CN186508

Overview
NameCN186508
Unique NameCN186508
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length691
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13737 contig Csv1_Contig13737:30..720. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL34_ORYSJ (Putative germin-like protein 3-4 OS=Oryza sativa subsp. japonica GN=Os03g0693800 PE=3 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.103e-39
Identity = 90/199 (45.23%), Postives = 121/199 (60.80%), Query Frame = 1
Query:   97 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGN--TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            D  PLQD CVA  + K  V VNG  CK P  A  ++F FS     G    AN  G + T+ +V + PG+NTLG+S  R+D+AP G  PPH+HPRA+E+ +VL G L VG + +  + N   SKV+  G+ FV P GL+HFQFN+GKT A    + NSQ PG + +   +FG+NPPI    L KA ++D   V+ L+ KF
Sbjct:   30 DADPLQDFCVADLDSK--VTVNGHACK-PASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDMGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDTGVVELLKSKF 225          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL35_ORYSJ (Germin-like protein 3-5 OS=Oryza sativa subsp. japonica GN=Os03g0693900 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 1.881e-39
Identity = 90/199 (45.23%), Postives = 120/199 (60.30%), Query Frame = 1
Query:   97 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGN--TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            D  PLQD CVA  N +  V VNG  CK P  A  ++F FS     G    AN  G + T+ +V + PG+NTLG+S  R+D+AP G  PPH+HPRA+E+ +VL G L VG + +    N   SKV+  G+ FV P GL+HFQFN+GKT A    + NSQ PG + +   +FG+NPPI    L KA ++D   V+ L+ KF
Sbjct:   28 DADPLQDFCVADLNSE--VTVNGHACK-PASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDAGVVELLKSKF 223          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL36_ORYSJ (Germin-like protein 3-6 OS=Oryza sativa subsp. japonica GN=Os03g0694000 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 2.457e-39
Identity = 90/199 (45.23%), Postives = 120/199 (60.30%), Query Frame = 1
Query:   97 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGN--TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            D  PLQD CVA  + K  V VNG  CK P  A  ++F FS     G    AN  G + T+ +V + PG+NTLG+S  R+D+AP G  PPH+HPRA+E+ +VL G L VG + +    N   SKV+  G+ FV P GL+HFQFN+GKT A    + NSQ PG + +   +FG+NPPI    L KA ++D   V+ L+ KF
Sbjct:   30 DADPLQDFCVADLDSK--VTVNGHACK-PASAAGDEFLFSSKIATGGDVNANPNGSNVTELDVAEWPGVNTLGVSMNRVDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGTLDTGNRYYSKVVRAGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDAGVVELLKSKF 225          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL38_ORYSJ (Germin-like protein 3-8 OS=Oryza sativa subsp. japonica GN=Os03g0804700 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.208e-39
Identity = 89/204 (43.63%), Postives = 120/204 (58.82%), Query Frame = 1
Query:   97 DPSPLQDICVAINNPKDGVFVN-------GKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            DP P+QD CVA+  P+ G           G  CK      ++DFFF+GL    +T NR G + T AN E  PGLNTLG+S  R+D AP G  P H HPRA+E++ V+ G +  GFV++        SKVL +G+ FV P G+IHFQ+N+G   A   +A NSQ PG +     +FG++P I    LAK+FQ+D K +K L+ KF
Sbjct:   26 DPEPVQDFCVAVV-PRAGDAAAAACPAYPGFPCKPASTVVSDDFFFAGLAVASDTDNRFGFNVTAANAETFPGLNTLGVSIGRVDLAPGGVNPLHSHPRATELIHVVAGRVLAGFVST---AGEFYSKVLGEGETFVVPRGMIHFQYNVGGVAAQVITAFNSQMPGVVAAGSTLFGSDPEIPDAVLAKSFQVDAKIIKLLKSKF 225          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL37_ORYSJ (Germin-like protein 3-7 OS=Oryza sativa subsp. japonica GN=GER7 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 1.592e-38
