EY665775

Overview
NameEY665775
Unique NameEY665775
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_SYNS3 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain CC9311) GN=ispG PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 9.961e-29
Identity = 81/203 (39.90%), Postives = 117/203 (57.64%), Query Frame = 3
Query:  267 LLVPRQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLEDPDDEYQKELQHIEEGFIPLGENCKKYGRAWRIGLTLGNPFELLHELL*GSLPRGCV*SAFSLFERI 872
            ++   Q+Y   IH   RR TRTVMVG+V IGSEHPI VQ+M   DT D+ G+V  ++R+AD G ++VR+T      A A  +I+++L  +   IPLVAD+H     +AL VA+  DK+R+NPG F   +   ++ E   +E+      I+E F PL +  K+  +A RIG+  G+  E +     G  P+G V SA   F RI
Sbjct:    1 MMTASQRYDTKIH---RRVTRTVMVGDVPIGSEHPIAVQSMINEDTLDIDGSVAGILRLADAGCEIVRVTTPSIGHAKAMGKIRSALRAQGCKIPLVADVHHNGTRIALEVAKHVDKVRINPGLFVFDKPDPDRQEFSKEEFDAIGDRIKETFAPLVQVLKEQNKALRIGVNHGSLAERM-LFTYGDTPQGMVESAME-FVRI 198          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_SYNS9 (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain CC9902) GN=ispG PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 6.456e-28
Identity = 80/198 (40.40%), Postives = 112/198 (56.57%), Query Frame = 3
Query:  282 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLEDPDDEYQKELQHIEEGFIPLGENCKKYGRAWRIGLTLGNPFELLHELL*GSLPRGCV*SAFSLFERI 872
            ++Y   IH   RR TRTVMVG+V IGSEHPI VQ+M   DT D+ G+V  ++R+ D G ++VR+T      A A  +IK  L  K  N+PLVAD+H     +AL VA+  DK+R+NPG F   +    + E  + E+ +    I E F PL +  ++  +A RIG+  G+  E +     G  P+G V SA   F RI
Sbjct:    6 RRYDTQIH---RRVTRTVMVGSVPIGSEHPIAVQSMINEDTLDIDGSVAGIIRLVDAGCEIVRVTTPSIGHAKAMGKIKAELSAKGCNVPLVADVHHNGTKIALEVAQHVDKVRINPGLFVFDKPDPNRQEFTESEFAEIGTRIRETFEPLVKLLREQNKALRIGVNHGSLAERM-LFTYGDTPKGMVESAME-FVRI 198          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_SYNJA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain JA-3-3Ab) GN=ispG PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.218e-26
Identity = 75/197 (38.07%), Postives = 107/197 (54.31%), Query Frame = 3
Query:  279 RQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLEDPDDEYQKELQHIEEGFIPLGENCKKYGRAWRIGLTLGNPFELLHELL*GSLPRGCV*SAFSLFE 866
            +Q Y E ++   RR TRTV VGNV IGS+HP+ VQ+M   DT D+   V  + R+ + G+++VR+TV     A A   I++ L+Q    +PLVAD+H     +AL VA+  DK+R+NPG F   + Q  + E    E +     I E F PL +  K   +A RIG+  G+  E +   + G  P G V SA    E
Sbjct:   12 QQPYPEPVYP--RRPTRTVAVGNVLIGSQHPVVVQSMINEDTLDIDAAVAAIRRLHEAGSEIVRVTVPSMAHAKAMEAIRSKLIQTYKPVPLVADVHHNGIKIALEVAQYVDKVRINPGLFVLEKPQPGRTEYTQAELEAIRNKIRETFTPLVQTLKAQNKALRIGVNHGSLAERM-LFMYGDTPEGMVESALEYAE 205          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_SYNSC (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain CC9605) GN=ispG PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 2.077e-26
Identity = 77/198 (38.89%), Postives = 110/198 (55.56%), Query Frame = 3
Query:  282 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLEDPDDEYQKELQHIEEGFIPLGENCKKYGRAWRIGLTLGNPFELLHELL*GSLPRGCV*SAFSLFERI 872
            ++Y   IH   RR TRTVMVG+V +GSEHPI VQ+M   DT D+   V  ++R+A+ G+++VR+T      A A  +I+  L Q+  ++PLVAD+H     +AL VA+  DK+R+NPG F   +    + E   +E+    Q I E F PL    +   +A RIG+  G+  E +     G  P G V SA   F RI
Sbjct:    6 RRYDTQIH---RRVTRTVMVGDVPVGSEHPIVVQSMINEDTLDIEAAVAGIIRLAEAGSEIVRVTTPSMAHAKAMGQIRKELRQRGCSVPLVADVHHNGVKIALEVAQHVDKVRINPGLFIFDKPDPNRQEFSPEEFAAIGQRIRETFEPLVTLLRDQNKALRIGVNHGSLAERM-LFTYGDTPEGMVESAME-FVRI 198          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_PROMP (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=ispG PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.892e-26
