CX675012

Overview
NameCX675012
Unique NameCX675012
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length808
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_VIBPA (Hydroxyacylglutathione hydrolase OS=Vibrio parahaemolyticus GN=gloB PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.650e-33
Identity = 78/192 (40.62%), Postives = 105/192 (54.69%), Query Frame = 2 
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            L+I+ +P   DNY +L+ + D     VVDP +A PV+D L      L  I              +L  R    V   G   + IP +   + +GDK    G    V+  PGHT GHI +   G + +F GD LFS  CG++FEGTP QMF SL KI +LP++T V+C HEYT SN  FAL++EP+NE L+ Y
Sbjct:    2 LEIKSIPAFNDNYIWLIQNSDK-RCAVVDPGDAQPVLDYLQANELTLEAILVTHHHNDHIGGVPDL-VRAFPHVTVVGPKAEPIPTLTTPMEEGDKLELFGEIFLVLGLPGHTLGHIGYV--GDSKLFCGDVLFSAGCGRIFEGTPEQMFESLSKIAALPEETQVFCAHEYTASNVAFALAVEPDNEQLRQY 189
[Close]
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_SHISS (Hydroxyacylglutathione hydrolase OS=Shigella sonnei (strain Ss046) GN=gloB PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.650e-33
Identity = 77/192 (40.10%), Postives = 110/192 (57.29%), Query Frame = 2 
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS  CG+LFEGT  QM+ SL K+ +LPDDT V C HEYTLSN KFALSI P++ ++  Y
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYF--SKPYLFCGDTLFSGGCGRLFEGTASQMYQSLNKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDY 188
[Close]
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_SHIB3 (Hydroxyacylglutathione hydrolase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=gloB PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.650e-33
Identity = 77/192 (40.10%), Postives = 110/192 (57.29%), Query Frame = 2 
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS  CG+LFEGT  QM+ SL K+ +LPDDT V C HEYTLSN KFALSI P++ ++  Y
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYF--SKPYLFCGDTLFSGGCGRLFEGTASQMYQSLNKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDY 188
[Close]
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_ECO8A (Hydroxyacylglutathione hydrolase OS=Escherichia coli O8 (strain IAI1) GN=gloB PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.650e-33
Identity = 77/192 (40.10%), Postives = 110/192 (57.29%), Query Frame = 2 
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS  CG+LFEGT  QM+ SL K+ +LPDDT V C HEYTLSN KFALSI P++ ++  Y
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAITANNWQPEAIFLTHHHHDHVGGVKELVEKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYF--SKPYLFCGDTLFSGGCGRLFEGTASQMYQSLNKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDY 188
[Close]
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_ECO55 (Hydroxyacylglutathione hydrolase OS=Escherichia coli (strain 55989 / EAEC) GN=gloB PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.650e-33
Identity = 77/192 (40.10%), Postives = 110/192 (57.29%), Query Frame = 2 
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS  CG+LFEGT  QM+ SL K+ +LPDDT V C HEYTLSN KFALSI P++ ++  Y
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAITANNWQPEAIFLTHHHHDHVGGVKELVEKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYF--SKPYLFCGDTLFSGGCGRLFEGTASQMYQSLNKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDY 188
[Close]
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_ECO24 (Hydroxyacylglutathione hydrolase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=gloB PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.650e-33
Identity = 77/192 (40.10%), Postives = 110/192 (57.29%), Query Frame = 2 
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS  CG+LFEGT  QM+ SL K+ +LPDDT V C HEYTLSN KFALSI P++ ++  Y
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYF--SKPYLFCGDTLFSGGCGRLFEGTASQMYQSLNKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDY 188
[Close]
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2C_ARATH (Hydroxyacylglutathione hydrolase cytoplasmic OS=Arabidopsis thaliana GN=GLX2-2 PE=1 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 7.650e-33
Identity = 81/202 (40.10%), Postives = 116/202 (57.43%), Query Frame = 2 
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARY-GAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVI--DTPGHTRGHISFYFPG----SAAVFTGDTLFSLSCGKLFEGTPGQMFSSL-QKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAA 808
            ++I  VPCL+DNY+YL+ D  TG   VVDP +   VI +  +    + ++              ++K      KV G  +DK  + G    +++GDK +  G +++++   TP HT+GHIS+Y  G    + AVFTGDTLF   CGK FEGT  QM+ SL   + +LP  T VYCGHEYT+ N +FAL++EPNN  +Q   A
