNIKSKSTRKNVLAAIESIMSRLKYYRFPPPNGLVFFVGHIATRGDQTEMYTKIIEPPEPITTFMYKCDSEFHTEMLKAMLDEKEIYGLIVIDRKEATVGFLNGTRIEVVENVQSQVPSKHHQGGQSSRRFERLIEIAANEFFKKVGE 205
BLAST of CN186510 vs. ExPASy Swiss-Prot
Match: RF1_THEAC (Peptide chain release factor subunit 1 OS=Thermoplasma acidophilum GN=prf1 PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.033e-32 Identity = 74/179 (41.34%), Postives = 100/179 (55.87%), Query Frame = 1 Query: 169 GNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAE 705 G GT +ISL +PP Q+S V L DE+ T+SNIKS+ R++VL AI S RLK Y PPNG V + G I T + + T EP PI +Y CD++FH E L +LE + +G IV+D G L+G EV+ +P KH +GGQS+ RF RL + + +K E Sbjct: 27 GRGTELISLYIPPDKQISDVVAYLRDEYSTSSNIKSKSTRKNVLAAIESIMARLKYYKTPPPNGFVFFEGHIATRGDQTEMYTKIIEPPEPITTFMYKCDSEFHLEMLKTMLEEKEIYGLIVIDRKEATVGFLNGTRIEVVDNVQSQVPSKHHQGGQSSRRFERLIEIAANEFFKKVGE 205
BLAST of CN186510 vs. ExPASy Swiss-Prot
Match: RF1_PYRAB (Peptide chain release factor subunit 1 OS=Pyrococcus abyssi GN=prf1 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.174e-32 Identity = 71/180 (39.44%), Postives = 103/180 (57.22%), Query Frame = 1 Query: 166 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAE 705 RG GT +ISL +P +S+V + L +E+ TA NIKS+ R++VLGA+ A Q LKLY + P NGL L+ G + +G P P+N LY CD F TE L E+L D +G I ++ N G L G EVL + + ++P K GGQSA R+ R+R ++ H ++++ E Sbjct: 25 RGRGTELISLYIPAGYDLSKVMQQLREEYSTAQNIKSKTTRKNVLGALERAMQHLKLYKQTPENGLALFVGNVSEMEGNTDIRLWAIVPPEPLNVRLYRCDQTFVTEPLEEMLRVKDAYGLITVEKNEATIGLLRGKRIEVLDELTSNVPGKTRAGGQSARRYERIREQETHEFMKRIGE 204
BLAST of CN186510 vs. ExPASy Swiss-Prot
Match: RF1_METKA (Peptide chain release factor subunit 1 OS=Methanopyrus kandleri GN=prf1 PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 8.825e-32 Identity = 73/180 (40.56%), Postives = 103/180 (57.22%), Query Frame = 1 Query: 166 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAE 705 RG GT +I++ +PP +++S V + +E+ ASNIKS+ R++V AI QRLK+ + P NGLV+ GT V D KEK V EP P++ +Y CD+KF+ E L E LE D +G +VMD G + G E + + + D+P KH GGQS RF RL H + +K E Sbjct: 23 RGQGTELITIYIPPENRLSDVIAQMREEYSQASNIKSKRTRKNVQSAIEVVMQRLKMVGETPENGLVVLVGT-VQDGTKEKMVAELIEPPEPVDRFIYRCDSKFYLEPLKEYLEEKDVYGILVMDRREATIGLVKGKRIEPVKRLTSDVPGKHKAGGQSQRRFDRLIEHAAHEFYQKVGE 201
BLAST of CN186510 vs. ExPASy Swiss-Prot
Match: RF1_THEON (Peptide chain release factor subunit 1 OS=Thermococcus onnurineus (strain NA1) GN=prf1 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.153e-31 Identity = 69/180 (38.33%), Postives = 102/180 (56.67%), Query Frame = 1 Query: 166 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAE 705 RG T ++SL +P +++V + L +E+GTA NIKS+ R++VLGA+ A Q LKLY K P NGL L+ G + +G P P+ LY CD F TE L E+L D +G I ++ N G L G EV+ + ++P K GGQSA R+ R+R ++ H ++++ AE Sbjct: 22 RGRATELVSLYIPAGYDINKVMQQLREEYGTAQNIKSKSTRKNVLGALERAMQHLKLYRKTPENGLALFVGNVSEQEGVSDIKLWAIVPPEPLKVRLYRCDQTFVTEPLEEMLRVKDAYGLITVEKNEATIGLLRGKRIEVIDDLTSNVPGKTRAGGQSARRYERIREQETHEFMKRIAE 201
BLAST of CN186510 vs. ExPASy Swiss-Prot