Identity = 64/159 (40.25%), Postives = 97/159 (61.01%), Query Frame = 3
Query:  315 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLEDPDDEYQKELQHIEEGFIPLGENCKKYGRAWRIGLTLGN 788
            RR TRTVMVG++AIGS++P+RVQ+M   DT DV  +   + R+ + G ++VR+TV     A A  +IK  L++ N + PLVAD+H     +A+ VA+  DK+R+NPG F   ++   + E  D E++   + I + F PL E  K   +A RIG+  G+
Sbjct:   22 RRITRTVMVGDIAIGSDYPVRVQSMINEDTMDVDNSYLAIKRLHEVGCEIVRLTVPSLAHAKAVGDIKEKLIKNNIDTPLVADVHHNGMKIAMEVAKHVDKVRINPGLFVFEKSDPTRTEYTDTEFETIKKTILKRFTPLVEVLKSENKALRIGVNHGS 180          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_CHLTE (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Chlorobium tepidum GN=ispG PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 7.892e-26
Identity = 69/195 (35.38%), Postives = 107/195 (54.87%), Query Frame = 3
Query:  288 YCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHFAPSVALRVAECFDKIRVNPGNFADRRAQFEQLEDPDDEYQKELQHIEEGFIPLGENCKKYGRAWRIGLTLGNPFELLHELL*GSLPRGCV*SAFSLFERI 872
            Y   ++   RR TR V  G + +G   PIRV++M T  T D A +VE+  R+ + G +++R+TV  +++A+    I+  L +   + PLVADIHF+   A++  E  + IR+NPGN+A   A+F   +  DDEY+ EL  + E F PL    +  G + RIG   G+  + +     G+ P G V +A   F RI
Sbjct:   66 YPAPVYSYRRRVTREVPFGTIFLGGYLPIRVESMITAHTMDTAASVEQCRRLYEAGCEIIRLTVPTEKDAENLKNIREQLRRDGIDTPLVADIHFSAKAAMKAVEFVENIRINPGNYA-TGAKFSSKDYTDDEYRAELDKVREEFTPLVRKARSLGVSMRIGTNHGSLSDRIVSRY-GNSPEGMVEAALE-FSRI 257          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_SYNPX (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain WH8102) GN=ispG PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.999e-25
Identity = 75/198 (37.88%), Postives = 110/198 (55.56%), Query Frame = 3
Query:  282 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLEDPDDEYQKELQHIEEGFIPLGENCKKYGRAWRIGLTLGNPFELLHELL*GSLPRGCV*SAFSLFERI 872
            ++Y   IH   RR TRTVMVG+VAIGS+HP+ VQ+M   DT D+   V  ++R+A+ G+++VR+T      A A  EI+ ++  +   +PLVAD+H     +A+ VA+  DK+R+NPG F   +    + E  D E+      I E F PL    +   +A RIG+  G+  E +     G  P+G V SA   F RI
Sbjct:    6 RRYDTQIH---RRITRTVMVGDVAIGSDHPVVVQSMINEDTLDIDAAVAGIVRLAEAGSEIVRVTTPSMAHARAMGEIRAAVRARGCTVPLVADVHHNGVKIAMEVAQHVDKVRINPGLFVFDKPDPNRQEFSDKEFAAIGARIHETFEPLVTLLRDQNKALRIGVNHGSLAERM-LFTYGDTPKGMVESAME-FVRI 198          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_SYNJB (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. GN=ispG PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.917e-25
Identity = 73/192 (38.02%), Postives = 104/192 (54.17%), Query Frame = 3
Query:  279 RQKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLEDPDDEYQKELQHIEEGFIPLGENCKKYGRAWRIGLTLGNPFELLHELL*GSLPRGCV*SA 851
            +Q Y E ++   RR TRTV V +V IGS+HP+ VQ+M   DT DV   V  + R+ + G+++VR+TV     A A   I+  L+Q    +PLVAD+H     +AL VA+  DK+R+NPG F   + Q  + E    E++     I E F PL +  K   +A RIG+  G+  E +     G  P G V SA
Sbjct:   12 QQPYPEPVYP--RRPTRTVAVADVLIGSQHPVVVQSMINEDTLDVDAAVAGIRRLHEAGSEIVRVTVPSMAHAKAMEAIREKLIQTYKPVPLVADVHHNGIKIALEVAKYVDKVRINPGLFVFEKPQPGRTEYTQAEFEAIRNKIRETFTPLVQTLKAQNKALRIGVNHGSLAERM-LFTYGDTPEGMVESA 200          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_PROMM (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Prochlorococcus marinus (strain MIT 9313) GN=ispG PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 5.116e-25
Identity = 78/198 (39.39%), Postives = 105/198 (53.03%), Query Frame = 3
