EY665772
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB4A_SOLLC (Chlorophyll a-b binding protein CP24 10A, chloroplastic OS=Solanum lycopersicum GN=CAP10A PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 8.174e-21 Identity = 73/210 (34.76%), Postives = 105/210 (50.00%), Query Frame = 3 Query: 123 SAAVFRPCASKSRFLTGSSGKLNREVALKPVSSSAS----------FKVEAKGEWLPG------LASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDAGK---AEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQD------PIFKQYSLPPNEVGYPGG-IFNPLNFA 674 SAAV +S FLTG G ++ + P+++ AK W+P L P +L+GSLPGD GFDPLGL +DP LKWY +AEL++ RWAM V+G+ + + ++ I W++AG A S TL + IL +VE +RW D +P S + + + ++ E GYPGG F+PL A Sbjct: 5 SAAVLNGLSSS--FLTG--GNKSQALLAAPLAARVGGAATPKRFTVLAAAAKKSWIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGI------PWFEAGADPGAIAPFSFGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTAENFANFTGEQGYPGGKFFDPLALA 204
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB4B_SOLLC (Chlorophyll a-b binding protein CP24 10B, chloroplastic OS=Solanum lycopersicum GN=CAP10B PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 9.037e-20 Identity = 72/212 (33.96%), Postives = 107/212 (50.47%), Query Frame = 3 Query: 108 VTTQASAAVFRPCASKSRFLTG---SSGKLNREVALKPVSSS----ASFKVEAKGEWLPGLAS------PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINVPQWYDAGK---AEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQD------PIFKQYSLPPNEVGYPGG-IFNPLNFA 674 +TT ++ AV +S FLTG + L V + + A+ V K W+P + S P +L+GSLPGD GFDPLGL +DP LKWY +AEL++ RWAM V+G+ + + ++ I W++AG A S +L + +L +VE +RW D + S + D + ++ E GYPGG F+PL A Sbjct: 1 MTTTSATAVLNGLSSS--FLTGGKKTQALLGAHVTARVTTPKRFVVAAAAVAPKKSWIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWSGI------PWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFDNDSQSIDWATPWSKTAENFANFTGEQGYPGGKFFDPLALA 204
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.607e-16 Identity = 56/184 (30.43%), Postives = 79/184 (42.93%), Query Frame = 3 Query: 174 SSGKLNREVALKPVSSSASFKVEAKGEWLPGL---ASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGK-------AEYFASSSTLFVIEFILFHYVE------IRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFA 674 ++GK A P SS F + +WL A+P YL G PGD G+D GL+ DPE K Y + EL+++RWAMLG +G PE+ K G W+ AG +Y + S + + V+ I ++ P DP+ YPG F+PL A Sbjct: 17 ATGKKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYRVNGGPAGEGLDPL------------YPGESFDPLGLA 188 HSP 2 Score: 26.9498 bits (58), Expect = 2.607e-16 Identity = 15/36 (41.67%), Postives = 20/36 (55.56%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 E K KE+ NG+LA + FG + A KG +NL Sbjct: 196 ELKVKEIKNGRLASFSMFGFFVQA-IVTGKGPVQNL 230
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.384e-16 Identity = 63/204 (30.88%), Postives = 98/204 (48.04%), Query Frame = 3 Query: 99 MATVTTQASAAVFRPCASK----SRFLTGSSGKLNREVALKPVSSSASFKVEAKGEWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPPNEVG---YPGGIFNPLNFA 674 MA T S+ F A K + +TG+ R+ KPV+SS+ + + ++L + SP+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ + G+ W+ AG ++ F+ ++ L H I W + G+V ++ P EV YPGG F+PL A Sbjct: 1 MAAATMALSSPSFAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG-SQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGAVEG---YRVAGGPLGEVVDPLYPGGSFDPLGLA 200 HSP 2 Score: 30.8018 bits (68), Expect = 3.384e-16 Identity = 17/36 (47.22%), Postives = 21/36 (58.33%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 E K KE+ NG+LAM + FG + A KG ENL Sbjct: 208 ELKVKEIKNGRLAMFSMFGFFVQA-IVTGKGPLENL 242
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.715e-16 Identity = 64/209 (30.62%), Postives = 99/209 (47.37%), Query Frame = 3 Query: 99 MATVTTQASAAVFRPCASK----SRFLTGSSGKLNREVALK--PVSSSASFKVEAKGEWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPPNEVG------YPGGIFNPLNFA 674 MAT T S++ F A K S +TG+ R+ A K P SS + + + ++L + SP+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ + G+ W+ AG ++ F+ ++ L H I W + G+V + Y + +G YPGG F+PL A Sbjct: 1 MATSTMALSSSTFAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG-SQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAV------EGYRIAGGPLGEVVDPLYPGGSFDPLGLA 202 HSP 2 Score: 30.8018 bits (68), Expect = 5.715e-16 Identity = 17/36 (47.22%), Postives = 21/36 (58.33%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 E K KE+ NG+LAM + FG + A KG ENL Sbjct: 210 ELKVKEIKNGRLAMFSMFGFFVQA-IVTGKGPLENL 244
