CN186508

Overview
NameCN186508
Unique NameCN186508
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13737 contig Csv1_Contig13737:30..720. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL32_ORYSJ (Putative germin-like protein 3-2 OS=Oryza sativa subsp. japonica GN=Os03g0651800 PE=3 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.368e-50
Identity = 104/198 (52.53%), Postives = 134/198 (67.68%), Query Frame = 1
Query:   97 DPSPLQDICVAINNPKDGVF-VNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            DP  LQD+CVA      G   +NG  CK  +   A DFFF GL   GNT N +G   T A+VE++PGLNT+G+S  RIDYAP+G  PPH HPRA+EI+ V EGTL VGFVT+    N L ++ ++KG+ FVFP GL+HFQ N G T+A+A +A NSQ PG  +IAD +FGA PP+  D LA+AFQ+D   V+ ++ KF
Sbjct:   24 DPDMLQDVCVADYKSLRGPLRLNGIPCKRLENVTANDFFFDGLTNAGNTTNAVGSLVTAASVERLPGLNTMGVSMARIDYAPWGLSPPHTHPRATEIMFVAEGTLDVGFVTT---ANKLFTRTVSKGEVFVFPRGLVHFQRNSGNTSALAIAAFNSQLPGTQSIADTLFGAAPPLPSDTLARAFQVDGGMVESIKSKF 218          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL13_ORYSJ (Germin-like protein 1-3 OS=Oryza sativa subsp. japonica GN=GER8 PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.891e-50
Identity = 105/199 (52.76%), Postives = 136/199 (68.34%), Query Frame = 1
Query:   97 DPSPLQDICVA-INNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKFI 690
            DP  LQD+CVA   + K  + +NG  CK  +   A DFFF GL K GNT N +G   T A+VE +PGLNT+G+S  RIDYAP+G  PPH HPRA+EI+ V+EG+L VGFVT+    N L ++ + KG+ FVFP GL+HFQ N G T A A +ALNSQ PG  +IA A+FGA PP+  D LA+AFQ+D   V+ ++ KF+
Sbjct:   24 DPDMLQDVCVADYKSLKGPLRLNGFPCKRIENVTANDFFFDGLMKAGNTGNAVGSVVTAASVESLPGLNTMGVSMARIDYAPWGLNPPHTHPRATEIIFVVEGSLDVGFVTT---ANKLFTRTVCKGEVFVFPRGLVHFQKNNGNTPAFAIAALNSQLPGTQSIAAALFGAAPPLPSDTLARAFQVDGGMVEFIKSKFV 219          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL23_ARATH (Germin-like protein subfamily 2 member 3 OS=Arabidopsis thaliana GN=GLP8 PE=2 SV=1)

HSP 1 Score: 184.496 bits (467), Expect = 4.622e-46
Identity = 101/198 (51.01%), Postives = 126/198 (63.64%), Query Frame = 1
Query:   97 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANR-LGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            D + LQD CVA  +  +G+ VNG  CKDP     EDF+F GL     TAN  +G   T ANVE++PGLNTLG+S  RIDYAP G  PPH+HPRASE + VLEG L VGF+T+      LISK +NKGD FVFP  L+HFQ N  K  A   +A +SQ PG   +  ++FG+NPPI  D LAKAF      ++ ++ KF
Sbjct:   23 DTNMLQDFCVA--DLSNGLKVNGYPCKDPAKVTPEDFYFIGLATAAATANSSMGSAVTGANVEKVPGLNTLGVSISRIDYAPGGLNPPHLHPRASEAIFVLEGRLFVGFLTT---TGKLISKHVNKGDVFVFPKALLHFQQNPNKAPASVLAAFDSQLPGTQVVGPSLFGSNPPIPDDLLAKAFGAAAPEIQKIKGKF 215          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL14_ORYSJ (Germin-like protein 1-4 OS=Oryza sativa subsp. japonica GN=Os01g0952100 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.345e-45
Identity = 104/204 (50.98%), Postives = 135/204 (66.18%), Query Frame = 1
Query:   97 DPSPLQDICVAINNPKDGVF-VNGKFCKDPKLARAEDFFFSGLGKPGN--TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYG-QRPPHIHPRASEILLVLEGTLHVGFV--TSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINP-DFLAKAFQLDPKTVKDLQHKF 687
            DP  LQDICVA      G   VNG  CK      AEDFFF GLGKP +  + N +G   T A VE+IPGLNTLG+S  R+DYAP+G   PPH HPRA+EIL V +G L VGFV  T+   ++ LI++V+ KG  FVFP GL+H++ ++G+  AVA SA +SQ PG    ADA+FG++ P  P D LA+AFQ+D   V++++ KF
