CX675019

Overview
NameCX675019
Unique NameCX675019
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length812
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4331 contig Csv1_Contig4331:16..827. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675019 vs. ExPASy Swiss-Prot
Match: PYGB_PONAB (Glycogen phosphorylase, brain form OS=Pongo abelii GN=PYGB PE=2 SV=3)

HSP 1 Score: 166.777 bits (421), Expect = 1.310e-40
Identity = 90/197 (45.69%), Postives = 124/197 (62.94%), Query Frame = -2
Query:  221 GDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL 811
            GD LKVIF+ +Y VS+AE +IPA++LSQ ISTAG EASGT NMKF +NG + IGT+DGANVE+ +E G EN F+FG +  ++  L ++    +   D    E+K+ V     G ++  E     +        D F V  D+ +Y++CQ +VD+ Y + K WT+  I N A S KFSSDRTI EYAR+IW + P +L
Sbjct:  638 GDRLKVIFLENYRVSLAEKVIPAADLSQQISTAGAEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGAENLFIFGLQVEDVEALDRKGYNAREYYD-HLPELKQAVDQISSGFFSPKEPNCFKDIVNMLMHHDRFKVFADYEAYMQCQAQVDQLYRNPKEWTKKVIRNIACSGKFSSDRTITEYAREIWGVEPSDL 833          
BLAST of CX675019 vs. ExPASy Swiss-Prot
Match: PYGB_RAT (Glycogen phosphorylase, brain form (Fragment) OS=Rattus norvegicus GN=Pygb PE=1 SV=3)

HSP 1 Score: 166.007 bits (419), Expect = 2.235e-40
Identity = 94/204 (46.08%), Postives = 131/204 (64.22%), Query Frame = -2
Query:  221 GDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGL-RKERSEGKF---VPDARFEEVKKFVKSGVFGSYNYD---ELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL 811
            GD L+VIF+ +Y VS+AE +IPA++LSQ ISTAG EASGT NMKF +NG + IGT+DGANVE+ +E GEEN F+FG R  ++  L +K  +  +F   +P+ R  +    + SG F   + D   +++  L  +      D F V  D+ +Y++CQ +VD  Y + K WT+  I N A S KFSSDRTI EYAR+IW + P +L
Sbjct:  638 GDRLRVIFLENYRVSLAEKVIPAADLSQQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENLFIFGMRVEDVEALDQKGYNAQEFYERLPELR--QAVDQISSGFFSPKDPDCFKDVVNMLMYH------DRFKVFADYEAYIQCQAQVDHLYRNPKDWTKKVIRNIACSGKFSSDRTITEYAREIWGVEPSDL 833          
BLAST of CX675019 vs. ExPASy Swiss-Prot
Match: PHSG_PASMU (Glycogen phosphorylase OS=Pasteurella multocida GN=glgP PE=3 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.812e-40
Identity = 90/198 (45.45%), Postives = 124/198 (62.63%), Query Frame = -2
Query:  224 LKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKE--RSEGKFVPDARFEEVKKFVKSGVFG---SYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVE 802
            LKV+F+P+Y+VS+AEL+IPA+++S+ IS AG EASGTSNMKFA+NG + IGTLDGANVEI   VG+++ F+FG    ++  LR+   R    +  D    +V   + SG F    +  Y +L+ SL+ +      DY+    DF SY++ Q+ VD  Y DQ  W   ++ N    S FSSDRTI EYA  IW I PV+
