EY665775
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_SYNS3 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain CC9311) GN=ispG PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 9.961e-29 Identity = 81/203 (39.90%), Postives = 117/203 (57.64%), Query Frame = 3 Query: 267 LLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLEDPDDEYQKELQHIEEGFIPLGENCKKYGRAWRIGLTLGNPFELLHELL*GSLPRGCV*SAFSLFERI 872 ++ Q+Y IH RR TRTVMVG+V IGSEHPI VQ+M DT D+ G+V ++R+AD G ++VR+T A A +I+++L + IPLVAD+H +AL VA+ DK+R+NPG F + ++ E +E+ I+E F PL + K+ +A RIG+ G+ E + G P+G V SA F RI Sbjct: 1 MMTASQRYDTKIH---RRVTRTVMVGDVPIGSEHPIAVQSMINEDTLDIDGSVAGILRLADAGCEIVRVTTPSIGHAKAMGKIRSALRAQGCKIPLVADVHHNGTRIALEVAKHVDKVRINPGLFVFDKPDPDRQEFSKEEFDAIGDRIKETFAPLVQVLKEQNKALRIGVNHGSLAERM-LFTYGDTPQGMVESAME-FVRI 198
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_SYNS9 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain CC9902) GN=ispG PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 6.456e-28 Identity = 80/198 (40.40%), Postives = 112/198 (56.57%), Query Frame = 3 Query: 282 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLEDPDDEYQKELQHIEEGFIPLGENCKKYGRAWRIGLTLGNPFELLHELL*GSLPRGCV*SAFSLFERI 872 ++Y IH RR TRTVMVG+V IGSEHPI VQ+M DT D+ G+V ++R+ D G ++VR+T A A +IK L K N+PLVAD+H +AL VA+ DK+R+NPG F + + E + E+ + I E F PL + ++ +A RIG+ G+ E + G P+G V SA F RI Sbjct: 6 RRYDTQIH---RRVTRTVMVGSVPIGSEHPIAVQSMINEDTLDIDGSVAGIIRLVDAGCEIVRVTTPSIGHAKAMGKIKAELSAKGCNVPLVADVHHNGTKIALEVAQHVDKVRINPGLFVFDKPDPNRQEFTESEFAEIGTRIRETFEPLVKLLREQNKALRIGVNHGSLAERM-LFTYGDTPKGMVESAME-FVRI 198
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_SYNJA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain JA-3-3Ab) GN=ispG PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.218e-26 Identity = 75/197 (38.07%), Postives = 107/197 (54.31%), Query Frame = 3 Query: 279 RQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLEDPDDEYQKELQHIEEGFIPLGENCKKYGRAWRIGLTLGNPFELLHELL*GSLPRGCV*SAFSLFE 866 +Q Y E ++ RR TRTV VGNV IGS+HP+ VQ+M DT D+ V + R+ + G+++VR+TV A A I++ L+Q +PLVAD+H +AL VA+ DK+R+NPG F + Q + E E + I E F PL + K +A RIG+ G+ E + + G P G V SA E Sbjct: 12 QQPYPEPVYP--RRPTRTVAVGNVLIGSQHPVVVQSMINEDTLDIDAAVAAIRRLHEAGSEIVRVTVPSMAHAKAMEAIRSKLIQTYKPVPLVADVHHNGIKIALEVAQYVDKVRINPGLFVLEKPQPGRTEYTQAELEAIRNKIRETFTPLVQTLKAQNKALRIGVNHGSLAERM-LFMYGDTPEGMVESALEYAE 205
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_SYNSC (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain CC9605) GN=ispG PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 2.077e-26 Identity = 77/198 (38.89%), Postives = 110/198 (55.56%), Query Frame = 3 Query: 282 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLEDPDDEYQKELQHIEEGFIPLGENCKKYGRAWRIGLTLGNPFELLHELL*GSLPRGCV*SAFSLFERI 872 ++Y IH RR TRTVMVG+V +GSEHPI VQ+M DT D+ V ++R+A+ G+++VR+T A A +I+ L Q+ ++PLVAD+H +AL VA+ DK+R+NPG F + + E +E+ Q I E F PL + +A RIG+ G+ E + G P G V SA F RI Sbjct: 6 RRYDTQIH---RRVTRTVMVGDVPVGSEHPIVVQSMINEDTLDIEAAVAGIIRLAEAGSEIVRVTTPSMAHAKAMGQIRKELRQRGCSVPLVADVHHNGVKIALEVAQHVDKVRINPGLFIFDKPDPNRQEFSPEEFAAIGQRIRETFEPLVTLLRDQNKALRIGVNHGSLAERM-LFTYGDTPEGMVESAME-FVRI 198
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_PROMP (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ispG PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.892e-26 Identity = 64/159 (40.25%), Postives = 97/159 (61.01%), Query Frame = 3 Query: 315 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLEDPDDEYQKELQHIEEGFIPLGENCKKYGRAWRIGLTLGN 788 RR TRTVMVG++AIGS++P+RVQ+M DT DV + + R+ + G ++VR+TV A A +IK L++ N + PLVAD+H +A+ VA+ DK+R+NPG F ++ + E D E++ + I + F PL E K +A RIG+ G+ Sbjct: 22 RRITRTVMVGDIAIGSDYPVRVQSMINEDTMDVDNSYLAIKRLHEVGCEIVRLTVPSLAHAKAVGDIKEKLIKNNIDTPLVADVHHNGMKIAMEVAKHVDKVRINPGLFVFEKSDPTRTEYTDTEFETIKKTILKRFTPLVEVLKSENKALRIGVNHGS 180
