CN186508

Overview
NameCN186508
Unique NameCN186508
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL811_ORYSJ (Germin-like protein 8-11 OS=Oryza sativa subsp. japonica GN=Os08g0190100 PE=1 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 5.448e-55
Identity = 119/199 (59.80%), Postives = 143/199 (71.86%), Query Frame = 1
Query:   97 DPSPLQDICVA-INNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTN-AVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            DPSPLQD CVA +++P   V VNG  C +PK   A+ FF + +       N++G + T  NV QIPGLNTLGIS  RIDYAP GQ PPH HPRA+EIL VLEGTL+VGFVTS+  +N   SKVLNKGD FVFP+GLIHFQFN      AVA +AL+SQ PG ITIA+AVFG+ PPI+ D LAKAFQ++  T+  LQ +F
Sbjct:   24 DPSPLQDFCVADMHSP---VLVNGFACLNPKDVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNP-DNKFFSKVLNKGDVFVFPVGLIHFQFNPNPYKPAVAIAALSSQNPGAITIANAVFGSKPPISDDVLAKAFQVEKGTIDWLQAQF 218          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL81_ORYSJ (Putative germin-like protein 8-1 OS=Oryza sativa subsp. japonica GN=Os08g0188900 PE=3 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.585e-54
Identity = 124/217 (57.14%), Postives = 149/217 (68.66%), Query Frame = 1
Query:   37 IQFLIGFAVXXXXXXXXXXYDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTA-NRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTN-AVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQ 678
            I FL+  A+           +PSPLQD CVA  N    V VNG  CK+P    A+DFF +  L KP +TA N++G + T  NV +IPGLNTLGIS  R+DYAP G  PPH HPRA+EI  VLEGTL+VGFVTS+  +N L SKVLNKGD FVFP GLIHFQFN+     A+A SA++SQ PG ITIA+AVF +NPPI+ D LAKAFQ+D K +  LQ
Sbjct:    5 ISFLLLAALIGMASWQAIAAEPSPLQDFCVADLN--SAVRVNGFACKNPTNVSADDFFKAAMLDKPRDTAVNKVGSNITLINVMEIPGLNTLGISIVRVDYAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSNP-DNKLFSKVLNKGDVFVFPKGLIHFQFNLDPHKPAIATSAISSQNPGIITIANAVFRSNPPISDDILAKAFQVDKKIIDLLQ 218          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL122_ORYSJ (Germin-like protein 12-2 OS=Oryza sativa subsp. japonica GN=Os12g0154800 PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 2.070e-54
Identity = 123/202 (60.89%), Postives = 142/202 (70.30%), Query Frame = 1
Query:   97 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTA-NRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLN--NTLISKVLNKGDAFVFPIGLIHFQFNIGKTN-AVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            DPSPLQD CVA  N    V VNG  CKD K    +DFF +  L KP +T  ++ G + T  NV ++ GLNTLGIS  RIDYAP GQ PPH HPRA+EIL VLEGTL+VGFVTS+Q N  N L +K LNKGD FVFP GLIHFQFN      AVA +AL+SQ PG ITIA+AVFG+N PI+ D LAKAFQ+D K V  LQ +F
Sbjct:   24 DPSPLQDFCVADRNSP--VHVNGFPCKDAKDVNVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVLEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSNSPISDDVLAKAFQVDKKAVDWLQAQF 223          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL41_ORYSJ (Germin-like protein 4-1 OS=Oryza sativa subsp. japonica GN=Os04g0617900 PE=2 SV=2)

HSP 1 Score: 211.846 bits (538), Expect = 2.704e-54
Identity = 118/200 (59.00%), Postives = 134/200 (67.00%), Query Frame = 1
Query:   97 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFF-SGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQL--NNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            DPS LQD CVA  +    VFVNG  CK+PK   A DFF    LG PGNT N  G   T   V ++PGLNTLGIS  RID+AP GQ PPH HPRA+EIL VL+GTL VGFVTS+Q    N   +K+L  GD FVFP GLIHFQ N G   AVA +AL+SQ PG ITIA+AVFG+ PPI  D LAKAF +D   V  +Q KF