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB23_NICPL (Chlorophyll a-b binding protein C, chloroplastic OS=Nicotiana plumbaginifolia GN=CABC PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.428e-16 Identity = 65/206 (31.55%), Postives = 99/206 (48.06%), Query Frame = 3 Query: 99 MATVTTQASAAVFRPCASK----SRFLTGSSGKLNREVA--LKPVSSSASFKVEAKGEWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPPNEVG---YPGGIFNPLNFA 674 MA T S++ F A K S +TG+ R+ A KPVSSS+ + + ++L + SP+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ + G+ W+ G ++ F+ ++ L H I W + G+V ++ P EV YPGG F+PL A Sbjct: 1 MAASTMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKGG-SQIFSQGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG---YRVAGEPLGEVVDPLYPGGSFDPLGLA 202 HSP 2 Score: 30.8018 bits (68), Expect = 7.428e-16 Identity = 17/36 (47.22%), Postives = 21/36 (58.33%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 E K KE+ NG+LAM + FG + A KG ENL Sbjct: 210 ELKVKEIKNGRLAMFSMFGFFVQA-IVTGKGPLENL 244
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.428e-16 Identity = 66/209 (31.58%), Postives = 102/209 (48.80%), Query Frame = 3 Query: 99 MATVTTQASAAVFRPCASKSRFLTGSSGKL--NREVAL-------KPVSSSASFKVEAKGEWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPPNEVG---YPGGIFNPLNFA 674 MA TT S+ P A K+ L+ SS ++ N +V + KPVSS + + + ++L + SP+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ + G+ W+ AG ++ F+ ++ L H I W + G+V ++ P EV YPGG F+PL A Sbjct: 1 MAASTTALSS----PFAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG-SQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG---YRVAGEPLGEVVDPLYPGGSFDPLGLA 201 HSP 2 Score: 31.187 bits (69), Expect = 7.428e-16 Identity = 17/36 (47.22%), Postives = 21/36 (58.33%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 E K KE+ NG+LAM + FG + A KG ENL Sbjct: 209 ELKVKEIKNGRLAMFSMFGFFVQA-LVTGKGPLENL 243
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB21_ORYSJ (Chlorophyll a-b binding protein 1, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB1R PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 9.658e-16 Identity = 63/214 (29.44%), Postives = 95/214 (44.39%), Query Frame = 3 Query: 99 MATVTTQASAAVF-RPCASKSRFLTGSSGKLNREVALKP---VSSSASFKVEAKGEWLPGLAS--PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGK-------AEYFASSS--------TLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFA 674 MA T S+ V R S S L G + R+ A KP SS + + + +L L+ P+YL G PGD G+D GL+ DPE + E+++SRWAMLG +G + PE+ + G+ W+ AG +Y + S ++ ++ +L VE ++ P DP+ YPGG F+PL A Sbjct: 1 MAAATMALSSPVMARAAPSTSSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVE--GYRIAGGPLGEVVDPL------------YPGGAFDPLGLA 200 HSP 2 Score: 30.8018 bits (68), Expect = 9.658e-16 Identity = 17/36 (47.22%), Postives = 21/36 (58.33%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 E K KE+ NG+LAM + FG + A KG ENL Sbjct: 208 ELKVKEIKNGRLAMFSMFGFFVQA-IVTGKGPLENL 242
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB23_PETSP (Chlorophyll a-b binding protein 22R, chloroplastic OS=Petunia sp. GN=CAB22R PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.255e-15 Identity = 65/206 (31.55%), Postives = 98/206 (47.57%), Query Frame = 3 Query: 99 MATVTTQASAAVFRPCA----SKSRFLTGSSGKLNREVALK--PVSSSASFKVEAKGEWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPPNEV---GYPGGIFNPLNFA 674 MA T S++ F A S S +TG+ R+ K P SSS+ + + ++L + +P+YL G P D G+D GL+ DPE + E+++ RWAMLG +G + PE+F + GI W+ AG A+ F+ ++ L H I W + G+V ++ P EV YPGG F+PL A Sbjct: 1 MAATTMALSSSSFAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGIKFGEAVWFKAG-AQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG---YRVAGGPLGEVIDPLYPGGSFDPLGLA 202 HSP 2 Score: 30.8018 bits (68), Expect = 1.255e-15 Identity = 17/36 (47.22%), Postives = 21/36 (58.33%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 E K KE+ NG+LAM + FG + A KG ENL Sbjct: 210 ELKVKEIKNGRLAMFSMFGFFVQA-IVTGKGPLENL 244
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.255e-15 Identity = 66/209 (31.58%), Postives = 102/209 (48.80%), Query Frame = 3 Query: 99 MATVTTQASAAVFRPCASKSRFLTGSSGKL--NREVAL-------KPVSSSASFKVEAKGEWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPPNEVG---YPGGIFNPLNFA 674 MA TT S+ P A K+ L+ SS ++ N +V + KPVSS + + + ++L + SP+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ + G+ W+ AG ++ F+ ++ L H I W + G+V ++ P EV YPGG F+PL A Sbjct: 1 MAASTTALSS----PFAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG-SQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG---YRVAGGPLGEVVDPLYPGGSFDPLGLA 201 HSP 2 Score: 30.8018 bits (68), Expect = 1.255e-15 Identity = 17/36 (47.22%), Postives = 21/36 (58.33%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 E K KE+ NG+LAM + FG + A KG ENL Sbjct: 209 ELKVKEIKNGRLAMFSMFGFFVQA-IVTGKGPLENL 243 The following BLAST results are available for this feature:
BLAST of EY665772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665772 ID=EY665772; Name=EY665772; organism=Citrus sinensis; type=EST; length=922bpback to top |