CN186510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186510 vs. ExPASy Swiss-Prot
Match: RF1_PICTO (Peptide chain release factor subunit 1 OS=Picrophilus torridus GN=prf1 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.260e-30 Identity = 72/179 (40.22%), Postives = 99/179 (55.31%), Query Frame = 1 Query: 169 GNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAE 705 G GT +ISL +PP Q+S V + L +E+ T+SNIKS+ R++VL AI S RLK Y + P GLV + G I T + + T EP PI +Y CD+ FH E L L+ D +G IV+D G L G EV+ +P KH +GGQS+ RF RL +++ +K E Sbjct: 23 GRGTELISLYIPPDKQISDVVQYLREEYSTSSNIKSKSTRKNVLAAIESIMSRLKYYKQPPETGLVFFVGHIATRGDQTEMYTKIIEPPEPIQTFMYKCDSNFHLEQLESQLKEKDIYGLIVIDRKEATVGFLKGTRIEVVDYEQSLVPSKHHQGGQSSRRFERLIEIAANDFFKKIGE 201
BLAST of CN186510 vs. ExPASy Swiss-Prot
Match: RF1_ARCFU (Peptide chain release factor subunit 1 OS=Archaeoglobus fulgidus GN=prf1 PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 2.403e-29 Identity = 71/180 (39.44%), Postives = 102/180 (56.67%), Query Frame = 1 Query: 166 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAE 705 +G GT +I+L +PP ++ V+ L E ASNIKS+ R +VL I + RLK + K P NG+V+ +G +V +GKEK +T EP P+ Y CD+KF+ + L E+L +G IV+D G L G EVL + +P KH +GGQS++RF RLR H + +K E Sbjct: 20 KGRGTELITLYIPPDKNIADVSNQLRSELSQASNIKSKQTRTNVLAGIEAILNRLKHFRKPPENGMVIISG-VVNINGKEKHITEIIEPPEPVPLYKYHCDSKFYLDPLKEMLTEKKLYGLIVLDRREATVGLLKGKRIEVLDWDTSMVPGKHRQGGQSSVRFERLREIAIHEFYKKVGE 198
BLAST of CN186510 vs. ExPASy Swiss-Prot
Match: RF1_METTH (Peptide chain release factor subunit 1 OS=Methanobacterium thermoautotrophicum GN=prf1 PE=3 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 1.558e-28 Identity = 67/181 (37.02%), Postives = 101/181 (55.80%), Query Frame = 1 Query: 166 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDD-GKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAE 705 RG GT ++S+ +PP Q+S V K + +E ++NIKS+ +++V AI QRLKL+ K P GLV++ G + G EK T FEP PI +Y C+++F+ E L E+LE + +G V+D TL G ++L + +P KH GGQS RF RL H ++++ E Sbjct: 23 RGRGTELVSVYIPPDRQISDVAKHMREELSQSANIKSKQTKKNVQSAIEVIMQRLKLFPKPPEKGLVMFVGMVPRGGPGTEKMETYVFEPPEPIKTYIYHCNSEFYLEPLREMLEEKETYGLAVLDRKEATIATLKGKRIDILKTLTSGVPGKHKAGGQSQRRFDRLIDLAAHEFLKRIGE 203
BLAST of CN186510 vs. ExPASy Swiss-Prot
Match: RF1_HALWD (Peptide chain release factor subunit 1 OS=Haloquadratum walsbyi (strain DSM 16790) GN=prf1 PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.010e-27 Identity = 71/180 (39.44%), Postives = 103/180 (57.22%), Query Frame = 1 Query: 169 GNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPP-NGLVLYTGTIVTDDGKEKKVTIDFE-PFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTA 702 G+GT ++++ +PP QVS V + E ASNIKS+ R +V A+TS + RL+ Y+ PP NG+VL++G + T G+ VT E P P+ + Y CD+ F T+ L ++L FG IV+D G L G E + S +P K +GGQSA RFARLR+E N+ ++ A Sbjct: 29 GSGTQLVTIYIPPDRQVSDVVAHITQEHSEASNIKSKQTRTNVQDALTSIKDRLRYYDTYPPDNGIVLFSGAVSTGGGQTTMVTRSLESPPEPVQSFRYHCDSDFLTDPLEDMLADKGLFGLIVLDRREANVGWLKGKRVEPVKSASSLVPGKQRKGGQSAQRFARLRLEAIDNFYQEVA 208
BLAST of CN186510 vs. ExPASy Swiss-Prot
Match: RF1_METST (Peptide chain release factor subunit 1 OS=Methanosphaera stadtmanae (strain DSM 3091) GN=prf1 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.837e-27 Identity = 63/178 (35.39%), Postives = 100/178 (56.18%), Query Frame = 1 Query: 166 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVT-DDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRK 696 +G GT ++S+ +PP Q+S V K + DE G ++NIKS+ R++V AI QRLKL+ K P GLV++ G I G EK T F+P + Y CD++F E L +++E + +G +V+D + TL G +++ + +P KH GGQS RF R+ H ++++ Sbjct: 23 KGRGTELVSVYIPPEKQISDVAKQMRDELGQSANIKSKQTRKNVQSAIEVIIQRLKLFPKPPEKGLVMFVGMIPKGGPGTEKMETYVFQPPEAVQTYTYHCDSQFFVEPLKQIIEYKEVYGVVVLDRKESTIATLRGKRIDIIKHLTSGVPGKHKAGGQSQRRFDRVIELAAHEFLKR 200
BLAST of CN186510 vs. ExPASy Swiss-Prot