Sbjct:   29 DPDMLQDICVADYKSLQGPLRVNGFPCKPEANVTAEDFFFPGLGKPADVYSGNPMGSAVTAATVERIPGLNTLGVSMARVDYAPWGGANPPHSHPRATEILFVADGLLEVGFVVATAAPASSRLITRVVPKGGVFVFPRGLLHYERSVGEKPAVAISAFDSQLPGTQAAADALFGSSSPAVPTDVLARAFQVDGGVVENIKSKF 232          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL11_ORYSJ (Germin-like protein 1-1 OS=Oryza sativa subsp. japonica GN=GER4 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.996e-45
Identity = 100/197 (50.76%), Postives = 124/197 (62.94%), Query Frame = 1
Query:   97 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            DP  LQD+CVA  +    V +NG  CK      A+DFFF+GL  PGNT N  G + T ANV+  PG+NTLG+S  RIDYAP GQ PPH HPRA+EI+ VLEG L VGF+T+    N L +K +  G+ FVFP GL+HFQ N G   A   +A NSQ  G   IA  +F A PP+  D LAKAF++D   V  ++ KF
Sbjct:   26 DPDMLQDVCVA--DLASPVKLNGFPCKAN--VTADDFFFAGLKNPGNTNNPAGSNVTAANVQSFPGVNTLGVSMARIDYAPGGQNPPHTHPRATEIIFVLEGVLEVGFITT---ANKLFTKTVTAGEVFVFPRGLVHFQQNRGHGPAAVIAAFNSQLQGTQAIAATLFAAAPPVPSDVLAKAFRVDVPQVDAIKAKF 215          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL24_ARATH (Germin-like protein subfamily 2 member 4 OS=Arabidopsis thaliana GN=GLP10 PE=2 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 3.913e-45
Identity = 99/199 (49.75%), Postives = 123/199 (61.81%), Query Frame = 1
Query:   94 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTN-AVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            YDP  LQD+CVA  +   G+ VNG  CK      A DFFF+G+GKP    N +G   T ANVE+I GLNTLG+S  RIDYAP G  PPH HPRA+E++ VLEG L VGF+T+    N L +K + KG+ FVFP GLIH+Q N  K   A   SA NSQ PG  +IA  +F A P I    L   FQ+  K ++ ++ KF
Sbjct:   22 YDPDTLQDLCVA--DRTSGIKVNGFTCKPESNITASDFFFAGIGKPAVVNNTVGSAVTGANVEKIAGLNTLGVSLARIDYAPGGLNPPHTHPRATEVIFVLEGELDVGFITT---ANKLFAKTVKKGEVFVFPRGLIHYQKNNDKAKPASVISAFNSQLPGTQSIAATLFTATPAIPDHVLTTTFQIGTKEIEKIKSKF 215          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: NEC1_NICLS (Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana sanderae GN=NECI PE=1 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 5.111e-45
Identity = 100/197 (50.76%), Postives = 127/197 (64.47%), Query Frame = 1
Query:   97 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            D   LQD+CVA  + K  V VNG  CK      A DF    + KPG T N+ G   T ANVEQ+PGLNTLG+S  RIDYAP G  PPH HPRASE++ V+EG L VGF+T+    N L+SK + KG+ FVFP GL+HFQ N G+  A   SA NSQ PG  +I   +FGA+PP+  D LA+ FQ++ + V+ ++ KF
Sbjct:   34 DEDMLQDVCVADLHSK--VKVNGFPCKTN--FTAADFSSLAISKPGATNNKFGSVVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITT---ANVLVSKKIIKGEVFVFPRGLVHFQKNNGEVPAAVISAFNSQLPGTQSIPITLFGASPPVPDDVLAQTFQINTEDVQQIKSKF 223          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: NEC1_NICPL (Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 8.717e-45
Identity = 100/197 (50.76%), Postives = 126/197 (63.96%), Query Frame = 1
Query:   97 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            D   LQD+CVA  + K  V VNG  CK      A DF    + KPG T N+ G   T ANVEQ+PGLNTLG+S  RIDYAP G  PPH HPRASE++ V+EG L VGF+T+    N L+SK + KG+ FVFP GL+HFQ N GK  A   SA NSQ PG  +I   +FGA+P +  D LA+ FQ++ + V+ ++ KF
Sbjct:   34 DEDMLQDVCVADLHSK--VKVNGFPCKTN--FTAADFSSFAISKPGATNNKFGSKVTTANVEQVPGLNTLGVSLARIDYAPGGINPPHTHPRASEMVFVMEGELDVGFITT---ANVLVSKQITKGEVFVFPRGLVHFQKNNGKIPAAVVSAFNSQLPGTQSIPITLFGASPTVPDDVLAQTFQINIEDVQQIKSKF 223          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL22_ARATH (Germin-like protein subfamily 2 member 2 OS=Arabidopsis thaliana GN=At1g02335 PE=2 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.139e-44