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_CHLTE (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlorobium tepidum GN=ispG PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 7.892e-26 Identity = 69/195 (35.38%), Postives = 107/195 (54.87%), Query Frame = 3 Query: 288 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEDPDDEYQKELQHIEEGFIPLGENCKKYGRAWRIGLTLGNPFELLHELL*GSLPRGCV*SAFSLFERI 872 Y ++ RR TR V G + +G PIRV++M T T D A +VE+ R+ + G +++R+TV +++A+ I+ L + + PLVADIHF+ A++ E + IR+NPGN+A A+F + DDEY+ EL + E F PL + G + RIG G+ + + G+ P G V +A F RI Sbjct: 66 YPAPVYSYRRRVTREVPFGTIFLGGYLPIRVESMITAHTMDTAASVEQCRRLYEAGCEIIRLTVPTEKDAENLKNIREQLRRDGIDTPLVADIHFSAKAAMKAVEFVENIRINPGNYA-TGAKFSSKDYTDDEYRAELDKVREEFTPLVRKARSLGVSMRIGTNHGSLSDRIVSRY-GNSPEGMVEAALE-FSRI 257
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_SYNPX (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain WH8102) GN=ispG PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.999e-25 Identity = 75/198 (37.88%), Postives = 110/198 (55.56%), Query Frame = 3 Query: 282 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLEDPDDEYQKELQHIEEGFIPLGENCKKYGRAWRIGLTLGNPFELLHELL*GSLPRGCV*SAFSLFERI 872 ++Y IH RR TRTVMVG+VAIGS+HP+ VQ+M DT D+ V ++R+A+ G+++VR+T A A EI+ ++ + +PLVAD+H +A+ VA+ DK+R+NPG F + + E D E+ I E F PL + +A RIG+ G+ E + G P+G V SA F RI Sbjct: 6 RRYDTQIH---RRITRTVMVGDVAIGSDHPVVVQSMINEDTLDIDAAVAGIVRLAEAGSEIVRVTTPSMAHARAMGEIRAAVRARGCTVPLVADVHHNGVKIAMEVAQHVDKVRINPGLFVFDKPDPNRQEFSDKEFAAIGARIHETFEPLVTLLRDQNKALRIGVNHGSLAERM-LFTYGDTPKGMVESAME-FVRI 198
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_SYNJB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. GN=ispG PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 3.917e-25 Identity = 73/192 (38.02%), Postives = 104/192 (54.17%), Query Frame = 3 Query: 279 RQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLEDPDDEYQKELQHIEEGFIPLGENCKKYGRAWRIGLTLGNPFELLHELL*GSLPRGCV*SA 851 +Q Y E ++ RR TRTV V +V IGS+HP+ VQ+M DT DV V + R+ + G+++VR+TV A A I+ L+Q +PLVAD+H +AL VA+ DK+R+NPG F + Q + E E++ I E F PL + K +A RIG+ G+ E + G P G V SA Sbjct: 12 QQPYPEPVYP--RRPTRTVAVADVLIGSQHPVVVQSMINEDTLDVDAAVAGIRRLHEAGSEIVRVTVPSMAHAKAMEAIREKLIQTYKPVPLVADVHHNGIKIALEVAKYVDKVRINPGLFVFEKPQPGRTEYTQAEFEAIRNKIRETFTPLVQTLKAQNKALRIGVNHGSLAERM-LFTYGDTPEGMVESA 200
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_PROMM (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Prochlorococcus marinus (strain MIT 9313) GN=ispG PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 5.116e-25 Identity = 78/198 (39.39%), Postives = 105/198 (53.03%), Query Frame = 3 Query: 282 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLEDPDDEYQKELQHIEEGFIPLGENCKKYGRAWRIGLTLGNPFELLHELL*GSLPRGCV*SAFSLFERI 872 ++Y IH RR TRTV VG V IGS+HP+RVQ+M DT DV G + R+ + G ++VR+TV A A EI L + +PLVAD+H +AL VA DK+R+NPG F +A ++ E +E + I E F PL K+ +A RIG+ G+ E + G P G V SA F RI Sbjct: 14 RRYDTQIH---RRVTRTVNVGGVLIGSDHPVRVQSMINEDTLDVEGATAGIRRLHEAGCEIVRLTVPSLGHAKAVGEICQRLRETYQPVPLVADVHHNGMKIALEVANHVDKVRINPGLFVFDKADPDRTEFSGEEIASIRERIAENFEPLVTRLKQQDKALRIGVNHGSLAERM-LFAYGDTPLGMVESAME-FVRI 206
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_PROMA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Prochlorococcus marinus GN=ispG PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 4.331e-24 Identity = 72/188 (38.30%), Postives = 101/188 (53.72%), Query Frame = 3 Query: 315 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLEDPDDEYQKELQHIEEGFIPLGENCKKYGRAWRIGLTLGNPFE-LLHELL*GSLPRGCV*SAFSLFERI 872 RRKTR+VMVGN+ IGS++P+ VQ+M DT D+ + + R+ + G ++VR+TV A A EIK L Q +PLVAD+H +AL VA+ DK+R+NPG F + E + E + I F P+ K +A RIG+ G+ E +L + G P G V SA F RI Sbjct: 24 RRKTRSVMVGNIGIGSDYPVAVQSMINEDTLDIEASTSAIRRLHEIGCEIVRLTVPSLSHAKAVGEIKRRLEQNYLPVPLVADVHHNGMKIALEVAKHVDKVRINPGLFVFSNPDPSRTEFSNSEISAIKEKIINNFEPIVNTLKAQNKALRIGVNHGSLAERMLFQY--GDTPLGMVESAME-FVRI 208 The following BLAST results are available for this feature:
BLAST of EY665775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 424
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665775 ID=EY665775; Name=EY665775; organism=Citrus sinensis; type=EST; length=878bpback to top |