CN186495
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186495 vs. ExPASy Swiss-Prot
Match: RS5_CAEEL (40S ribosomal protein S5 OS=Caenorhabditis elegans GN=rps-5 PE=1 SV=1) HSP 1 Score: 240.35 bits (612), Expect = 7.159e-63 Identity = 118/164 (71.95%), Postives = 141/164 (85.98%), Query Frame = 1 Query: 202 PSQPQYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAEC 693 P+ +V LF +W+ + V V+DISL DYI V+ K+A Y+PH+AGR+ V+RFRKA CPIVERL NSLMMHGRNNGKKLM VRIVKHA EII+LLT +NP+QV+V+AVINSGPRED+TRIG AG VRRQAVD++PLRRVNQAI+LL TGARE+AFRN+KTIAEC Sbjct: 16 PATEAPEVALFGKWSLQSVNVSDISLVDYIPVKE-KSAKYLPHSAGRFQVRRFRKAACPIVERLANSLMMHGRNNGKKLMTVRIVKHAFEIIYLLTGENPVQVLVNAVINSGPREDSTRIGRAGTVRRQAVDVAPLRRVNQAIWLLCTGAREAAFRNVKTIAEC 178
BLAST of CN186495 vs. ExPASy Swiss-Prot
Match: RS5B_DROME (40S ribosomal protein S5b OS=Drosophila melanogaster GN=RpS5b PE=2 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.595e-62 Identity = 114/158 (72.15%), Postives = 138/158 (87.34%), Query Frame = 1 Query: 220 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAEC 693 ++KLF RW +D+ ++DISL DYI V+ K A Y+PH+AGRY+ KRFRKAQCPIVERLT+ LMM GR+NGKKL+A RIVKHA EIIHLLT +NP+QV V+A++NSGPRED+TRIG AG VRRQAVD+SPLRRVNQAI+L+ TGARE+AFRNIKT+AEC Sbjct: 42 EIKLFGRWACDDISISDISLQDYIAVKE-KFARYLPHSAGRYAAKRFRKAQCPIVERLTSGLMMKGRSNGKKLLACRIVKHAFEIIHLLTSENPLQVTVNAIVNSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLICTGAREAAFRNIKTVAEC 198
BLAST of CN186495 vs. ExPASy Swiss-Prot
Match: RS5_YEAST (40S ribosomal protein S5 OS=Saccharomyces cerevisiae GN=RPS5 PE=1 SV=3) HSP 1 Score: 236.498 bits (602), Expect = 1.034e-61 Identity = 114/165 (69.09%), Postives = 139/165 (84.24%), Query Frame = 1 Query: 196 QDPSQPQYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAE 690 ++ Q Q ++KLFN+W+FE+V+V D SL DY+ V + +V HTAGRY+ KRFRKAQCPI+ERLTNSLMM+GRNNGKKL AVRI+KH ++II++LTDQNPIQV+VDA+ N+GPRED TR+G G RRQAVD+SPLRRVNQAI LLT GARE+AFRNIKTIAE Sbjct: 31 EEVQQAQTEIKLFNKWSFEEVEVKDASLVDYVQV---RQPIFVAHTAGRYANKRFRKAQCPIIERLTNSLMMNGRNNGKKLKAVRIIKHTLDIINVLTDQNPIQVVVDAITNTGPREDTTRVGGGGAARRQAVDVSPLRRVNQAIALLTIGAREAAFRNIKTIAE 192
BLAST of CN186495 vs. ExPASy Swiss-Prot
Match: RS5_NICPL (40S ribosomal protein S5 (Fragment) OS=Nicotiana plumbaginifolia GN=RPS5 PE=2 SV=1) HSP 1 Score: 233.032 bits (593), Expect = 1.143e-60 Identity = 118/122 (96.72%), Postives = 119/122 (97.54%), Query Frame = 1 Query: 328 HTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAEC 693 HTAGRY KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTD NPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRV+QAIYLLTTGARESAFRNIKTIAEC Sbjct: 1 HTAGRYQAKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDLNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVSQAIYLLTTGARESAFRNIKTIAEC 122
BLAST of CN186495 vs. ExPASy Swiss-Prot
Match: RS5B_SCHPO (40S ribosomal protein S5-B OS=Schizosaccharomyces pombe GN=rps5b PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.065e-58 Identity = 113/157 (71.97%), Postives = 133/157 (84.71%), Query Frame = 1 Query: 223 VKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAEC 693 +KLFN++ FE V+V DISL DYI + N +PHTAGR+ KRFRKA+C IVERLTNSLMM+GRNNGKKL+A RIVKHA EII LLTDQNP+QV+VDAV GPRED+TRIGSAG VRRQAVD+SPLRRVNQA+ L+T GARE+AFRN+K+I+EC Sbjct: 18 IKLFNKFPFEGVEVKDISLVDYITIG---NGQPLPHTAGRFQTKRFRKARCFIVERLTNSLMMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAVAACGPREDSTRIGSAGTVRRQAVDVSPLRRVNQALALITIGAREAAFRNVKSISEC 171