Sbjct:  627 LKVVFIPNYSVSLAELIIPAADISEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEILDNVGQDHIFIFGNTVEQVESLRRHGYRPFDYYQNDEELRKVVDQIISGRFSPTDANRYHQLLQSLQYH------DYYQAFADFRSYVDMQQNVDAKYQDQNAWIDSTLQNIVNMSYFSSDRTILEYAEKIWKIKPVK 818          
BLAST of CX675019 vs. ExPASy Swiss-Prot
Match: PHSG_CHLPN (Glycogen phosphorylase OS=Chlamydia pneumoniae GN=glgP PE=3 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 4.979e-40
Identity = 85/192 (44.27%), Postives = 123/192 (64.06%), Query Frame = -2
Query:  236 DLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFV-PDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 808
            D LKV+F+P+Y VS+AE +IP ++LS+ ISTAGMEASGT NMKFA+NG + IGT+DGAN+E+ + +G+EN F+FG    +I  LR+E         + +  +V   ++ G F S + D     +  +    + D F V  D  SY+   E V++ + +   WT++SI NTAG   FSSDR IQ+YARDIW++
Sbjct:  625 DKLKVLFLPNYRVSMAEHIIPGTDLSEQISTAGMEASGTGNMKFALNGALTIGTMDGANIEMAEHIGKENMFIFGLLEEQIVQLRREYCPQTICDKNPKIRQVLDLLEQGFFNSNDKDLFKPIV--HRLLHEGDPFFVLADLESYIAAHENVNKLFKEPDSWTKISIYNTAGMGFFSSDRAIQDYARDIWHV 814          
BLAST of CX675019 vs. ExPASy Swiss-Prot
Match: PYGB_SHEEP (Glycogen phosphorylase, brain form OS=Ovis aries GN=PYGB PE=2 SV=3)

HSP 1 Score: 163.696 bits (413), Expect = 1.109e-39
Identity = 93/202 (46.04%), Postives = 124/202 (61.39%), Query Frame = -2
Query:  221 GDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGL-RKERSEGKFVPD-ARFEEVKKFVKSGVFGSYNYD---ELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL 811
            GD LKVIF+ +Y VS+AE +IPA++LSQ ISTAG EASGT NMKF +NG + IGT+DGANVE+ +E G EN F+FG R  ++  L RK  +  ++       ++    + SG F     D   +++  L  +      D F V  D+ +Y+ CQ +VD+ Y + K WT+  I N A S KFSSDRTI EYARDIW   P  L
Sbjct:  638 GDRLKVIFLENYRVSLAEKVIPAADLSQQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGAENLFIFGLRVEDVEALDRKGYNAHEYYNHLPELQQAVDQINSGFFSPREPDCFKDVVNMLLNH------DRFKVFADYEAYVACQAQVDQLYRNPKEWTKKVIRNIACSGKFSSDRTITEYARDIWGAEPPAL 833          
BLAST of CX675019 vs. ExPASy Swiss-Prot
Match: PYGB_BOVIN (Glycogen phosphorylase, brain form OS=Bos taurus GN=PYGB PE=2 SV=3)

HSP 1 Score: 162.155 bits (409), Expect = 3.227e-39
Identity = 91/197 (46.19%), Postives = 120/197 (60.91%), Query Frame = -2
Query:  221 GDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL 811
            GD LKVIF+ +Y VS+AE +IPA++LSQ ISTAG EASGT NMKF +NG + IGT+DGANVE+ +E G EN F+FG R  ++  L ++        D R  E+++ V     G ++  E     +        D F V  D+ +Y+ CQ +VD+ Y + K WT+  I N A S KFSSDRTI EYA DIW   P  L
Sbjct:  638 GDRLKVIFLENYRVSLAEKVIPAADLSQQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGAENLFIFGLRVEDVEALDRKGYNAHEYYD-RLPELRQAVDQINGGFFSPREPDCFKDVVNMLLNHDRFKVFADYEAYVACQARVDQLYRNPKEWTKKVIRNIACSGKFSSDRTITEYAHDIWGAEPPAL 833          
BLAST of CX675019 vs. ExPASy Swiss-Prot
