CN186495
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186495 vs. ExPASy Swiss-Prot
Match: RS7_METKA (30S ribosomal protein S7P OS=Methanopyrus kandleri GN=rps7p PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.835e-35 Identity = 77/159 (48.43%), Postives = 106/159 (66.67%), Query Frame = 1 Query: 217 YDVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAEC 693 Y++K+F +W +V+V D L DYI ++ Y+PHT GR++ KRF KA+ PIVERL N +M +N GKK +A IVK A +IIH T +NPIQV+V A+ N+ PRE+ T I G+ +AVD SP RR++ A+ L+T GA++ AFRN K I EC Sbjct: 11 YEMKVFGKWDPTEVEVRDPGLKDYICLKPM----YLPHTGGRHAKKRFAKAEVPIVERLINRVMRTEKNTGKKHLAYNIVKRAFDIIHERTGENPIQVLVQALENAAPREETTTIIYGGISYHEAVDSSPQRRLDIALRLITEGAQQRAFRNPKPIEEC 165
BLAST of CN186495 vs. ExPASy Swiss-Prot
Match: RS7_SULTO (30S ribosomal protein S7P OS=Sulfolobus tokodaii GN=rps7p PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.077e-34 Identity = 79/157 (50.32%), Postives = 106/157 (67.52%), Query Frame = 1 Query: 220 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAE 690 D+K+F +W + V++ D SL YIG+ Y+PHT GR+ +RF KA+ PIVERL N++M GRN GKK++A IVK A +II L T QNPIQV+V A+ NS PRE+ TRI G+V AVD++P RRV+ A+ L GA+E++F N K I E Sbjct: 10 DLKVFGKWDTK-VEIRDPSLKKYIGLMPV----YLPHTGGRHEHRRFGKAKLPIVERLINNVMRPGRNKGKKMLAYNIVKTAFDIIALKTGQNPIQVLVKAIENSAPREEVTRIMYGGIVYYVAVDVAPQRRVDLALRHLVMGAKEASFNNPKPIEE 161
BLAST of CN186495 vs. ExPASy Swiss-Prot
Match: RS7_SULSO (30S ribosomal protein S7P OS=Sulfolobus solfataricus GN=rps7p PE=3 SV=3) HSP 1 Score: 146.747 bits (369), Expect = 1.077e-34 Identity = 78/159 (49.06%), Postives = 106/159 (66.67%), Query Frame = 1 Query: 214 QYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAE 690 Q D+K+F +W + V++ D SL YI + Y+PHT GR+ +RF KA+ PIVERL N +M GRN GKK +A IVK A +II+L T QNPIQV+V A+ NS PRE+ TRI G+V AVD+SP RR++ A+ + TGA++++F N K I E Sbjct: 7 QLDIKVFGKWDTK-VEIRDPSLKKYISLMPV----YLPHTGGRHEHRRFGKAKVPIVERLINQIMRPGRNKGKKHLAYNIVKLAFDIIYLKTGQNPIQVLVRAIENSAPREEVTRIMYGGIVYYVAVDVSPQRRIDLALRHIATGAKDASFNNPKPIEE 160
BLAST of CN186495 vs. ExPASy Swiss-Prot
Match: RS7_PYRIL (30S ribosomal protein S7P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rps7p PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.837e-34 Identity = 79/157 (50.32%), Postives = 100/157 (63.69%), Query Frame = 1 Query: 223 VKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAEC 693 V LF +W+FE+V V D L YI ++ +PHT GRY RF KA+ PIVERL N +M GRN GKK A IVK A +II+ T QNPIQV+VDA+IN PRE+ TRI G+ +VD+SP RR++ A+ +T GAR +F N K I EC Sbjct: 40 VLLFGKWSFENVVVKDPGLRRYICLKPV----LLPHTEGRYQKHRFGKARIPIVERLINLMMRPGRNTGKKHKAYNIVKRAFDIIYYKTGQNPIQVLVDAIINVAPREEVTRIIMGGIAYTVSVDVSPQRRLDLALRWITEGARTCSFNNPKPIEEC 192
BLAST of CN186495 vs. ExPASy Swiss-Prot
Match: RS7_METJA (30S ribosomal protein S7P OS=Methanocaldococcus jannaschii GN=rps7p PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.837e-34 Identity = 77/157 (49.04%), Postives = 105/157 (66.88%), Query Frame = 1 Query: 220 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAE 690 ++K+F RW+ +DV V D L +YI + YVPHTAGRY+ ++F KA+ IVERL N +M N GKKL A++IV++A EII T QNPIQV+VDA+ N+GPRED TRI G+V Q+VD S LRR++ A+ + GA +A ++ K I E Sbjct: 5 EIKVFGRWSTKDVVVKDPGLRNYINL----TPIYVPHTAGRYTKRQFEKAKMNIVERLVNKVMRREENTGKKLKALKIVENAFEIIEKRTKQNPIQVLVDAIENAGPREDTTRISYGGIVYLQSVDCSSLRRIDVALRNIALGAYMAAHKSKKPIEE 157
BLAST of CN186495 vs. ExPASy Swiss-Prot