Identity = 86/201 (42.79%), Postives = 120/201 (59.70%), Query Frame = 1
Query:   97 DPSPLQDICVAINNPKDGVFVNGKF----CKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            DP P+QD CVA+  P+ G   +  +    CK      ++DFFF+GL   G+T N  G      NVE  P LNTLG++  R+D AP G  P H HPRA+E++ V+ G + VGFV++        SKV+ +G+ F  P GL+HFQ+N G  +A A +  NSQ PG +  A A+FGA+P I    LAK+FQ+D + +K L+ KF
Sbjct:   36 DPEPIQDFCVAV--PRAGGEASPAYPGFPCKPASAVVSDDFFFAGLAAAGSTDNPFGASLKPGNVEAFPALNTLGVAINRVDLAPGGVNPLHSHPRAAELVHVITGRMLVGFVST---AGKYYSKVVGEGETFAIPRGLMHFQYNPGNASARAMTVFNSQLPGVVPAATALFGADPEIPDAVLAKSFQVDAEIIKLLKSKF 231          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL33_ORYSJ (Germin-like protein 3-3 OS=Oryza sativa subsp. japonica GN=Os03g0693700 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.080e-38
Identity = 90/198 (45.45%), Postives = 118/198 (59.60%), Query Frame = 1
Query:   97 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNT-ANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            DP PLQD CVA  + +  V +NG  CK    A  E  F S L   G+  AN  G + T  +V   PG+NTLG+S  RID+AP G  PPH+HPRA+E+ +VL G L VG + S    N   S+V+  G+ FV P GL+HFQFN+GKT A    + NSQ PG + +   +FG+NPPI    L KA ++D   V+ L+ KF
Sbjct:   28 DPDPLQDFCVADLDSE--VTLNGYPCKPTPAAGDEFLFSSRLATGGDVNANPNGSNVTQLDVAGWPGVNTLGVSMNRIDFAPGGTNPPHVHPRATEVGIVLRGELLVGIIGSLDTGNRYYSRVVRGGETFVIPRGLMHFQFNVGKTEATMVVSFNSQNPGIVFVPLTLFGSNPPIPTPVLVKALRVDAGVVELLKSKF 223          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL12_ORYSJ (Germin-like protein 1-2 OS=Oryza sativa subsp. japonica GN=Os01g0705100 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 8.178e-35
Identity = 85/197 (43.15%), Postives = 113/197 (57.36%), Query Frame = 1
Query:   97 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            D  PLQDICVA  + +    V+G  CK      ++DFF   + +  +T+N  GV+ T A V   PGLNTLG+S  R D AP G  PPH HPRASE++LVL G + VGF T+    N L SKV+ + + FV P GL HFQ N+G  NA   +  +SQ PG +T   A+F   P +  + LAK F +    V  ++ KF
Sbjct:   30 DSPPLQDICVA--DLRAATAVDGFPCKPTASVVSDDFFCDAIVQAPSTSNPFGVNSTRATVSAFPGLNTLGLSITRTDLAPGGLNPPHSHPRASELVLVLSGEVMVGFTTA---ANRLFSKVVREKELFVVPRGLQHFQLNVGAGNASFVAMFDSQSPGLVTPTFALFATQPAMPMEVLAKTFLMGEDEVGAIKSKF 221          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL11_ARATH (Germin-like protein subfamily 1 member 1 OS=Arabidopsis thaliana GN=GLP7 PE=2 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.181e-33
Identity = 78/193 (40.41%), Postives = 117/193 (60.62%), Query Frame = 1
Query:   97 DPSPLQDICVAIN-NPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANR-LGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGK-TNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTV 666
            DP PLQD CV+   +    +F+NGK CKDP  A   DF  S L +PGNT  +   ++ T      +PGLNT+G++  R+D+   G  PPH+HPRASE+ + L+G L VGFV +   +  + ++ L+ G+ FVFP GLIHF +NI   ++A+A S L+SQ PG   ++ + F + PP   + L  A+ ++ + V
Sbjct:   19 DPDPLQDYCVSPPPSSHQQIFLNGKLCKDPTQASVSDFSTSALSRPGNTKTKPFMINVTVTTTANLPGLNTVGLTMARLDFGGSGVVPPHVHPRASEVTVCLDGVLLVGFVDT---SGRVFTQELHPGETFVFPKGLIHFLYNIDTVSSALAVSGLSSQNPGTQIVSLSSFISKPPFLVEVLKSAYDINGQDV 208          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GLT3_ARATH (Germin-like protein subfamily T member 3 OS=Arabidopsis thaliana GN=At1g74820 PE=2 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.654e-33