Match: RF1_METMA (Peptide chain release factor subunit 1 OS=Methanosarcina mazei GN=prf1 PE=1 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.545e-27 Identity = 64/180 (35.56%), Postives = 98/180 (54.44%), Query Frame = 1 Query: 166 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAE 705 +G T +ISL +PP Q+ VT L DE G A+NIKS++ R +V GAI S RL+ +KVP NG+V +TG + K + P PI Y CD+ F+ E L ++L+ + +G +V+D G L G + + +P K +GGQSA RF +LR+ H++ ++ + Sbjct: 23 KGRSTELISLYIPPDKQIFDVTNQLKDEHGQAANIKSKLTRTNVQGAIESLLSRLRYLDKVPENGIVYFTGAVDIGANKTSMESEVIVPPDPITVYKYHCDSSFYLEPLEDMLKDKNTYGLLVLDRREATIGLLVGKRIQPFRNLTSTVPGKQRKGGQSAHRFQQLRLIAIHDFYKRIGD 202
BLAST of CN186510 vs. ExPASy Swiss-Prot
Match: RF1_HALLT (Peptide chain release factor subunit 1 OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=prf1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.545e-27 Identity = 74/206 (35.92%), Postives = 107/206 (51.94%), Query Frame = 1 Query: 91 ADGQETDKNXXXXXXXXXXXXXXXXRGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPP-NGLVLYTGTIVTDDGKEKKVTIDFE-PFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTA 702 +D QE + G+GT ++++ +P QVS V + E ASNIKS+ R +V A+TS + RL+ Y+ PP NG+V+++G I G+ VT E P +P+ + Y CD+ F TE L +LE FG IV+D G L G E + S +P K +GGQSA RFARLR+E N+ ++ A Sbjct: 3 SDAQEASDDRRKYEFRKVIEELRDFEGSGTQLVTIYIPEDRQVSDVVAHVTQEHSEASNIKSKQTRTAVQDALTSIKDRLRYYDTFPPENGMVIFSGAIDAGGGQTDMVTRTLESPPQPVESFRYHCDSAFLTEPLEHMLEDSGLFGLIVLDRREANVGWLKGKRVEPVKSASSLVPGKQRKGGQSAQRFARLRLEAIDNFYQEVA 208
BLAST of CN186510 vs. ExPASy Swiss-Prot
Match: RF1_METS3 (Peptide chain release factor subunit 1 OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=prf1 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.547e-27 Identity = 66/181 (36.46%), Postives = 97/181 (53.59%), Query Frame = 1 Query: 166 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVT-DDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAE 705 +G GT ++S+ +P Q+S V K + DE G ++NIKS+ R++V AI QR++L+ P NGLVL+ G I G EK T FEP PI Y C+N+F E L ++E + +G V+D TL G +L+ + +P KH GGQS RF R+ H + ++ E Sbjct: 23 KGRGTELVSVYIPHDKQISDVGKQMRDELGQSANIKSKQTRKNVQSAIEVIMQRIRLFKAAPENGLVLFVGMIPRGGPGTEKMETYVFEPPEPITTYWYQCNNEFFLEPLEYMIEERETYGLAVIDRKEATIATLRGKKVNILNHLTSGVPGKHKAGGQSQRRFDRVIDLAAHEFKKRIGE 203
BLAST of CN186510 vs. ExPASy Swiss-Prot
Match: RF11_METAC (Peptide chain release factor subunit 1-1 OS=Methanosarcina acetivorans GN=prf11 PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.458e-26 Identity = 64/180 (35.56%), Postives = 96/180 (53.33%), Query Frame = 1 Query: 166 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAE 705 +G T +ISL +P Q+ VT L DE G A+NIKS++ R +V GAI S RL+ +KVP NG+V +TG + K + P PI Y CD+ F+ E L ++L+ FG +V+D G L G + + +P K +GGQSA RF +LR+ H++ ++ + Sbjct: 23 KGRSTELISLYIPADKQIFDVTNQLKDEHGQAANIKSKLTRTNVQGAIESLLSRLRYLDKVPENGIVYFTGAVDIGANKTSMESEVIIPPEPITVYKYHCDSSFYLEPLEDMLKDKSTFGLLVLDRREATIGLLVGKRIQAFRNLTSTVPGKQRKGGQSAHRFQQLRLIAIHDFYKRIGD 202
BLAST of CN186510 vs. ExPASy Swiss-Prot
Match: RF1_METBU (Peptide chain release factor subunit 1 OS=Methanococcoides burtonii (strain DSM 6242) GN=prf1 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.904e-26 Identity = 65/180 (36.11%), Postives = 97/180 (53.89%), Query Frame = 1 Query: 166 RGNGTSMISLIMPPRDQVSRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAE 705 +G GT +ISL +PP Q+S V L +E ASNIKS++ + +V GAI S RL+ Y VP NG+V +TG + K T EP +PI Y CD+ F L ++L+ +G +V+D G L+G E + +P K +GGQSA RF +LR+ H++ ++ + Sbjct: 23 KGRGTELISLYIPPDKQISDVVSQLRNEHSQASNIKSKLTKTNVQGAIDSIMSRLR-YGTVPENGIVYFTGAVDVGANKTNMETTIVEPPQPIITYRYHCDSSFFLTPLEDMLKEAKTYGLLVLDRREATVGLLTGKQIEAFRNLTSTVPGKQRKGGQSAHRFQQLRLIAIHDFYKRIGD 201 The following BLAST results are available for this feature:
BLAST of CN186510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186510 ID=CN186510; Name=CN186510; organism=Citrus sinensis; type=EST; length=707bpback to top |