Sbjct:   29 DPSQLQDFCVA--DKLSAVFVNGFVCKNPKQVTANDFFLPKALGVPGNTVNAQGSAVTPVTVNELPGLNTLGISFARIDFAPNGQNPPHTHPRATEILTVLQGTLLVGFVTSNQPGGGNLQFTKLLGPGDVFVFPQGLIHFQLNNGAVPAVAIAALSSQNPGVITIANAVFGSTPPILDDVLAKAFMIDKDQVDWIQAKF 226          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL85_ORYSJ (Germin-like protein 8-5 OS=Oryza sativa subsp. japonica GN=Os08g0189400 PE=2 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.531e-54
Identity = 120/199 (60.30%), Postives = 142/199 (71.36%), Query Frame = 1
Query:   97 DPSPLQDICVA-INNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTN-AVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            DPSPLQD CVA +++P   V VNG  C +P    A+ FF +         N++G + T  NV QIPGLNTLGIS  RIDYAP GQ PPH HPRA+EIL VLEGTL+VGFVTS+  NNTL SKVLNKGD FVFP GLIHFQFN      AVA +AL+SQ PG ITIA+AVFG+ PPI+ + LAKAFQ++  T+  LQ +F
Sbjct:   24 DPSPLQDFCVADMHSP---VRVNGFACLNPMEVNADHFFKAAKLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLNKGDVFVFPQGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDEVLAKAFQVEKGTIDWLQAQF 218          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL123_ORYSJ (Putative germin-like protein 12-3 OS=Oryza sativa subsp. japonica GN=Os12g0154900 PE=3 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.752e-53
Identity = 121/202 (59.90%), Postives = 142/202 (70.30%), Query Frame = 1
Query:   97 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGN-TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLN--NTLISKVLNKGDAFVFPIGLIHFQFNIGKTN-AVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            DPSPLQD+CVA  N    V VNG  CKD K    +DFF +  L KP + T ++ G + T  NV ++ GLNTLGIS  RIDYAP GQ PPH HPRA+EIL V+EG+L+VGFVTS+Q N  N L +K LNKGD FVFP GLIHFQFN      A A  AL+SQ PG ITIA+AVFG+NPPI+ D LAKAFQ+D K V  LQ +F
Sbjct:   24 DPSPLQDLCVADKNSP--VRVNGFPCKDAKDVSVDDFFLAANLDKPMDITKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILSVIEGSLYVGFVTSNQANGENKLFTKTLNKGDVFVFPEGLIHFQFNPSYDKPAAAIVALSSQNPGAITIANAVFGSNPPISDDVLAKAFQVDKKAVDWLQAQF 223          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GLP1_MESCR (Germin-like protein OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 6.659e-53
Identity = 102/171 (59.65%), Postives = 119/171 (69.59%), Query Frame = 1
Query:   97 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLN--NTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFG 603
            DP+ LQD CV +N P DG+FVNG FCKDP     +DF F GL  P NT N LG   T      +PGLNTLGIS  R+D+AP+G  PPH HPRA+E+ +VLEGT +VGFVTS+  +  N L +KVLNKGD FVFP GLIHFQ NIG    V  S L+SQ PG ITIA+AVFG
Sbjct:   24 DPTQLQDFCVGVNKPNDGLFVNGLFCKDPMEVNPDDFLFRGLNMPANTDNALGFAATLVTAANLPGLNTLGISVARLDFAPHGLNPPHTHPRATEVFVVLEGTFYVGFVTSNLADGGNKLFAKVLNKGDVFVFPQGLIHFQLNIGNYPGVGISGLSSQNPGVITIANAVFG 194          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL84_ORYSJ (Germin-like protein 8-4 OS=Oryza sativa subsp. japonica GN=GER1 PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 8.697e-53
Identity = 113/200 (56.50%), Postives = 140/200 (70.00%), Query Frame = 1
Query:   94 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTN-AVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            +DPSPLQD CVA  + K  V VNG  CK+P    ++DFF +     P +T N++G + T+ NV   PGLNTLGIS  RIDYAP G  PPHIHPRA+E+L VLEGTL+VGFVTS+   N L SKV++KGD FVFP  +IHFQ N+     AVA S+LNSQ PG ITIA AVFG+ PPI+ D L KAFQ++ K +  L+ +F
Sbjct:   24 FDPSPLQDFCVA--DMKSPVRVNGFPCKNPMEVNSDDFFNAAKFDMPRSTMNKVGSNVTNLNVLNFPGLNTLGISLARIDYAPLGVNPPHIHPRATELLTVLEGTLYVGFVTSNP--NRLFSKVVHKGDTFVFPKAMIHFQMNLDHNKPAVAQSSLNSQNPGVITIASAVFGSKPPISDDVLTKAFQVEKKVIDWLKSQF 219          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL124_ORYSJ (Putative germin-like protein 12-4 OS=Oryza sativa subsp. japonica GN=Os12g0155000 PE=3 SV=2)