BLAST of CN186495 vs. ExPASy Swiss-Prot
Match: RS5A_SCHPO (40S ribosomal protein S5-A OS=Schizosaccharomyces pombe GN=rps5a PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 4.065e-58 Identity = 113/157 (71.97%), Postives = 133/157 (84.71%), Query Frame = 1 Query: 223 VKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAEC 693 +KLFN++ FE V+V DISL DYI + N +PHTAGR+ KRFRKA+C IVERLTNSLMM+GRNNGKKL+A RIVKHA EII LLTDQNP+QV+VDAV GPRED+TRIGSAG VRRQAVD+SPLRRVNQA+ L+T GARE+AFRN+K+I+EC Sbjct: 18 IKLFNKFPFEGVEVKDISLVDYITIG---NGQPLPHTAGRFQTKRFRKARCFIVERLTNSLMMNGRNNGKKLLATRIVKHAFEIIALLTDQNPLQVLVDAVAACGPREDSTRIGSAGTVRRQAVDVSPLRRVNQALALITIGAREAAFRNVKSISEC 171
BLAST of CN186495 vs. ExPASy Swiss-Prot
Match: RS5_DICDI (40S ribosomal protein S5 OS=Dictyostelium discoideum GN=rps5 PE=3 SV=1) HSP 1 Score: 218.009 bits (554), Expect = 3.805e-56 Identity = 106/158 (67.09%), Postives = 130/158 (82.28%), Query Frame = 1 Query: 220 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAEC 693 +V LF +W++ V DISL DYI V K + PH+AGRY+ RFRKAQCPIVERL NS+MM GRN GKK+MAVRI++ A EII+LLTD+NP+QV+V+AV+NSGPRED+TRIGSAG VRRQAVD+SP+RRVN A+YLLT G R +AFRNI+T+AEC Sbjct: 4 EVALFGKWSYSGVTCPDISLQDYICV---KKNVFTPHSAGRYNKVRFRKAQCPIVERLANSMMMFGRNAGKKVMAVRIIEQAFEIIYLLTDKNPLQVLVEAVMNSGPREDSTRIGSAGTVRRQAVDVSPMRRVNHAVYLLTQGTRAAAFRNIRTVAEC 158
BLAST of CN186495 vs. ExPASy Swiss-Prot
Match: RS5_ENTHI (40S ribosomal protein S5 (Fragment) OS=Entamoeba histolytica PE=2 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.209e-39 Identity = 74/115 (64.35%), Postives = 96/115 (83.48%), Query Frame = 1 Query: 349 VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAEC 693 +K FRK QCPIVERL +M HG+N+GKKL+A+R+V+ + EIIHLLT++NPIQV+VDA+IN+ PRED+TR+G+ G VR QAVD+SPLRR+N A+YLL G R AFRN K++AEC Sbjct: 2 IKPFRKIQCPIVERLVCCMMQHGKNSGKKLLAMRVVEESFEIIHLLTEKNPIQVLVDAIINASPREDSTRVGTGGNVRGQAVDVSPLRRINHALYLLIMGCRCGAFRNSKSLAEC 116
BLAST of CN186495 vs. ExPASy Swiss-Prot
Match: RS7_AERPE (30S ribosomal protein S7P OS=Aeropyrum pernix GN=rps7p PE=3 SV=3) HSP 1 Score: 152.14 bits (383), Expect = 2.564e-36 Identity = 77/157 (49.04%), Postives = 105/157 (66.88%), Query Frame = 1 Query: 223 VKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAEC 693 ++LF +W++ V+V D SL YI ++ ++PHT GR+ +RF KA+ PIVERL N LM GRN GKK +A IVK A +II+ T +NPIQV+V A+ NS PRED T+I G+ R +VD++P RRV+QA+ + GAR+ AF N K I EC Sbjct: 21 IRLFGKWSWVGVEVRDPSLKRYINLKPV----WLPHTGGRHEKRRFGKAEVPIVERLMNKLMRPGRNGGKKHLAYNIVKTAFDIIYFETGENPIQVLVKAIENSAPREDTTKITYGGITYRVSVDVAPQRRVDQALKFIADGARQCAFNNPKPIEEC 173
BLAST of CN186495 vs. ExPASy Swiss-Prot
Match: RS5_ENCCU (40S ribosomal protein S5 OS=Encephalitozoon cuniculi GN=RPS5 PE=1 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 3.702e-35 Identity = 75/157 (47.77%), Postives = 108/157 (68.79%), Query Frame = 1 Query: 220 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAE 690 ++ LF ++++E+V+VN++SL YI + VPH A + KA+ PI ER SLM HGRN+GKK +A+ I + A IIH +T +NP+QV+VDA++NSGPRED RIG AG +RR +VD+SPL+R++ AI L+ G R ++FRN T+AE Sbjct: 22 EINLFEKYSYEEVKVNNVSLRPYINLS---RRGIVPHAATTITKGTTGKARIPIAERFVCSLMRHGRNSGKKRLAINIFEDACFIIHSMTKKNPLQVLVDAIVNSGPREDTARIGRAGSMRRTSVDVSPLKRISIAISNLSAGIRNASFRNRITLAE 175 The following BLAST results are available for this feature:
BLAST of CN186495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186495 ID=CN186495; Name=CN186495; organism=Citrus sinensis; type=EST; length=694bpback to top |