Sbjct:    1 MKIFHVPCLQDNYSYLIIDESTGDAAVVDPVDPEKVIASAEKHQAKIKFVLTTHHHWDHAGGNEKIKQLVPDIKVYGGSLDK--VKGCTDAVDNGDK-LTLGQDINILALHTPCHTKGHISYYVNGKEGENPAVFTGDTLFVAGCGKFFEGTAEQMYQSLCVTLAALPKPTQVYCGHEYTVKNLEFALTVEPNNGKIQQKLA 199
[Close]
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_VIBHB (Hydroxyacylglutathione hydrolase OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=gloB PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.991e-33
Identity = 78/192 (40.62%), Postives = 104/192 (54.17%), Query Frame = 2 
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            L+I+ +P   DNY +L+ + D     VVDP +A PV++ L      L  I              +L  R    V   G   + IP +   + +GDK    G    V+  PGHT GHI +   G   +F GD LFS  CG++FEGTP QMF SL KIM LP++T V+C HEYT SN  FAL++EP+NE L+ Y
Sbjct:    2 LEIKSIPAFNDNYIWLIQNSDK-RCAVVDPGDAKPVLEYLQANELTLEAILITHHHNDHIGGVSDL-VRAFPHVSVVGPKAEPIPTLTNAMEEGDKLELFGEIFMVLGLPGHTLGHIGYV--GDGKLFCGDVLFSAGCGRIFEGTPEQMFESLSKIMKLPEETEVFCAHEYTASNVAFALAVEPDNEHLRQY 189
[Close]
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_VIBFM (Hydroxyacylglutathione hydrolase OS=Vibrio fischeri (strain MJ11) GN=gloB PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.991e-33
Identity = 75/192 (39.06%), Postives = 109/192 (56.77%), Query Frame = 2 
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            L ++ +P   DNY +L+H+ D   V VVDP +A PV++ +   +  L  I              EL  ++ +  +  G + + IP +   + DGD       +  V+  PGHT GH+++   G   +F GD LFS  CG+LFEGT  QMF+SLQK+ +LPD+T VYC HEYT SN  FAL++EP+N+ L  Y
Sbjct:    2 LSVKSIPAFNDNYIWLIHNNDNHCV-VVDPGDATPVLECIKEHDFILDAILITHHHHDHIGGVPELVRQFPSVNV-VGPENEPIPTLTHPVGDGDFVELFDEQFMVLGVPGHTNGHVAYV--GDEKLFCGDALFSAGCGRLFEGTAEQMFNSLQKMAALPDETEVYCAHEYTASNLAFALAVEPDNDYLLRY 189
[Close]
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_VIBF1 (Hydroxyacylglutathione hydrolase OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=gloB PE=3 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 9.991e-33
Identity = 76/192 (39.58%), Postives = 108/192 (56.25%), Query Frame = 2 
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            L ++ +P   DNY +L+H+ D   V VVDP +A PV++ +   +  L  I              EL  ++   V   G + + IP +   + DGD       +  V+  PGHT GH+++   G   +F GD LFS  CG+LFEGT  QMF+SLQK+ +LPD+T VYC HEYT SN  FAL++EP+N+ L  Y
Sbjct:    2 LSVKSIPAFNDNYIWLIHNNDNHCV-VVDPGDATPVLECIKEHDFILDAILITHHHHDHIGGVPELVRQF-PNVNVVGPENEPIPTLTHPVGDGDFVELFDEQFMVLGVPGHTNGHVAYI--GDEKLFCGDALFSAGCGRLFEGTAEQMFNSLQKMAALPDETEVYCAHEYTASNLAFALAVEPDNDYLLRY 189
The following BLAST results are available for this feature:
BLAST of CX675012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 281
Match NameE-valueIdentityDescription
GLO2_VIBPA7.650e-3340.63Hydroxyacylglutathione hydrolase OS=Vibrio parahae... [more]
GLO2_SHISS7.650e-3340.10Hydroxyacylglutathione hydrolase OS=Shigella sonne... [more]
GLO2_SHIB37.650e-3340.10Hydroxyacylglutathione hydrolase OS=Shigella boydi... [more]
GLO2_ECO8A7.650e-3340.10Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECO557.650e-3340.10Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECO247.650e-3340.10Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2C_ARATH7.650e-3340.10Hydroxyacylglutathione hydrolase cytoplasmic OS=Ar... [more]
GLO2_VIBHB9.991e-3340.63Hydroxyacylglutathione hydrolase OS=Vibrio harveyi... [more]
GLO2_VIBFM9.991e-3339.06Hydroxyacylglutathione hydrolase OS=Vibrio fischer... [more]
GLO2_VIBF19.991e-3339.58Hydroxyacylglutathione hydrolase OS=Vibrio fischer... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_59B01_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-59B01-C1-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675012 ID=CX675012; Name=CX675012; organism=Citrus sinensis; type=EST; length=808bp
GATGCAAATGATCTCCAGAGCATCATCTGCTGCCATGGCCTCCTTCACTT
GTTCAAGGGGGCAGAGTGGCCTTTGTGTTGTGCCAGGACCAAGACAACTT
TGCCTTAGAAAGGGTCTTCTGTATGGTTTCATGCGCTTATTATCAATGCC
ATTCAAGACATTGCATTTAGCAAGTCGATCTCTTAGAGTTGCTGAGTTTT
GCAGTATCTCCAACATGTCATCATCGTTGCAAATTGAGTTGGTACCGTGT
CTCAGGGACAACTATGCATATCTTTTACATGACATGGACACAGGTACTGT
TGGAGTTGTTGATCCTTCTGAAGCTGTTCCTGTGATAGATGCTTTGAGTA
GGAAAAACCGAAATCTGACTTACATTCTAAATACACATCATCATCATGAT
CACACCGGTGGTAATTTGGAGCTAAAAGCAAGGTACGGTGCAAAGGTGAT
TGGTTCAGGAGTAGACAAGGATAGGATCCCTGGCATTGATATAGTTTTGA
ATGATGGAGACAAATGGATGTTTGCTGGTCATGAGGTGCATGTGATTGAT
ACGCCTGGCCATACCCGAGGTCATATTAGCTTCTACTTTCCTGGATCAGC
GGCAGTTTTTACTGGGGACACCTTGTTCAGCTTATCCTGTGGCAAGCTTT
TTGAAGGAACCCCTGGGCAGATGTTTTCTTCCCTTCAGAAGATAATGTCT
CTGCCAGATGATACAAATGTATATTGTGGTCATGAATATACGCTGAGTAA
TTCAAAATTTGCATTGTCCATAGAACCCAACAATGAGGCCCTTCAATCAT
ATGCAGCG
back to top