Match: RF1_PYRKO (Peptide chain release factor subunit 1 OS=Pyrococcus kodakaraensis GN=prf1 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.153e-31 Identity = 68/180 (37.78%), Postives = 103/180 (57.22%), Query Frame = 1 Query: 166 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAE 705 RG T ++SL +P +++V + L +E+GTA NIKS+ R++VLGA+ A Q LKLY + P NGL L+ G + +G P P+N LY CD F TE L E+L D +G I ++ N G L G EV+ + + ++P K GGQSA R+ R+R ++ H ++++ E Sbjct: 22 RGRATELVSLYIPAGYDINKVMQQLREEYGTAQNIKSKSTRKNVLGALERAMQHLKLYKQTPENGLALFVGNVSEQEGVSDIKLWAIVPPEPLNVRLYRCDQTFVTEPLEEMLRVKDAYGLITVEKNEATIGLLRGKRIEVIDELTSNVPGKTRAGGQSARRYERIREQETHEFMKRIGE 201
BLAST of CN186510 vs. ExPASy Swiss-Prot
Match: RF1_PYRHO (Peptide chain release factor subunit 1 OS=Pyrococcus horikoshii GN=prf1 PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.505e-31 Identity = 70/180 (38.89%), Postives = 103/180 (57.22%), Query Frame = 1 Query: 166 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAE 705 RG GT +ISL +P +S+V + L +E+ TA NIKS+ R++VLGA+ A Q LKLY + P NGL L+ G + +G P P+N LY CD F TE L E+L D +G I ++ N G L G E+L + + ++P K GGQSA R+ R+R ++ H ++++ E Sbjct: 25 RGRGTELISLYIPAGYDLSKVMQQLREEYSTAQNIKSKTTRKNVLGALERAMQHLKLYKQTPENGLALFVGNVSEIEGNTDIRLWAIIPPEPLNVRLYRCDQTFVTEPLEEMLRVKDAYGLITVEKNEATIGLLRGKRIELLDELTSNVPGKTRAGGQSARRYERIREQETHEFMKRIGE 204
BLAST of CN186510 vs. ExPASy Swiss-Prot
Match: RF1_THESM (Peptide chain release factor subunit 1 OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=prf1 PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.353e-31 Identity = 67/180 (37.22%), Postives = 101/180 (56.11%), Query Frame = 1 Query: 166 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAE 705 RG T ++SL +P +++V + L +E+GTA NIKS+ R++VLGA+ A Q LKLY + P GL L+ G + +G P P+N LY CD F TE L E+L D +G I ++ N G L G EV+ + ++P K GGQSA R+ R+R ++ H ++++ E Sbjct: 22 RGRATELVSLYIPADYDLNKVMQQLREEYGTAQNIKSKTTRKNVLGALERAMQHLKLYRQTPETGLALFVGNVSEQEGVSDIRVFAIVPPEPLNVRLYRCDQTFVTEPLEEMLRVKDAYGLITVEKNEATIGILRGKKIEVIEDLTSNVPGKTRAGGQSARRYERIREQEAHEFMKRIGE 201
BLAST of CN186510 vs. ExPASy Swiss-Prot
Match: RF1_PYRFU (Peptide chain release factor subunit 1 OS=Pyrococcus furiosus GN=prf1 PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.353e-31 Identity = 70/180 (38.89%), Postives = 103/180 (57.22%), Query Frame = 1 Query: 166 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAE 705 RG GT +ISL +P +S+V + L +E+ TA NIKS+ R++VLGA+ A Q LKLY + P NGL L+ G + +G P P+N LY CD F TE L E+L + +G I ++ N G L G EVL + + ++P K GGQSA R+ R+R ++ H ++++ E Sbjct: 25 RGRGTELISLYIPAGYDLSKVMQQLREEYSTAQNIKSKTTRKNVLGALERAMQHLKLYKQTPENGLALFVGNVSEMEGVTDIRLWAIIPPEPLNVRLYRCDQTFVTEPLEEMLRVKEAYGLITVEKNEATIGILRGKRIEVLDELTSNVPGKTRAGGQSARRYERIREQETHEFMKRIGE 204 The following BLAST results are available for this feature:
BLAST of CN186510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186510 ID=CN186510; Name=CN186510; organism=Citrus sinensis; type=EST; length=707bpback to top |