Identity = 79/195 (40.51%), Postives = 110/195 (56.41%), Query Frame = 1
Query:  103 SPLQDICVAINNPKDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            +P QD CVA  + +     +G  CK      +EDFF+SGL  P NT+N  G+    AN+   PGLNTLGIS + +  AP G   PH HP  +E  +V+EG++ VGF+T+   N TL SKV+  GD FV P GLIH++ N+GKT     + +    P E+ +   +    P I  + L  AF+ D KT+  L+ KF
Sbjct:   38 NPFQDFCVA--DLQATPTNSGYPCKSQ--VTSEDFFYSGLNTPLNTSNPKGIAANPANLLTFPGLNTLGISMYNVAIAPGGYNQPHSHPGVTEAGVVIEGSVLVGFLTT---NYTLYSKVIGPGDMFVIPPGLIHYEGNVGKTQCRLLTVVADDLPSEVGVPHTLLATKPAIPNEVLISAFKADSKTINMLRSKF 225          
BLAST of CN186508 vs. ExPASy Swiss-Prot
Match: GL32_ARATH (Germin-like protein subfamily 3 member 2 OS=Arabidopsis thaliana GN=At3g10080 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.705e-32
Identity = 82/200 (41.00%), Postives = 107/200 (53.50%), Query Frame = 1
Query:   97 DPSPLQDICVA--INNP-KDGVFVNGKFCKDPKLARAEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAKAFQLDPKTVKDLQHKF 687
            DP P+QD C+   + +P  D  F     CK+      EDF FSGL   GN     G        E  PGLNTLGIS  R D  P    PPH HPRA+E+  +++G ++ GFV S   NN + +KV+ +G+  V+P GL+HFQ N+G   A     LNSQ PG   I   VFG+   IN + L KAF L  K +  L+ +F
Sbjct:   26 DPDPIQDFCIPKPVTSPYHDHHFSTNLPCKNSSEVTTEDFVFSGLKTAGNFTET-GFATVPVGPENFPGLNTLGISFVRADLKPGSINPPHYHPRATEVAHLVKGRVYSGFVDS---NNKVYAKVMEEGEMMVYPKGLVHFQMNVGDVTATIVGGLNSQNPGIQKIPSVVFGSG--INEELLMKAFGLSLKQIGTLKKRF 219          
The following BLAST results are available for this feature:
BLAST of CN186508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GL34_ORYSJ1.103e-3945.23Putative germin-like protein 3-4 OS=Oryza sativa s... [more]
GL35_ORYSJ1.881e-3945.23Germin-like protein 3-5 OS=Oryza sativa subsp. jap... [more]
GL36_ORYSJ2.457e-3945.23Germin-like protein 3-6 OS=Oryza sativa subsp. jap... [more]
GL38_ORYSJ3.208e-3943.63Germin-like protein 3-8 OS=Oryza sativa subsp. jap... [more]
GL37_ORYSJ1.592e-3842.79Germin-like protein 3-7 OS=Oryza sativa subsp. jap... [more]
GL33_ORYSJ2.080e-3845.45Germin-like protein 3-3 OS=Oryza sativa subsp. jap... [more]
GL12_ORYSJ8.178e-3543.15Germin-like protein 1-2 OS=Oryza sativa subsp. jap... [more]
GL11_ARATH1.181e-3340.41Germin-like protein subfamily 1 member 1 OS=Arabid... [more]
GLT3_ARATH7.654e-3340.51Germin-like protein subfamily T member 3 OS=Arabid... [more]
GL32_ARATH1.705e-3241.00Germin-like protein subfamily 3 member 2 OS=Arabid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0003A06_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003A06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186508 ID=CN186508; Name=CN186508; organism=Citrus sinensis; type=EST; length=691bp
ATTTAAAGTTCCTGTTAATTAATCACCATGAAGGCAATTCAATTTCTTAT
AGGTTTTGCTGTCTTGGCTTTGGCTTCTTCTTTGGCCTCTGCCTATGACC
CTAGCCCTCTTCAAGATATCTGTGTAGCCATCAATAACCCCAAGGATGGT
GTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAGCTTGCGAGAGCAGA
AGATTTCTTCTTTTCCGGGCTTGGCAAGCCTGGAAACACAGCAAATCGAC
TTGGTGTTGATGAAACAGATGCAAATGTGGAGCAAATTCCAGGACTCAAT
ACCCTTGGCATATCAGCATTCCGTATTGACTATGCGCCATATGGCCAAAG
GCCACCTCATATTCACCCCCGTGCCAGTGAAATCCTGTTGGTCCTGGAAG
GAACTCTTCACGTCGGTTTTGTGACATCAGACCAACTGAATAACACACTC
ATCTCAAAAGTTCTGAATAAGGGAGATGCTTTTGTGTTTCCAATTGGTTT
GATTCATTTCCAATTCAACATTGGAAAAACAAATGCAGTTGCCTATTCTG
CTCTAAACAGCCAGTTCCCCGGTGAAATTACCATAGCCGACGCGGTCTTT
GGAGCCAATCCTCCAATCAATCCCGATTTTCTTGCCAAGGCGTTCCAGTT
GGACCCGAAGACAGTGAAAGATCTTCAGCATAAGTTCATTA
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