Match: PYG_DROME (Glycogen phosphorylase OS=Drosophila melanogaster GN=GlyP PE=2 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 5.505e-39
Identity = 84/196 (42.86%), Postives = 126/196 (64.29%), Query Frame = -2
Query:  230 GDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKE--RSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 811
            GD LKVIF+ +Y V++AE ++PA++LS+ ISTAG EASGT NMKF +NG + IGTLDGANVE+ +E+G +N F+FG    E+  L+K+   +   +  +   ++V   ++ G F   N +E        +   + D++ +  D+ +Y++ Q+ V + Y +Q +W  MSI N A S KFSSDRTI EYAR+IW + P
Sbjct:  638 GDKLKVIFLENYRVTLAEKIMPAADLSEQISTAGTEASGTGNMKFQLNGALTIGTLDGANVEMAEEMGLDNIFIFGMTVDEVEALKKKGYNAYDYYNANPEVKQVIDQIQGGFFSPGNPNEFKNIA---DILLKYDHYYLLADYDAYIKAQDLVSKTYQNQAKWLEMSINNIASSGKFSSDRTIAEYAREIWGVEP 830          
BLAST of CX675019 vs. ExPASy Swiss-Prot
Match: PHSG_CHLTR (Glycogen phosphorylase OS=Chlamydia trachomatis GN=glgP PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.568e-38
Identity = 84/192 (43.75%), Postives = 118/192 (61.46%), Query Frame = -2
Query:  236 DLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKE-RSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 808
            D LKVIF P+Y VS+AE +IPA++LS+ ISTAGMEASGT NMKFA+NG + IGT+DGAN+E+ + +G+E+ F+FG    EI+ LRKE   +G    +   +E+   +    F   + D     +  N    + D F V  D  +Y+  Q +V   +   + WT+ SI N  G   FSSDR+I EYA +IWN+
Sbjct:  620 DQLKVIFWPNYRVSLAEAIIPATDLSEQISTAGMEASGTGNMKFALNGALTIGTMDGANIEMAEHIGKEHMFIFGLLEEEISELRKEYYPQGICNANPTIQEILDMIAQAKFSQEDKDLFKPIV--NRLLNEGDPFFVLADLEAYINTQNRVASLFKQPEEWTKKSIYNVGGIGFFSSDRSIAEYASNIWNV 809          
BLAST of CX675019 vs. ExPASy Swiss-Prot
Match: PHSG_CHLMU (Glycogen phosphorylase OS=Chlamydia muridarum GN=glgP PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.086e-38
Identity = 83/192 (43.23%), Postives = 118/192 (61.46%), Query Frame = -2
Query:  236 DLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKE-RSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 808
            DLLKV+F P+Y VS+AE +IPA++LS+ ISTAGMEASGT NMKFA+NG + IGT+DGAN+E+ + +G+E+ F+FG    EI+ LR E   +G    + + +E+   V        + D     +  N    + D F V  D  SYL+   +V   +   + WT+ SI N  G   FSSDR+I +YA +IWN+
Sbjct:  620 DLLKVVFWPNYRVSLAEAIIPATDLSEQISTAGMEASGTGNMKFALNGALTIGTMDGANIEMAEHIGKEHMFIFGLLEEEISALRNEYYPQGICNANPKIQEILDMVLQARLPEEDKDLFKPIV--NRLLNEGDPFFVLADLESYLDAHNRVARLFTQPEEWTKKSIYNVGGIGFFSSDRSITDYASNIWNV 809          
BLAST of CX675019 vs. ExPASy Swiss-Prot
Match: PHSG_BACSU (Glycogen phosphorylase OS=Bacillus subtilis GN=glgP PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 5.152e-37
Identity = 84/198 (42.42%), Postives = 123/198 (62.12%), Query Frame = -2