HSP 1 Score: 206.068 bits (523), Expect = 1.484e-52
Identity = 119/202 (58.91%), Postives = 142/202 (70.30%), Query Frame = 1
Query:   97 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTA-NRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLN--NTLISKVLNKGDAFVFPIGLIHFQFNIGKTN-AVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            DPSPLQD CVA  +    V VNG  CKD K    +DFF +  L KP +T  ++ G + T  NV ++ GLNTL IS  RIDYAP GQ PPH HPRA+EIL VLEG+L+VGFVTS+Q N  N L +K LNKGD FVFP GLIHFQFN      AVA +AL+SQ PG ITIA+AVFG++PPI+ D LAKAFQ+D K +  LQ +F
Sbjct:   24 DPSPLQDFCVA--DKHSPVRVNGLPCKDAKDVSVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLSISMARIDYAPKGQNPPHTHPRATEILTVLEGSLYVGFVTSNQANRENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSHPPISDDVLAKAFQVDKKAMDWLQAQF 223          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL83_ORYSJ (Germin-like protein 8-3 OS=Oryza sativa subsp. japonica GN=GER2 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.316e-52
Identity = 111/200 (55.50%), Postives = 139/200 (69.50%), Query Frame = 1
Query:   94 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTN-AVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            +DPSPLQD CVA  +    V VNG  CK+P    ++DFF +     P NT N++G + T+ NV   PGLNTLGIS  RIDYAP G  PPH+HPRA+E+L VLEGTL+VGFVTS+   N L SKV++KGD FVFP  +IHFQ N+     AVA SAL+SQ PG ITIA A+FG+ PPI+ D L KAFQ++ K +  L+ +F
Sbjct:   24 FDPSPLQDFCVA--DMASPVRVNGFPCKNPMNVTSDDFFNAAKFDMPRNTMNKVGSNVTNLNVINFPGLNTLGISLARIDYAPMGVNPPHVHPRATELLTVLEGTLYVGFVTSNP--NRLFSKVVHKGDVFVFPKAMIHFQMNLDHNKPAVAQSALSSQNPGVITIASAIFGSTPPISDDVLVKAFQVEKKVIDWLKSQF 219          
The following BLAST results are available for this feature:
BLAST of CN186508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL811_ORYSJ5.448e-5559.80Germin-like protein 8-11 OS=Oryza sativa subsp. ja... [more]
GL81_ORYSJ1.585e-5457.14Putative germin-like protein 8-1 OS=Oryza sativa s... [more]
GL122_ORYSJ2.070e-5460.89Germin-like protein 12-2 OS=Oryza sativa subsp. ja... [more]
GL41_ORYSJ2.704e-5459.00Germin-like protein 4-1 OS=Oryza sativa subsp. jap... [more]
GL85_ORYSJ3.531e-5460.30Germin-like protein 8-5 OS=Oryza sativa subsp. jap... [more]
GL123_ORYSJ1.752e-5359.90Putative germin-like protein 12-3 OS=Oryza sativa ... [more]
GLP1_MESCR6.659e-5359.65Germin-like protein OS=Mesembryanthemum crystallin... [more]
GL84_ORYSJ8.697e-5356.50Germin-like protein 8-4 OS=Oryza sativa subsp. jap... [more]
GL124_ORYSJ1.484e-5258.91Putative germin-like protein 12-4 OS=Oryza sativa ... [more]
GL83_ORYSJ4.316e-5255.50Germin-like protein 8-3 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003A06_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186508 ID=CN186508; Name=CN186508; organism=Citrus sinensis; type=EST; length=691bp
ATTTAAAGTTCCTGTTAATTAATCACCATGAAGGCAATTCAATTTCTTAT
AGGTTTTGCTGTCTTGGCTTTGGCTTCTTCTTTGGCCTCTGCCTATGACC
CTAGCCCTCTTCAAGATATCTGTGTAGCCATCAATAACCCCAAGGATGGT
GTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAGCTTGCGAGAGCAGA
AGATTTCTTCTTTTCCGGGCTTGGCAAGCCTGGAAACACAGCAAATCGAC
TTGGTGTTGATGAAACAGATGCAAATGTGGAGCAAATTCCAGGACTCAAT
ACCCTTGGCATATCAGCATTCCGTATTGACTATGCGCCATATGGCCAAAG
GCCACCTCATATTCACCCCCGTGCCAGTGAAATCCTGTTGGTCCTGGAAG
GAACTCTTCACGTCGGTTTTGTGACATCAGACCAACTGAATAACACACTC
ATCTCAAAAGTTCTGAATAAGGGAGATGCTTTTGTGTTTCCAATTGGTTT
GATTCATTTCCAATTCAACATTGGAAAAACAAATGCAGTTGCCTATTCTG
CTCTAAACAGCCAGTTCCCCGGTGAAATTACCATAGCCGACGCGGTCTTT
GGAGCCAATCCTCCAATCAATCCCGATTTTCTTGCCAAGGCGTTCCAGTT
GGACCCGAAGACAGTGAAAGATCTTCAGCATAAGTTCATTA
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