Identity = 94/197 (47.72%), Postives = 122/197 (61.93%), Query Frame = 1
Query:   94 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHK 684
            YDP  LQD+CVA  +   G  +NG  CK+       DFFF+G+ KP    + +G   T ANVE+IPGLNTL +S  RIDYAP G  PPH HPRA+E++ VLEG L VGF+T+    N L +K +  G+ FVFP GL+HFQ N GK+ A   SA NSQ PG  ++A  +F A P +  D L K FQ+  K V  ++ +
Sbjct:   23 YDPDALQDLCVA--DKSHGTKLNGFPCKETLNITESDFFFAGISKPAVINSTMGSAVTGANVEKIPGLNTLSVSLARIDYAPGGLNPPHTHPRATEVVYVLEGELEVGFITT---ANKLFTKTIKIGEVFVFPRGLVHFQKNNGKSPASVLSAFNSQLPGTASVAATLFAAEPALPEDVLTKTFQVGSKMVDKIKER 214          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL52_ORYSJ (Germin-like protein 5-1 OS=Oryza sativa subsp. japonica GN=Os05g0277500 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.942e-44
Identity = 98/196 (50.00%), Postives = 124/196 (63.27%), Query Frame = 1
Query:   97 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHK 684
            DP  LQDICVA  +    V VNG  CK       +DF+F GL   GNT N  G   T ANVE++PGLNTLG+S  RIDYAP G  PPH HPRA+E++ VL+GTL VGF+T+    N L +K ++ GD FVFP GL+HFQ N G T A   SA NSQ PG  ++A  +F A+P +    L KAFQ+  K V+ ++ +
Sbjct:   27 DPDLLQDICVA--DLTSAVKVNGFACK--AAVTEDDFYFKGLAAAGNTNNTYGSVVTGANVEKLPGLNTLGVSMSRIDYAPGGLNPPHTHPRATEMVFVLQGTLDVGFITT---ANKLYTKTISAGDVFVFPRGLLHFQKNNGDTPAAVISAFNSQLPGTQSLAMTLFAASPEVPDGVLTKAFQVGTKEVEKIKSR 215          
The following BLAST results are available for this feature:
BLAST of CN186508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL32_ORYSJ2.368e-5052.53Putative germin-like protein 3-2 OS=Oryza sativa s... [more]
GL13_ORYSJ6.891e-5052.76Germin-like protein 1-3 OS=Oryza sativa subsp. jap... [more]
GL23_ARATH4.622e-4651.01Germin-like protein subfamily 2 member 3 OS=Arabid... [more]
GL14_ORYSJ1.345e-4550.98Germin-like protein 1-4 OS=Oryza sativa subsp. jap... [more]
GL11_ORYSJ2.996e-4550.76Germin-like protein 1-1 OS=Oryza sativa subsp. jap... [more]
GL24_ARATH3.913e-4549.75Germin-like protein subfamily 2 member 4 OS=Arabid... [more]
NEC1_NICLS5.111e-4550.76Nectarin-1 OS=Nicotiana langsdorffii x Nicotiana s... [more]
NEC1_NICPL8.717e-4550.76Nectarin-1 OS=Nicotiana plumbaginifolia GN=NEC1 PE... [more]
GL22_ARATH1.139e-4447.72Germin-like protein subfamily 2 member 2 OS=Arabid... [more]
GL52_ORYSJ1.942e-4450.00Germin-like protein 5-1 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003A06_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186508 ID=CN186508; Name=CN186508; organism=Citrus sinensis; type=EST; length=691bp
ATTTAAAGTTCCTGTTAATTAATCACCATGAAGGCAATTCAATTTCTTAT
AGGTTTTGCTGTCTTGGCTTTGGCTTCTTCTTTGGCCTCTGCCTATGACC
CTAGCCCTCTTCAAGATATCTGTGTAGCCATCAATAACCCCAAGGATGGT
GTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAGCTTGCGAGAGCAGA
AGATTTCTTCTTTTCCGGGCTTGGCAAGCCTGGAAACACAGCAAATCGAC
TTGGTGTTGATGAAACAGATGCAAATGTGGAGCAAATTCCAGGACTCAAT
ACCCTTGGCATATCAGCATTCCGTATTGACTATGCGCCATATGGCCAAAG
GCCACCTCATATTCACCCCCGTGCCAGTGAAATCCTGTTGGTCCTGGAAG
GAACTCTTCACGTCGGTTTTGTGACATCAGACCAACTGAATAACACACTC
ATCTCAAAAGTTCTGAATAAGGGAGATGCTTTTGTGTTTCCAATTGGTTT
GATTCATTTCCAATTCAACATTGGAAAAACAAATGCAGTTGCCTATTCTG
CTCTAAACAGCCAGTTCCCCGGTGAAATTACCATAGCCGACGCGGTCTTT
GGAGCCAATCCTCCAATCAATCCCGATTTTCTTGCCAAGGCGTTCCAGTT
GGACCCGAAGACAGTGAAAGATCTTCAGCATAAGTTCATTA
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