EY665772
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB21_SINAL (Chlorophyll a-b binding protein 1, chloroplastic OS=Sinapis alba GN=CAB1 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.781e-14 Identity = 39/141 (27.66%), Postives = 66/141 (46.81%), Query Frame = 3 Query: 276 PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGK-------AEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFA 674 P+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ + G+ W+ AG +Y + S + + ++ ++ + P+ + ++ YPGG F+PL A Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAGEGPLGE-----AEDLLYPGGSFDPLGLA 201 HSP 2 Score: 30.8018 bits (68), Expect = 3.781e-14 Identity = 17/36 (47.22%), Postives = 21/36 (58.33%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 E K KE+ NG+LAM + FG + A KG ENL Sbjct: 209 ELKVKEIKNGRLAMFSMFGFFVQA-IVTGKGPLENL 243
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB215_PEA (Chlorophyll a-b binding protein 215, chloroplastic OS=Pisum sativum GN=CAB215 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.782e-14 Identity = 48/150 (32.00%), Postives = 68/150 (45.33%), Query Frame = 3 Query: 276 PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGKAEYFA----------------SSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFA 674 P+YL G PGD G+D GL+ DPE + E+++SRWAMLG +G PE+ K G+ W+ AG ++ FA S ++ + +L +VE R P DP+ YPGG F+PL A Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAG-SQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGG--GPLGEGLDPL------------YPGGAFDPLGLA 200 HSP 2 Score: 30.4166 bits (67), Expect = 3.782e-14 Identity = 17/36 (47.22%), Postives = 21/36 (58.33%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 E K KEL NG+LAM + FG + A KG +NL Sbjct: 208 ELKVKELKNGRLAMFSMFGFFVQA-IVTGKGPIQNL 242
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 4.905e-14 Identity = 47/139 (33.81%), Postives = 70/139 (50.36%), Query Frame = 3 Query: 276 PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPPNEVG---YPGGIFNPLNFA 674 P+YL G PGD G+D GL+ DPE + E+++SRWAMLG +G + PE+ + G+ W+ AG A+ F+ ++ L H I W + G++ ++ P EV YPGG F+PL A Sbjct: 79 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAG-AQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEG---YRVAGGPLGEVTDPIYPGGNFDPLGLA 213 HSP 2 Score: 30.0314 bits (66), Expect = 4.905e-14 Identity = 16/36 (44.44%), Postives = 21/36 (58.33%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 + K KE+ NG+LAM + FG + A KG ENL Sbjct: 221 DVKVKEIKNGRLAMFSMFGFFVQA-IVTGKGPIENL 255
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 6.382e-14 Identity = 63/208 (30.29%), Postives = 97/208 (46.63%), Query Frame = 3 Query: 99 MATVTTQASAAVFRPCASK---SRFLTGSSGKLNREVALKP--VSSSASFKVEAKGEWLPGLAS--PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPPNEVG------YPGGIFNPLNFA 674 MA T S++ F A K S L G + R+ A K VSSS+ + + +L L+ P+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ + G+ W+ AG ++ F+ ++ L H + W + G+V + Y + +G YPGG F+PL A Sbjct: 1 MAATTMSLSSSSFAGKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAG-SQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAV------EGYRIAGGPLGEIVDPLYPGGSFDPLGLA 201 HSP 2 Score: 28.8758 bits (63), Expect = 6.382e-14 Identity = 16/36 (44.44%), Postives = 21/36 (58.33%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 E K KE+ NG+LAM + FG + A KG E+L Sbjct: 209 ELKVKEIKNGRLAMFSMFGFFVQA-IVTGKGPLEDL 243
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB22_MAIZE (Chlorophyll a-b binding protein, chloroplastic OS=Zea mays PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.384e-14 Identity = 59/205 (28.78%), Postives = 90/205 (43.90%), Query Frame = 3 Query: 87 SSGNMATVTTQASAAVFRPCASKSRFLTGSSGKLNREVALKPVSSSASFKVEAKGEWLPGLASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPPNEVG------YPGGIFNPLNFA 674 SS A VT + +AA +P A+ G +R + L P+S P+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ + G+ W+ AG ++ F+ ++ L H I W + G+V + Y + +G YPGG F+PL A Sbjct: 23 SSFGEARVTMRKTAAKAKPAAASGSPWYGP----DRVLYLGPLSGEP----------------PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG-SQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAV------EGYRIAGGPLGEVVDPLYPGGSFDPLGLA 200 HSP 2 Score: 30.8018 bits (68), Expect = 6.384e-14 Identity = 18/36 (50.00%), Postives = 21/36 (58.33%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 E K KEL G+LAML+ FG + A KG ENL Sbjct: 208 ELKVKELKKGRLAMLSMFGFFVQA-IVTGKGPLENL 242
