CN186508

Overview
NameCN186508
Unique NameCN186508
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL19_ARATH (Putative germin-like protein subfamily 1 member 9 OS=Arabidopsis thaliana GN=At5g38910 PE=2 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 7.329e-68
Identity = 132/221 (59.73%), Postives = 151/221 (68.33%), Query Frame = 1
Query:   28 MKAIQFLIGFAVXXXXXXXXXXYDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKFI 690
            MK+  FL   ++           DPS LQD CV +N P DGVFVNGKFCKDPKL   EDFFF+GL +      + G + T  NV  +PGLNTLGIS  RIDY  YGQ PPH HPRASE+L V  GTL VGFVTS+   N L SK L +GD FVFP GLIHFQ N+GK  AVA++ L+SQ PG ITIAD VFG+NP I+P FLA AFQ+DPK V DLQ KFI
Sbjct:    1 MKSFSFLAVLSILAITLSLSKASDPSSLQDFCVGVNTPADGVFVNGKFCKDPKLVTVEDFFFTGLHEARPPNPKTGSNVTAVNVNNLPGLNTLGISLVRIDYGVYGQNPPHTHPRASEVLYVAVGTLFVGFVTSNP-ENRLFSKTLYEGDVFVFPQGLIHFQVNVGKYPAVAFAGLSSQNPGVITIADTVFGSNPQIDPSFLASAFQVDPKIVMDLQTKFI 220          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL111_ARATH (Germin-like protein subfamily 1 member 11 OS=Arabidopsis thaliana GN=At5g38940 PE=2 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 4.021e-66
Identity = 133/222 (59.91%), Postives = 156/222 (70.27%), Query Frame = 1
Query:   22 ITMKAIQFLIGFAVXXXXXXXXXXYDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            + MK++ FL   ++           DPS LQD CV+ N   +GVFVNGKFCKDPKL  A+DFFFSGL       + +G   T  NV  + GLNTLGIS  RIDYA  GQ PPH HPRA+EIL+V +GTL VGFVTS+  +N L SKVLN+GD FVFP GLIHFQ NIGK  AVA++AL+SQ PG ITIA+ VFGANP INP  LAKAFQL+P+ V DLQ KF
Sbjct:    1 MAMKSLSFLAVLSLLALTLPLAIASDPSQLQDFCVSANTSANGVFVNGKFCKDPKLVTADDFFFSGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVNGQNPPHTHPRATEILVVEQGTLLVGFVTSNP-DNRLFSKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIANTVFGANPAINPTILAKAFQLNPRVVMDLQTKF 221          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL12_ARATH (Putative germin-like protein subfamily 1 member 2 OS=Arabidopsis thaliana GN=At3g04150 PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.404e-65
Identity = 124/198 (62.63%), Postives = 146/198 (73.74%), Query Frame = 1
Query:   94 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            YDP+PLQD CVA N   + VFVNGKFCKDPKL  A DFF+SGL  PGNT+NRLG   TD +V +IPGLNTLGI+  R+D+AP GQ PPHIHPRAS+I+LVL+G L VGFV+S+  N TL SK+L  GD F FPIGL+ F  N GKT+AVA   + SQ PG I I DAVFG+NP I+P  LAKAF LD   V+ +Q  F
Sbjct:   25 YDPNPLQDYCVATNGT-NRVFVNGKFCKDPKLVTANDFFYSGLNIPGNTSNRLGASVTDVDVRRIPGLNTLGIAIARLDFAPGGQLPPHIHPRASQIILVLKGQLSVGFVSSNDYNYTLFSKILYPGDVFAFPIGLVQFHANTGKTHAVAIGVVGSQDPGVIPIGDAVFGSNPLIDPKLLAKAFALDVNIVRHVQRVF 221          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL110_ARATH (Germin-like protein subfamily 1 member 10 OS=Arabidopsis thaliana GN=At5g38930 PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.404e-65
Identity = 131/222 (59.01%), Postives = 155/222 (69.82%), Query Frame = 1
Query:   22 ITMKAIQFLIGFAVXXXXXXXXXXYDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            + MK++ FL   ++           DPS LQD CV+ N+  +GVFVNGKFCKDPKL  A+DFFF GL       + +G   T  NV  + GLNTLGIS  RIDYA  GQ PPH HPRA+EIL+V  GTL VGFVTS+  +N L +KVLN+GD FVFP GLIHFQ NIGK  AVA++AL+SQ PG ITIA  VFGANP INP+ LAKAFQ+DP+ V DLQ KF