Query:  227 LLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKE---RSEGKFVPDARFEEVKKFVKSGVF--GSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPV 805
            L+KV+F+ +Y VS+AE + PAS++S+ ISTA  EASGT NMKF MNG + IGT DGAN+EI + VG +  + FG +A E+   ++    RS   +  D R  +V   + +G F   +  ++ +  SL         D + V KDF SY + QE++   Y ++++W+  SI+N A S  FSSDRTI+EYA+DIW I P+
Sbjct:  605 LIKVVFLENYRVSMAERIFPASDVSEQISTASKEASGTGNMKFMMNGALTIGTHDGANIEILERVGPDCIYTFGLKADEVLSYQENGGYRSREYYQHDRRIRQVADQLINGFFEGEADEFESIFDSL-----LPHNDEYFVLKDFSSYADAQERIQADYRERRKWSEHSIVNIAHSGYFSSDRTIREYAKDIWGIKPM 797          
The following BLAST results are available for this feature:
BLAST of CX675019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
PYGB_PONAB1.310e-4045.69Glycogen phosphorylase, brain form OS=Pongo abelii... [more]
PYGB_RAT2.235e-4046.08Glycogen phosphorylase, brain form (Fragment) OS=R... [more]
PHSG_PASMU3.812e-4045.45Glycogen phosphorylase OS=Pasteurella multocida GN... [more]
PHSG_CHLPN4.979e-4044.27Glycogen phosphorylase OS=Chlamydia pneumoniae GN=... [more]
PYGB_SHEEP1.109e-3946.04Glycogen phosphorylase, brain form OS=Ovis aries G... [more]
PYGB_BOVIN3.227e-3946.19Glycogen phosphorylase, brain form OS=Bos taurus G... [more]
PYG_DROME5.505e-3942.86Glycogen phosphorylase OS=Drosophila melanogaster ... [more]
PHSG_CHLTR3.568e-3843.75Glycogen phosphorylase OS=Chlamydia trachomatis GN... [more]
PHSG_CHLMU6.086e-3843.23Glycogen phosphorylase OS=Chlamydia muridarum GN=g... [more]
PHSG_BACSU5.152e-3742.42Glycogen phosphorylase OS=Bacillus subtilis GN=glg... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_59B08_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-59B08-C15-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675019 ID=CX675019; Name=CX675019; organism=Citrus sinensis; type=EST; length=812bp
TTTTTTGAAACAAGATTTTCAGTTCTTATTTATTTTATTCTATTAACTAC
GTAATACAGTAATTATATTCATCGAAGATACATTTATTCACGGCTTTCAT
CCAGGGATCATAAGCATTTTGCTTTACATAGAACATATATCAACAGGATG
CCATAAGTGATCAGAAAAGCCTGTGGTAGTCCCAACTCAAGTACTAGGAA
CAAGCATTACACAGTCACGGCAATTCGACGGGTATTATGTTCCATATGTC
TCGGGCATATTCCTGAATCGTTCTGTCGCTGCTGAACTTGGATGAACCCG
CTGTGTTCATGATCGACATTCTCGTCCATCTCTTTTGATCGCAATATGCT
TCATCAACCTTCTCTTGGCATTCCAAGTAACTAGGGAAATCTTTGCCCAC
GAGGAAATAATCTGCCTGGCCAAAACCTTCATTTCCTTCCAGTGATCCCA
TTAGTTCATCATAGTTGTAAGAACCAAAAACACCAGATTTGACAAATTTC
TTCACTTCTTCAAAACGTGCGTCGGGAACAAATTTCCCCTCAGATCTTTC
TTTTCTCAATCCTGCAATCTCGTGGGCTCTGGCACCAAATAGGAAAAAGT
TCTCCTCTCCAACCTCTTGCCGTATTTCAACATTGGCACCATCCAAGGTT
CCAATCAAAATGCAACCATTCATTGCAAATTTCATGTTACTGGTACCACT
AGCCTCCATCCCGGCAGTACTGATGTGTTGTGAGAGCTCACTTGCAGGTA
TAAGCAATTCAGCCACACTTACATTGTAATCAGGGACAAAAATAACCTTC
AATAAGTCACCT
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