EY665772
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB2_PHYPA (Chlorophyll a-b binding protein, chloroplastic OS=Physcomitrella patens PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.043e-15 Identity = 49/140 (35.00%), Postives = 71/140 (50.71%), Query Frame = 3 Query: 273 SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPPNEVG---YPGGIFNPLNFA 674 +P+YLNG GD G+D GL+ DPE + E++++RWAMLG +G L PE+ K G+ W+ AG A+ F+ ++ L H I W + G+V ++ P EV YPGG F+PL A Sbjct: 68 TPSYLNGEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGALGCLTPELLAKSGVKFGEAVWFKAG-AQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG---YRVAGGPLGEVTDPIYPGGSFDPLGLA 203 HSP 2 Score: 30.8018 bits (68), Expect = 6.043e-15 Identity = 17/36 (47.22%), Postives = 21/36 (58.33%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 E K KE+ NG+LAM + FG + A KG ENL Sbjct: 211 ELKVKEIKNGRLAMFSMFGFFVQA-IVTGKGPLENL 245
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB21_LEMGI (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Lemna gibba PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.048e-15 Identity = 47/142 (33.10%), Postives = 70/142 (49.30%), Query Frame = 3 Query: 273 SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQDIKNPGSVNQDPIFKQYSLPPNEVG------YPGGIFNPLNFA 674 +P+YL G PGD G+D GL+ DPE + E+++SRWAMLG +G + PE+ +K G+ W+ AG A+ F+ ++ L H I W V + + Y + +G YPGG F+PL A Sbjct: 64 TPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCIFPELLSKNGVQFGEAVWFKAG-AQIFSEGGLDYLGNPNLVHAQSILAIWAT-----QVVLMGLIEGYRVGGGPLGEGLDPLYPGGAFDPLGLA 199 HSP 2 Score: 30.8018 bits (68), Expect = 6.048e-15 Identity = 17/36 (47.22%), Postives = 21/36 (58.33%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 E K KE+ NG+LAM + FG + A KG ENL Sbjct: 207 ELKVKEIKNGRLAMFSMFGFFVQA-IVTGKGPIENL 241
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB23_SOYBN (Chlorophyll a-b binding protein 3, chloroplastic OS=Glycine max GN=CAB3 PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 6.048e-15 Identity = 53/179 (29.61%), Postives = 82/179 (45.81%), Query Frame = 3 Query: 192 REVALKPVSSSASFKVEAKGEWLPGLAS--PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGK-------AEYFASSS--------TLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFA 674 R+ K VSS + + + ++L + P+YL G PGD G+D GL+ DPE + E+++SRWAMLG +G + PE+ ++ G+ W+ AG +Y + S ++ + IL VE ++ P DPI YPGG F+PL A Sbjct: 34 RKTVTKQVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVE--GYRIAGGPLGEVTDPI------------YPGGSFDPLGLA 198 HSP 2 Score: 31.5722 bits (70), Expect = 6.048e-15 Identity = 18/36 (50.00%), Postives = 21/36 (58.33%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 E K KEL NG+LAM + FG + A KG ENL Sbjct: 206 ELKVKELKNGRLAMFSMFGFFVQA-IVTGKGPLENL 240
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB22_PEA (Chlorophyll a-b binding protein AB80, chloroplastic OS=Pisum sativum GN=AB80 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.853e-15 Identity = 47/143 (32.87%), Postives = 72/143 (50.35%), Query Frame = 3 Query: 273 SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-W-QDIKNPGSVNQDPIFKQYSLPPNEVG------YPGGIFNPLNFA 674 SP+YL G PGD G+D GL+ DPE + E+++SRWAMLG +G + PE+ ++ G+ W+ AG ++ F+ ++ L H I W + G+V + Y + +G YPGG F+PL A Sbjct: 69 SPSYLTGEFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAG-SQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAV------EGYRIAGGPLGEVVDPLYPGGSFDPLGLA 204 HSP 2 Score: 31.5722 bits (70), Expect = 7.853e-15 Identity = 18/36 (50.00%), Postives = 21/36 (58.33%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 E K KEL NG+LAM + FG + A KG ENL Sbjct: 212 ELKVKELKNGRLAMFSMFGFFVQA-IVTGKGPLENL 246
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB22_ORYSJ (Chlorophyll a-b binding protein 2, chloroplastic OS=Oryza sativa subsp. japonica GN=CAB2R PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.862e-15 Identity = 63/230 (27.39%), Postives = 98/230 (42.61%), Query Frame = 3 Query: 36 ASAFFPTTTPALRGS*LSSG-NMATVTTQASAAVFRPCASKSRFLTGSSGKLNREVALKPVSSSASFKVEAKGEWLPGLASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGK-------AEYFASSS--------TLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFA 674 A+A ++PAL G + +T + SAA +P AS S + +R + L P+S P+YL G PGD G+D GL+ DPE + E+++SRWAMLG +G + PE+ + G+ W+ AG +Y + S ++ ++ +L VE ++ P DP+ YPGG F+PL A Sbjct: 2 AAATMALSSPALAGKAAAKVFGEGRITMRKSAAKPKPAASGSPWYGA-----DRVLYLGPLSGEP----------------PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWAVQVVLMGAVE--GYRIAGGPLGEVVDPL------------YPGGSFDPLGLA 196 HSP 2 Score: 30.8018 bits (68), Expect = 7.862e-15 Identity = 17/36 (47.22%), Postives = 21/36 (58.33%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 E K KE+ NG+LAM + FG + A KG ENL Sbjct: 204 ELKVKEIKNGRLAMFSMFGFFVQA-IVTGKGPLENL 238
