CX675012

Overview
NameCX675012
Unique NameCX675012
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length808
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_SHEAM (Hydroxyacylglutathione hydrolase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=gloB PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.991e-33
Identity = 83/198 (41.92%), Postives = 110/198 (55.56%), Query Frame = 2
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXEL----KARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAG--HEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            L I  +P   DNY +++   D G V VVDP +A+PVI+ L R N  LT +              +L    K+   +  +   V  D     D++  DGD    +G    V V+  PGHT  H++F      A+F GDTLFS  CG+LFEG  GQ++ SL K+ SLPDDT VYC HEYTLSN +FAL++EP N+ LQ Y
Sbjct:    2 LDIRPIPAFADNYIWMIVLPDGGAV-VVDPGDAMPVINTLQRLNLQLTAVLLTHHHRDHNGGINQLRDWAKSNGQSFTVYGAVTSDYS---DVLCRDGDTVDISGLTSPVRVLSVPGHTLDHLAFVVDN--ALFCGDTLFSGGCGRLFEGDAGQLYDSLAKLASLPDDTLVYCAHEYTLSNLRFALAVEPQNQCLQDY 193          
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_CITK8 (Hydroxyacylglutathione hydrolase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=gloB PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 9.991e-33
Identity = 78/193 (40.41%), Postives = 109/193 (56.48%), Query Frame = 2
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVI-GSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            + +  +P  +DNY ++L + + G   +VDP EA PV++A+  KN     I              EL   +   V+ G    +D+  G   V+ DGD  +  GHE  +  TPGHT GHI ++      +F GDTLFS  CG+LFEGT  QM+ SL+KI +LPDDT + C HEYTL+N KFALSI P++  +  Y
Sbjct:    1 MNLNSIPAFQDNYIWVLSNNE-GRCLIVDPGEAAPVLNAIKEKNWQPEAIFLTHHHHDHVGGVKELLQHFPHVVVYGPAETQDK--GTTRVVKDGDSALVLGHEFSIFATPGHTLGHICYF--SHPYLFCGDTLFSGGCGRLFEGTASQMYQSLKKISALPDDTLICCAHEYTLANMKFALSILPHDSFINEY 188          
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_SHIFL (Hydroxyacylglutathione hydrolase OS=Shigella flexneri GN=gloB PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.305e-32
Identity = 77/192 (40.10%), Postives = 111/192 (57.81%), Query Frame = 2
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS  CG+LFEGT  QM+ SL+K+ +LPDDT V C HEYTLSN KFALSI P++ ++  Y
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAITANNWQPEAIFLTHHHHDHVGGVKELVEKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVITTPGHTLGHICYF--SKPYLFCGDTLFSGGCGRLFEGTALQMYQSLKKLSALPDDTLVCCAHEYTLSNMKFALSIFPHDLSINDY 188          
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_SHIF8 (Hydroxyacylglutathione hydrolase OS=Shigella flexneri serotype 5b (strain 8401) GN=gloB PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.305e-32
Identity = 77/192 (40.10%), Postives = 111/192 (57.81%), Query Frame = 2
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS  CG+LFEGT  QM+ SL+K+ +LPDDT V C HEYTLSN KFALSI P++ ++  Y
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAITANNWQPEAIFLTHHHHDHVGGVKELVEKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVITTPGHTLGHICYF--SKPYLFCGDTLFSGGCGRLFEGTALQMYQSLKKLSALPDDTLVCCAHEYTLSNMKFALSIFPHDLSINDY 188          
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_SHIBS (Hydroxyacylglutathione hydrolase OS=Shigella boydii serotype 4 (strain Sb227) GN=gloB PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.305e-32
Identity = 77/192 (40.10%), Postives = 111/192 (57.81%), Query Frame = 2
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS  CG+LFEGT  QM+ SL+K+ +LPDDT V C HEYTLSN KFALSI P++ ++  Y
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAITANNWQPEAIFLTHHHHDHVGGVKELVEKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVITTPGHTLGHICYF--SKPYLFCGDTLFSGGCGRLFEGTALQMYQSLKKLSALPDDTLVCCAHEYTLSNMKFALSIFPHDLSINDY 188          
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_PSEPW (Hydroxyacylglutathione hydrolase OS=Pseudomonas putida (strain W619) GN=gloB PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.305e-32
Identity = 80/190 (42.11%), Postives = 109/190 (57.37%), Query Frame = 2
