CN186495
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186495 vs. ExPASy Swiss-Prot
Match: RS7_PYRHO (30S ribosomal protein S7P OS=Pyrococcus horikoshii GN=rps7p PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.659e-25 Identity = 68/174 (39.08%), Postives = 96/174 (55.17%), Query Frame = 1 Query: 217 YDVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRN----------------NGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAE 690 +++K+ RW+ EDV+V D SL YI ++ +PHT GR++ K F KA IVERL N +M G + N KK+ A +VK A +II T +NPIQV+V A+ N+ PRED T + G+ AVDISPLRR++ A+ + GA +R + AE Sbjct: 16 HEIKVMGRWSTEDVEVKDPSLKPYINLEPR----LLPHTHGRHAKKHFGKANVHIVERLINKVMRSGGSHYKVAGHFMRREHRSLNSKKVRAYEVVKEAFKIIEKRTGKNPIQVLVWAIENAAPREDTTSVMFGGIRYHVAVDISPLRRLDVALRNIALGASAKCYRTKMSFAE 185
BLAST of CN186495 vs. ExPASy Swiss-Prot
Match: RS7_PYRAB (30S ribosomal protein S7P OS=Pyrococcus abyssi GN=rps7p PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.473e-25 Identity = 67/174 (38.51%), Postives = 96/174 (55.17%), Query Frame = 1 Query: 217 YDVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRN----------------NGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAE 690 +++K+ RW+ EDV+V D SL YI ++ +PHT GR++ K F KA IVERL N +M G + N KK+ A +VK A +II T +NPIQV+V A+ N+ PRED T + G+ AVDISP+RR++ A+ + GA +R + AE Sbjct: 13 HEIKVMGRWSTEDVEVRDPSLKPYINLEPR----LLPHTHGRHAKKHFGKANVHIVERLINKIMRSGGSHYKVAGHFMRREHRSLNSKKVKAYEVVKEAFKIIEKRTGKNPIQVLVWAIENAAPREDTTSVMFGGIRYHVAVDISPMRRLDVALRNIALGASAKCYRTKMSFAE 182
BLAST of CN186495 vs. ExPASy Swiss-Prot
Match: RS7_HALWD (30S ribosomal protein S7P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rps7p PE=3 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 7.738e-25 Identity = 58/164 (35.37%), Postives = 93/164 (56.71%), Query Frame = 1 Query: 199 DPSQPQYDVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAE 690 D + KLF W +++ D S YI V T + HT GR++ K+F K++ +VERL N LM N G K + IV+ A + IH T++NP+QV+V V N+ PRE+ R+ G+ QAVD++P RRV+QA+ + G + ++++ ++ A+ Sbjct: 37 DTDTASANAKLFGEWDVSEIEYEDPSTQRYITV------TPIAHTMGRHAAKQFEKSKISVVERLINRLMQTEDNTGHKQKTMNIVEDAFDTIHNRTEENPVQVLVRGVENAAPREETVRLKYGGISVPQAVDVAPQRRVDQALKFIADGTQRGSYKSAQSAAD 194
BLAST of CN186495 vs. ExPASy Swiss-Prot
Match: RS7_METLZ (30S ribosomal protein S7P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rps7p PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.724e-24 Identity = 56/136 (41.18%), Postives = 86/136 (63.24%), Query Frame = 1 Query: 223 VKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI 630 + LFN+W +V V D + Y+ + +T VP + GR + ++F K++ IVERL N LM N GKK+M ++V A ++I+ T QNP+QV+VDAV N+GPRE+ R+ G+ ++VD +P+RRVN A+ Sbjct: 10 ILLFNKWDMSEVVVKDAGMVRYVTI----TSTEVPSSCGRLTQQQFTKSEMAIVERLINRLMQQEYNTGKKMMCTKMVMDAFDVINKKTKQNPLQVLVDAVANAGPREETVRLKYGGINVPKSVDSAPIRRVNTAL 141
BLAST of CN186495 vs. ExPASy Swiss-Prot
Match: RS7_PICTO (30S ribosomal protein S7P OS=Picrophilus torridus GN=rps7p PE=3 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.906e-23 Identity = 57/158 (36.08%), Postives = 92/158 (58.23%), Query Frame = 1 Query: 220 DVKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAEC 693 D + ++ +Q++D+ L+ YI + N+ + HT GRYS K +ERL N LM + GKK A R++K A EI+ T QNP+QV+++A+ NS PRE+ TR+ G+ ++VD+SP RR+++A+ + GA +F++ I EC Sbjct: 2 DRLIMGKYDVSGIQIHDMGLAKYINL----NSYFNLHTGGRYSNYSAGKRNVNTIERLLNKLMRTEKWTGKKYSAYRVLKEAFEIVEQKTKQNPVQVLINAIENSAPREEVTRLKYGGIAVPKSVDVSPSRRLDEALRNICIGATSKSFKSKVPIEEC 155
BLAST of CN186495 vs. ExPASy Swiss-Prot
Match: RS7_NANEQ (30S ribosomal protein S7P OS=Nanoarchaeum equitans GN=rps7p PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.107e-22 Identity = 63/154 (40.91%), Postives = 83/154 (53.90%), Query Frame = 1 Query: 223 VKLFNRWTFEDVQVNDISLSDYIGVQAAKNATYVPHTAGRYSVKRFRKAQCPIVERLTNSLMMHGR-----------NNGKKLMAVRIVKHAMEIIHLLTDQNPIQVIVDAVINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGA 651 +KLF RW +EDV V D L DYI ++ +P++ GR+ RF KA+ PI+ERL LM G GKK A +I+ EII T QNP++V V A+ N+ PRE+ T I G +AVD SP RRV+ AI + GA Sbjct: 3 MKLFGRWDYEDVTVEDPGLRDYINLKPM----LIPYSGGRHQKHRFGKAKIPIIERLAGRLMTSGHLGKKHKWTSEHQTGKKYNAYKIIIRTFEIIEKRTKQNPLKVFVKAIENAAPREETTTIEYGGARYPKAVDCSPQRRVDLAIRHMVWGA 152 The following BLAST results are available for this feature:
BLAST of CN186495 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186495 ID=CN186495; Name=CN186495; organism=Citrus sinensis; type=EST; length=694bpback to top |