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.022e-14 Identity = 49/162 (30.25%), Postives = 75/162 (46.30%), Query Frame = 3 Query: 246 KGEWLPGLAS--PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVF-TKIGI-INVPQWYDAGK-------AEYFASSSTL--------FVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFA 674 + +WL ++ P YL G PGD G+D GL+ DPE K Y + E++++RWA+LG +G+L PE+ T G+ P W+ AG +Y S + + ++ +L +E R P DP+ YPG F+PL A Sbjct: 44 RAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRVNG--GPAGEGLDPL------------YPGESFDPLGLA 191 HSP 2 Score: 28.8758 bits (63), Expect = 1.022e-14 Identity = 16/36 (44.44%), Postives = 21/36 (58.33%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 E K KE+ NG+LAM + FG + A KG +NL Sbjct: 199 ELKVKEIKNGRLAMFSCFGFFVQA-IVTGKGPIQNL 233
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.326e-14 Identity = 63/206 (30.58%), Postives = 98/206 (47.57%), Query Frame = 3 Query: 99 MATVTTQASAAVFRPCASK----SRFLTGSSGKLNREVALK--PVSSSASFKVEAKGEWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPPNEVG---YPGGIFNPLNFA 674 MA T S++ F A K S +TG+ R+ K P+SS + + + ++L + SP+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ + G+ W+ AG ++ F+ ++ L H I W + G+V ++ P EV YPGG F+PL A Sbjct: 1 MAAATMALSSSSFAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG-SQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG---YRVAGGPLGEVVDPLYPGGSFDPLGLA 202 HSP 2 Score: 28.8758 bits (63), Expect = 1.326e-14 Identity = 16/36 (44.44%), Postives = 20/36 (55.56%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 E K K + NG+LAM + FG + A KG ENL Sbjct: 210 ELKVKHIKNGRLAMFSMFGFFVQA-IVTGKGPLENL 244
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.326e-14 Identity = 54/180 (30.00%), Postives = 89/180 (49.44%), Query Frame = 3 Query: 165 LTGSSGKLNREVALK--PVSSSASFKVEAKGEWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPPNEVG---YPGGIFNPLNFA 674 +TG+ + R+ K PVSS + + + ++L + +P+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ + G+ W+ AG ++ F+ ++ L H I W + G++ ++ P EV YPGG F+PL A Sbjct: 27 ITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG-SQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAIEG---YRVAGGPLGEVTDPLYPGGSFDPLGLA 202 HSP 2 Score: 30.0314 bits (66), Expect = 1.326e-14 Identity = 16/37 (43.24%), Postives = 22/37 (59.46%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENLL 795 E K KE+ NG+LAM + FG + A KG +NL+ Sbjct: 210 ELKVKEIKNGRLAMFSMFGFFVQA-IVTGKGPLDNLV 245
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.326e-14 Identity = 64/206 (31.07%), Postives = 97/206 (47.09%), Query Frame = 3 Query: 99 MATVTTQASAAVFRPCASK----SRFLTGSSGKLNREVA--LKPVSSSASFKVEAKGEWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPPNEVG---YPGGIFNPLNFA 674 MA T S+ F A K S +TG+ R+ A K VSS + + + ++L + SP+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ + G+ W+ AG ++ F+ ++ L H I W + G+V ++ P EV YPGG F+PL A Sbjct: 1 MAASTMALSSPSFAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG-SQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG---YRVAGGPLGEVVDPLYPGGSFDPLGLA 202 HSP 2 Score: 30.8018 bits (68), Expect = 1.326e-14 Identity = 17/36 (47.22%), Postives = 21/36 (58.33%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 E K KE+ NG+LAM + FG + A KG ENL Sbjct: 210 ELKVKEIKNGRLAMFSMFGFFVQA-IVTGKGPLENL 244
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.327e-14 Identity = 59/197 (29.95%), Postives = 89/197 (45.18%), Query Frame = 3 Query: 102 ATVTTQASAAVFRPCASKSRFLTGSSGKLNREVALKPVSSSASFKVEAKGEWLPGLASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPPNEVG---YPGGIFNPLNFA 674 A VT + +AA +P AS G +R + L P+S P+YL G PGD G+D GL+ DPE + E+++SRWAMLG +G + PE+ + G+ W+ AG ++ F+ ++ L H I W + G++ ++ P EV YPGG F+PL A Sbjct: 28 ARVTMRKTAAKAKPAASSGSPWYGP----DRVLYLGPLSGEP----------------PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAG-SQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEG---YRVAGGPLGEVVDPLYPGGTFDPLGLA 200 HSP 2 Score: 30.8018 bits (68), Expect = 1.327e-14 Identity = 17/36 (47.22%), Postives = 21/36 (58.33%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 + K KEL NG+LAM + FG + A KG ENL Sbjct: 208 DVKVKELKNGRLAMFSMFGFFVQA-IVTGKGPLENL 242 The following BLAST results are available for this feature:
BLAST of EY665772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665772 ID=EY665772; Name=EY665772; organism=Citrus sinensis; type=EST; length=922bpback to top |