Query:  282 QKYCESIHKTVRRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLEDPDDEYQKELQHIEEGFIPLGENCKKYGRAWRIGLTLGNPFELLHELL*GSLPRGCV*SAFSLFERI 872
            ++Y   IH   RR TRTV VG V IGS+HP+RVQ+M   DT DV G    + R+ + G ++VR+TV     A A  EI   L +    +PLVAD+H     +AL VA   DK+R+NPG F   +A  ++ E   +E     + I E F PL    K+  +A RIG+  G+  E +     G  P G V SA   F RI
Sbjct:   14 RRYDTQIH---RRVTRTVNVGGVLIGSDHPVRVQSMINEDTLDVEGATAGIRRLHEAGCEIVRLTVPSLGHAKAVGEICQRLRETYQPVPLVADVHHNGMKIALEVANHVDKVRINPGLFVFDKADPDRTEFSGEEIASIRERIAENFEPLVTRLKQQDKALRIGVNHGSLAERM-LFAYGDTPLGMVESAME-FVRI 206          
BLAST of EY665775 vs. ExPASy Swiss-Prot
Match: ISPG_PROMA (4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Prochlorococcus marinus GN=ispG PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 4.331e-24
Identity = 72/188 (38.30%), Postives = 101/188 (53.72%), Query Frame = 3
Query:  315 RRKTRTVMVGNVAIGSEHPIRVQTMTTNDTKDVAGTVEEVMRIADQGADLVRITVQGKREADACFEIKNSLVQKNYNIPLVADIHF-APSVALRVAECFDKIRVNPGNFADRRAQFEQLEDPDDEYQKELQHIEEGFIPLGENCKKYGRAWRIGLTLGNPFE-LLHELL*GSLPRGCV*SAFSLFERI 872
            RRKTR+VMVGN+ IGS++P+ VQ+M   DT D+  +   + R+ + G ++VR+TV     A A  EIK  L Q    +PLVAD+H     +AL VA+  DK+R+NPG F        + E  + E     + I   F P+    K   +A RIG+  G+  E +L +   G  P G V SA   F RI
Sbjct:   24 RRKTRSVMVGNIGIGSDYPVAVQSMINEDTLDIEASTSAIRRLHEIGCEIVRLTVPSLSHAKAVGEIKRRLEQNYLPVPLVADVHHNGMKIALEVAKHVDKVRINPGLFVFSNPDPSRTEFSNSEISAIKEKIINNFEPIVNTLKAQNKALRIGVNHGSLAERMLFQY--GDTPLGMVESAME-FVRI 208          
The following BLAST results are available for this feature:
BLAST of EY665775 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 424
Match NameE-valueIdentityDescription
ISPG_SYNS39.961e-2939.904-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_SYNS96.456e-2840.404-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_SYNJA1.218e-2638.074-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_SYNSC2.077e-2638.894-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_PROMP7.892e-2640.254-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_CHLTE7.892e-2635.384-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_SYNPX2.999e-2537.884-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_SYNJB3.917e-2538.024-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_PROMM5.116e-2539.394-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]
ISPG_PROMA4.331e-2438.304-hydroxy-3-methylbut-2-en-1-yl diphosphate syntha... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-095-D10-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY665775 ID=EY665775; Name=EY665775; organism=Citrus sinensis; type=EST; length=878bp
ATTTCTCTCTCAGAGTTAGTTCTCACTTCTCAGCATTATAAAAGGCGTAG
TATTTTGCAAAGATGGCGACTGGAACCCTGCCCGCTTCGTTTCCGGGCCT
CAAGAGCAGAGACCCGGGCTTGGGGTTTGCGAAAAGTGTGGATTTTGTGA
GAGTTTGTGATTTCAGAAAGTTCAAGTCTGGCAGAAGAAGATTCACTGTG
ATAAGGAATTCATCAAATTCCAGTTCGGATATCGCTGAGCTTCAGCCTGT
ATCAGAAGGAAGCCCACTGTTAGTTCCCAGACAAAAGTATTGTGAATCCA
TTCACAAAACTGTCAGAAGGAAGACTCGGACGGTGATGGTGGGAAATGTA
GCCATTGGCAGTGAGCATCCTATTAGAGTTCAAACAATGACTACAAATGA
CACTAAGGATGTTGCTGGAACAGTGGAAGAGGTAATGAGAATAGCAGACC
AGGGAGCAGATCTTGTTCGGATCACAGTTCAAGGGAAGAGAGAGGCAGAT
GCATGTTTTGAGATAAAAAACTCACTTGTCCAGAAAAACTACAATATACC
TCTGGTGGCAGATATTCATTTTGCCCCTTCTGTTGCTCTACGAGTTGCTG
AATGCTTTGACAAAATCCGTGTCAACCCAGGAAATTTTGCTGATAGACGG
GCTCAGTTTGAGCAGCTAGAGGACCCAGACGATGAGTATCAGAAAGAACT
TCAGCATATTGAGGAGGGTTTTATTCCATTGGGTGAGAATTGTAAAAAGT
ACGGAAGGGCCTGGCGTATTGGGCTAACCCTGGGGAACCCTTTCGAATTG
TTACATGAGCTACTTTAGGGATCCCTCCCAAGGGGATGCGTTTAATCTGC
CTTTTCGCTTTTTGAAAGAATCTTCGCG
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