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB22_HORVU (Chlorophyll a-b binding protein 2, chloroplastic OS=Hordeum vulgare GN=CAB2 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.294e-14 Identity = 46/140 (32.86%), Postives = 69/140 (49.29%), Query Frame = 3 Query: 273 SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPPNEVG---YPGGIFNPLNFA 674 SP+YL G PGD G+D GL+ DPE + E+++ RWAMLG +G + PE+ + G+ W+ G ++ F+ ++ L H I W + G+V ++ P EV YPGG F+PL A Sbjct: 64 SPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPELLARNGVKFGEAVWFKKG-SQIFSEGGLQYLGNPSLVHAQSILAIWACQVVLMGAVEG---YRVAGGPLGEVVDPLYPGGSFDPLGLA 199 HSP 2 Score: 30.8018 bits (68), Expect = 8.294e-14 Identity = 17/36 (47.22%), Postives = 21/36 (58.33%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 E K KE+ NG+LAM + FG + A KG ENL Sbjct: 207 ELKVKEIKNGRLAMFSMFGFFVQA-IVTGKGPLENL 241
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 8.375e-14 Identity = 46/139 (33.09%), Postives = 70/139 (50.36%), Query Frame = 3 Query: 276 PTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPPNEVG---YPGGIFNPLNFA 674 P+YL G PGD G+D GL+ DPE + E+++S WAMLG +G + PE+ ++ G+ W+ AG ++ F+ ++ L H I W + G+V ++ P EV YPGG F+PL A Sbjct: 7 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFGEAVWFKAG-SQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG---YRIAGGPLGEVTDPIYPGGSFDPLGLA 141 HSP 2 Score: 31.5722 bits (70), Expect = 8.375e-14 Identity = 18/36 (50.00%), Postives = 21/36 (58.33%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 E K KEL NG+LAM + FG + A KG ENL Sbjct: 149 ELKVKELKNGRLAMFSMFGFFVQA-IVTGKGPLENL 183
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.402e-13 Identity = 47/148 (31.76%), Postives = 71/148 (47.97%), Query Frame = 3 Query: 273 SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGIINV--PQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIK------------NPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFA 674 +P YL G PGD G+D GL+ DP+ Y + EL+++RWA+LG +G+L PE+ ++ + P W+ AG A+ FA ++ L H I ++ N GS + L + YPGG F+PL A Sbjct: 50 TPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAG-AQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGS--------EGFLDDLDTLYPGGPFDPLGLA 188 HSP 2 Score: 26.1794 bits (56), Expect = 1.402e-13 Identity = 15/36 (41.67%), Postives = 20/36 (55.56%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 E K KE+ NG+LAM + G + A KG +NL Sbjct: 196 ELKVKEIKNGRLAMFSCLGFFVQA-IVTGKGPVQNL 230
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 3.984e-13 Identity = 51/164 (31.10%), Postives = 80/164 (48.78%), Query Frame = 3 Query: 207 KPVSSSASFKVEAKGEWLPGLA--SPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTKIGI-INVPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRR-WQ-DIKNPGSVNQDPIFKQYSLPPNEVG---YPGGIFNPLNFA 674 KPVSS + + + ++L + +P+YL G PGD G+D GL+ DP + E+++ RW MLG +G + PE+F + G+ W+ AG ++ F ++ L H I W + G+V ++ P EV YPGG F+PL A Sbjct: 42 KPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKAG-SQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG---YRVAGGPLGEVIDPLYPGGSFDPLGLA 201 HSP 2 Score: 29.261 bits (64), Expect = 3.984e-13 Identity = 16/36 (44.44%), Postives = 21/36 (58.33%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENL 792 E + KE+ NG+LAM + FG + A KG ENL Sbjct: 209 ELEVKEIKNGRLAMFSMFGFFVQA-IVTGKGPLENL 243
BLAST of EY665772 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 62.3882 bits (150), Expect = 4.185e-12 Identity = 55/191 (28.80%), Postives = 80/191 (41.88%), Query Frame = 3 Query: 171 GSSGKLNREVALKPVSSSAS-----FKVEAKGEWLPGLASPTYLNGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVVGMLLPEVFTK---IGIINVPQWYDAGKA-------EYFASSSTL--------FVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFA 674 G +GK ++ A K VS S+S + +A W P G PGD G+D GL+ DPE K Y + EL+++R +LG +GM+ PE+ I + W+ AG A Y + S + ++ +L VE R P DP+ YPG F+PL A Sbjct: 34 GRAGKSTKKGA-KAVSKSSSSANQFYGPDATSGWDLQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNG--GPAGEGLDPL------------YPGEAFDPLGLA 209 HSP 2 Score: 30.0314 bits (66), Expect = 4.185e-12 Identity = 21/48 (43.75%), Postives = 24/48 (50.00%), Query Frame = 1 Query: 685 EAKEKELANGKLAMLAFFGIYWSAQWDQAKGQFENLLQT*SLNPWEQN 828 E K KE+ NG+LAM A G + A KG ENL NP E N Sbjct: 217 ELKVKEIKNGRLAMFACLGFFVQA-IVTGKGPIENLTDH-LANPAENN 262 The following BLAST results are available for this feature:
BLAST of EY665772 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >EY665772 ID=EY665772; Name=EY665772; organism=Citrus sinensis; type=EST; length=922bpback to top |