Sbjct:    1 MAMKSLSFLAALSLLALTLPLTIASDPSQLQDFCVSANSSANGVFVNGKFCKDPKLVTADDFFFPGLQTARPITSPVGSTVTAVNVNNLLGLNTLGISLVRIDYAVDGQNPPHTHPRATEILVVELGTLLVGFVTSNP-DNRLFTKVLNEGDVFVFPEGLIHFQANIGKAPAVAFAALSSQNPGVITIAPTVFGANPAINPNILAKAFQVDPRVVMDLQTKF 221          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL112_ARATH (Putative germin-like protein subfamily 1 member 12 OS=Arabidopsis thaliana GN=At5g38960 PE=2 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.689e-64
Identity = 124/198 (62.63%), Postives = 147/198 (74.24%), Query Frame = 1
Query:   97 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNT-ANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            DPSPLQD C+ +N P + +FVNGKFCKDPKL  A+DF+FSGL K   T ++ +G + T  NV QIPGLNTLGIS  RIDY   GQ PPH HPRA+EILLV EGTL VGF +S    N L +K LNKGD FVFP GLIHFQ NIGK  AVA+++L+SQ PG I I + +FG+ PPI+P+ LAKAFQLDPK +  LQ KF
Sbjct:   26 DPSPLQDFCIGVNTPANALFVNGKFCKDPKLVTADDFYFSGLDKARTTESSPVGSNVTTVNVNQIPGLNTLGISLVRIDYGINGQNPPHTHPRATEILLVQEGTLFVGFFSSFP-ENRLFNKTLNKGDVFVFPEGLIHFQVNIGKQPAVAFASLSSQNPGVIIIGNTLFGSKPPIDPNVLAKAFQLDPKVIIQLQKKF 222          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL13_ARATH (Germin-like protein subfamily 1 member 3 OS=Arabidopsis thaliana GN=At3g04170 PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.339e-61
Identity = 123/198 (62.12%), Postives = 144/198 (72.73%), Query Frame = 1
Query:   94 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            YDPSPLQD CVA+   K+GVFVNG+FCKDPKL  ++DFF SGL  PGNT  RLG     AN   IPGLNTLG+   RID+AP G  PPHIHPRASEI+LV++G L VGFV+S+  N TL SK+L  GD FV PIGL+ F  NIGKTNAVA  A+ SQ PG I++ DAVFG+ PPI+P  LAKAF LD   V+ L+  F
Sbjct:   25 YDPSPLQDYCVAVPE-KNGVFVNGEFCKDPKLVTSDDFFASGLNIPGNTNKRLGSFVNPAN---IPGLNTLGVGIARIDFAPGGLIPPHIHPRASEIILVIKGKLLVGFVSSNDYNYTLFSKILYPGDVFVHPIGLVQFHANIGKTNAVAIGAVGSQNPGYISVGDAVFGSKPPIDPKILAKAFALDINIVRYLRKVF 218          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL16_ARATH (Germin-like protein subfamily 1 member 6 OS=Arabidopsis thaliana GN=At3g04200 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.933e-60
Identity = 120/198 (60.61%), Postives = 143/198 (72.22%), Query Frame = 1
Query:   94 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            YDP+PLQD CVA +   + VFVNGKFCKDPK   A DF +SGL    NT N LG + T  +V +IPGLNTLG+S  R+D+A  GQ PPHIHPRA+EIL+V +G L VGFV+S+Q NN L  KVL +GD FVFPIGLIHFQ N+ +T AVA++   SQ PG I IADAVFG+NP I  + LAKAFQLD K V+ L   F
Sbjct:   26 YDPNPLQDFCVAASET-NRVFVNGKFCKDPKSVTANDFSYSGLNIARNTTNFLGSNVTTVDVNKIPGLNTLGVSLARLDFAQGGQNPPHIHPRATEILVVTKGKLLVGFVSSNQDNNRLFYKVLKRGDVFVFPIGLIHFQMNVRRTRAVAFAGFGSQNPGTIRIADAVFGSNPSIPQEVLAKAFQLDVKLVRFLHIVF 222          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL21_ORYSJ (Putative germin-like protein 2-1 OS=Oryza sativa subsp. japonica GN=Os02g0491600 PE=3 SV=1)

HSP 1 Score: 231.106 bits (588), Expect = 4.306e-60
Identity = 122/197 (61.93%), Postives = 142/197 (72.08%), Query Frame = 1
Query:   97 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            DPS LQD CVA  +    V VNG  CKDP     EDFFFSGL   GNT+NR G   T  NV QI GLNTLGIS  R+DYAPYG  PPHIHPRA+EIL +LEG+L+VGFVTS+   N L +KVLNKGD FVFP GLIHFQFN G  + +A +AL+SQ PG ITIA+AVFG+ P I+ D LAKAFQ++ K V  +Q +F
Sbjct:   23 DPSQLQDFCVA--DKMSQVLVNGFACKDPAAITVEDFFFSGLHMAGNTSNRQGSAVTGVNVAQISGLNTLGISLARVDYAPYGLNPPHIHPRATEILTILEGSLYVGFVTSNP-ENKLFTKVLNKGDVFVFPQGLIHFQFNYGTKDVIALAALSSQNPGVITIANAVFGSKPFISDDILAKAFQVEKKIVDRIQAQF 216          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL23_ORYSJ (Putative germin-like protein 2-3 OS=Oryza sativa subsp. japonica GN=Os02g0491800 PE=3 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.363e-58