Match: RS7_DESK1 (30S ribosomal protein S7P OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rps7p PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.134e-34 Identity = 75/157 (47.77%), Postives = 107/157 (68.15%), Query Frame = 1 Query: 220 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAE 690 ++KLFN+W+++ ++V D SL YI ++ Y+PH+ GR+ KRF KA PIVERL N++M GRN GKK +A IVK + E+I+L T +NP+QV+V A+ N+ PRE+ TRI G+ +VDI+PLRR++ A+ LT GAR AF N +I E Sbjct: 13 EIKLFNKWSYDFIEVRDPSLKKYICLKPV----YLPHSGGRHEHKRFGKALVPIVERLINNVMRPGRNMGKKHLAYNIVKKSFELIYLKTGENPLQVLVRAIENAAPREETTRIMYGGITYHVSVDIAPLRRIDLALRHLTEGARLKAFHNPISIEE 165
BLAST of CN186495 vs. ExPASy Swiss-Prot
Match: RS7_DESMO (30S ribosomal protein S7P OS=Desulfurococcus mobilis GN=rps7p PE=3 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 4.093e-34 Identity = 74/157 (47.13%), Postives = 104/157 (66.24%), Query Frame = 1 Query: 220 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAE 690 ++KLFN+W+++ ++V D SL YI ++ Y+PHT GR+ +RF K PIVERL N +M GRN GKK +A IVK A +IIH+ T +NPIQV+V A+ N+ PRE+ TRI G+ +VD++PLRR++ A+ LT GAR AF + I E Sbjct: 13 EIKLFNKWSYDFIEVRDPSLKKYICLKPV----YLPHTGGRHEHRRFGKTHVPIVERLINKVMRPGRNMGKKHLAYHIVKKAFDIIHIKTGENPIQVLVRAIENAAPREETTRIMYGGITYHVSVDVAPLRRIDLALRHLTEGARMKAFHSPIPIEE 165
BLAST of CN186495 vs. ExPASy Swiss-Prot
Match: RS7_THENV (30S ribosomal protein S7P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rps7p PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.032e-33 Identity = 75/155 (48.39%), Postives = 99/155 (63.87%), Query Frame = 1 Query: 229 LFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAEC 693 LF +W+FE+V V D L YI ++ +PHT GRY RF KA+ PIVERL N +M GRN GKK A IVK A +I++ T QNPIQV +DA++N+ PRE+ TRI G+ +VD+SP RR++ A+ +T GAR +F N K I EC Sbjct: 42 LFGKWSFENVVVRDPGLRRYICLKPV----VLPHTEGRYQNYRFGKARIPIVERLINLMMRPGRNAGKKHKAYNIVKRAFDIVYYKTGQNPIQVFIDAIVNTAPREEITRIIMGGIAYSVSVDVSPQRRLDLALRWITEGARACSFNNPKPIEEC 192
BLAST of CN186495 vs. ExPASy Swiss-Prot
Match: RS7_PYRAE (30S ribosomal protein S7P OS=Pyrobaculum aerophilum GN=rps7p PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.032e-33 Identity = 74/157 (47.13%), Postives = 100/157 (63.69%), Query Frame = 1 Query: 223 VKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAEC 693 + LF +W++EDV V D L YI ++ +PHT GRY RF KA+ PIVERL N +M GRN GKK A IVK A ++I+ T +NP+QV +DA+IN+ PRE+ TRI G+ +VD+SP RR++ A+ +T GAR +F N K I EC Sbjct: 39 ILLFGKWSYEDVVVRDPGLRRYICLKPV----ILPHTEGRYQNTRFGKARIPIVERLINLMMRPGRNTGKKHKAYNIVKRAFDLIYYKTGKNPLQVFIDAIINTAPREEITRIIMGGIAYSVSVDVSPQRRLDLALRWITEGARACSFNNPKPIEEC 191
BLAST of CN186495 vs. ExPASy Swiss-Prot
Match: RS7_METMP (30S ribosomal protein S7P OS=Methanococcus maripaludis GN=rps7p PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.032e-33 Identity = 77/158 (48.73%), Postives = 100/158 (63.29%), Query Frame = 1 Query: 220 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAEC 693 ++KLF +W E V V D SL YI V VPHTAGR S K F K++ IVERL N LM + N GKK + IV+ A+ II T +NP+QV+VDA+ NSGPRE+ TRI G+ Q+VD+SP RR++ A + GA ESA +N KT+A+C Sbjct: 2 EIKLFGKWDSETVAVKDPSLKSYISVAPV----LVPHTAGRNSKKSFDKSKMNIVERLANKLMANQNNTGKKHETLAIVEEALTIIENRTKENPVQVLVDALENSGPREETTRISYGGIAFLQSVDVSPSRRLDTAFRNIALGASESAHKNKKTVAQC 155 The following BLAST results are available for this feature:
BLAST of CN186495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186495 ID=CN186495; Name=CN186495; organism=Citrus sinensis; type=EST; length=694bpback to top |