Identity = 120/197 (60.91%), Postives = 141/197 (71.57%), Query Frame = 1
Query:   97 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            DPS LQD+CVA  +    V VNG  CKD +   AEDFFFSGL   GNT N+ G   T  NV Q+PGLNTLGIS  RIDYA +G  PPH HPRA+EIL VLEG+L+VGFVTS+   N L +KV+NKGD FVFP GL+HFQFN G T+AVA  AL+SQ PG IT+A+AVFG+ P I  D LAKAFQ++   V  +Q KF
Sbjct:   30 DPSHLQDLCVA--DKASTVRVNGVACKDGEDVAAEDFFFSGLHMAGNTTNKQGSAVTAVNVAQVPGLNTLGISLARIDYALHGLNPPHTHPRATEILTVLEGSLYVGFVTSNP-ENKLFTKVINKGDVFVFPKGLVHFQFNYGTTDAVAIVALSSQNPGVITVANAVFGSKPSITDDILAKAFQVEKTVVDQIQAKF 223          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL15_ARATH (Germin-like protein subfamily 1 member 5 OS=Arabidopsis thaliana GN=At3g04190 PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 4.031e-58
Identity = 117/198 (59.09%), Postives = 138/198 (69.70%), Query Frame = 1
Query:   94 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            Y+PSPLQD CVA N   +GV+VNGKFCKDPK   A DF+ SGL  PGNT+   GV  T  +V+++PGLNTLG+   RID+AP G  PPH HPR SEI LV++G L VGFV+S++ N TL +KVL  GD FVFP GLI F  NIGKTNAV  +A  SQ PG I I +AVFG+ P I+P  LAKAF LD   VK  Q  F
Sbjct:   25 YEPSPLQDYCVATNET-NGVYVNGKFCKDPKCVTANDFYTSGLNVPGNTSTGPGVKITVVDVKRMPGLNTLGVDIARIDFAPGGLYPPHTHPRGSEIFLVMKGKLFVGFVSSNEYNYTLFTKVLYPGDVFVFPKGLIQFHANIGKTNAVVIAATGSQNPGRIIIGNAVFGSKPLIDPKVLAKAFALDFNKVKYFQAVF 221          
The following BLAST results are available for this feature:
BLAST of CN186508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL19_ARATH7.329e-6859.73Putative germin-like protein subfamily 1 member 9 ... [more]
GL111_ARATH4.021e-6659.91Germin-like protein subfamily 1 member 11 OS=Arabi... [more]
GL12_ARATH3.404e-6562.63Putative germin-like protein subfamily 1 member 2 ... [more]
GL110_ARATH3.404e-6559.01Germin-like protein subfamily 1 member 10 OS=Arabi... [more]
GL112_ARATH1.689e-6462.63Putative germin-like protein subfamily 1 member 12... [more]
GL13_ARATH1.339e-6162.12Germin-like protein subfamily 1 member 3 OS=Arabid... [more]
GL16_ARATH1.933e-6060.61Germin-like protein subfamily 1 member 6 OS=Arabid... [more]
GL21_ORYSJ4.306e-6061.93Putative germin-like protein 2-1 OS=Oryza sativa s... [more]
GL23_ORYSJ2.363e-5860.91Putative germin-like protein 2-3 OS=Oryza sativa s... [more]
GL15_ARATH4.031e-5859.09Germin-like protein subfamily 1 member 5 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003A06_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186508 ID=CN186508; Name=CN186508; organism=Citrus sinensis; type=EST; length=691bp
ATTTAAAGTTCCTGTTAATTAATCACCATGAAGGCAATTCAATTTCTTAT
AGGTTTTGCTGTCTTGGCTTTGGCTTCTTCTTTGGCCTCTGCCTATGACC
CTAGCCCTCTTCAAGATATCTGTGTAGCCATCAATAACCCCAAGGATGGT
GTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAGCTTGCGAGAGCAGA
AGATTTCTTCTTTTCCGGGCTTGGCAAGCCTGGAAACACAGCAAATCGAC
TTGGTGTTGATGAAACAGATGCAAATGTGGAGCAAATTCCAGGACTCAAT
ACCCTTGGCATATCAGCATTCCGTATTGACTATGCGCCATATGGCCAAAG
GCCACCTCATATTCACCCCCGTGCCAGTGAAATCCTGTTGGTCCTGGAAG
GAACTCTTCACGTCGGTTTTGTGACATCAGACCAACTGAATAACACACTC
ATCTCAAAAGTTCTGAATAAGGGAGATGCTTTTGTGTTTCCAATTGGTTT
GATTCATTTCCAATTCAACATTGGAAAAACAAATGCAGTTGCCTATTCTG
CTCTAAACAGCCAGTTCCCCGGTGAAATTACCATAGCCGACGCGGTCTTT
GGAGCCAATCCTCCAATCAATCCCGATTTTCTTGCCAAGGCGTTCCAGTT
GGACCCGAAGACAGTGAAAGATCTTCAGCATAAGTTCATTA
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