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRN--LTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYF--PGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNN 784
            +QI+ +P   DNY +LL D       VVDP +A PV +A    N +  L  I               LK   GA+V  SG   +RIP  D+ L++GD+    G    V+  PGHT GHI+F+   P +  +F+GDTLF+  CG++FEGTP QM  +L ++ SLP+ T VYC HEYTLSN +FA ++EP N
Sbjct:    2 IQIDALPAFSDNYIWLLQDTAKRRCAVVDPGDAAPV-EAWLAANPDWVLEDILVTHHHNDHVGGVERLKKLTGARV--SGPANERIPCRDLALDEGDEVTAVGVTFQVLAVPGHTLGHIAFFSDQPATPVLFSGDTLFAAGCGRMFEGTPEQMQPALARLASLPERTEVYCAHEYTLSNLRFAKAVEPQN 188          
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_PSEP1 (Hydroxyacylglutathione hydrolase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=gloB PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.305e-32
Identity = 78/193 (40.41%), Postives = 110/193 (56.99%), Query Frame = 2
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNR-NLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYF--PGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQ 796
            +QI+ +P   DNY +LL D       VVDP +A PV   L+      L+ I               L+   GA+V G     +RIPG D+ L++GD+    G    V+  PGHT GHI+F+   P +  +F+GDTLF+  CG++FEGTP QM  +L ++ +LP+ T VYC HEYTLSN +FA ++EP N  +Q
Sbjct:    2 IQIDALPAFSDNYIWLLQDTAKRRCAVVDPGDAGPVERWLAANPEWVLSDILVTHHHNDHVGGVERLRQLTGARVCGPA--NERIPGRDLALDEGDRVDVLGVTFQVLAVPGHTLGHIAFFSDQPATPILFSGDTLFAAGCGRMFEGTPEQMQPALARLAALPEQTAVYCAHEYTLSNLRFAKAVEPTNPHVQ 192          
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_ECOSE (Hydroxyacylglutathione hydrolase OS=Escherichia coli (strain SE11) GN=gloB PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.305e-32
Identity = 76/192 (39.58%), Postives = 110/192 (57.29%), Query Frame = 2
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS  CG+LFEGT  QM+ S+ K+ +LPDDT V C HEYTLSN KFALSI P++ ++  Y
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYF--SKPYLFCGDTLFSGGCGRLFEGTASQMYQSINKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDY 188          
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_ECOLC (Hydroxyacylglutathione hydrolase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=gloB PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.305e-32
Identity = 77/192 (40.10%), Postives = 110/192 (57.29%), Query Frame = 2
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS  CG+LFEGT  QM+ SL+K+  LPDDT V C HEYTLSN KFALSI P++ ++  Y
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYF--SKPYLFCGDTLFSGGCGRLFEGTASQMYQSLKKLSVLPDDTLVCCAHEYTLSNMKFALSILPHDLSINDY 188          
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_SHIDS (Hydroxyacylglutathione hydrolase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=gloB PE=3 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 1.704e-32
Identity = 76/192 (39.58%), Postives = 111/192 (57.81%), Query Frame = 2
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSY 802
            + +  +P   DNY ++L+D + G   +VDP +A PV++A++  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS  CG+LFEGT  QM+ SL+K+ +LPDDT V C HEYTLSN +FALSI P++ ++  Y
Sbjct:    1 MNLNSIPAFDDNYIWVLND-EAGRCLIVDPGDAEPVLNAIAANNWQPEAIFLTHHHHDHVGGVKELVEKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYF--SKPYLFCGDTLFSGGCGRLFEGTASQMYQSLKKLSALPDDTLVCCAHEYTLSNMEFALSILPHDLSINDY 188          
The following BLAST results are available for this feature:
BLAST of CX675012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 281
Match NameE-valueIdentityDescription
GLO2_SHEAM9.991e-3341.92Hydroxyacylglutathione hydrolase OS=Shewanella ama... [more]
GLO2_CITK89.991e-3340.41Hydroxyacylglutathione hydrolase OS=Citrobacter ko... [more]
GLO2_SHIFL1.305e-3240.10Hydroxyacylglutathione hydrolase OS=Shigella flexn... [more]
GLO2_SHIF81.305e-3240.10Hydroxyacylglutathione hydrolase OS=Shigella flexn... [more]
GLO2_SHIBS1.305e-3240.10Hydroxyacylglutathione hydrolase OS=Shigella boydi... [more]
GLO2_PSEPW1.305e-3242.11Hydroxyacylglutathione hydrolase OS=Pseudomonas pu... [more]
GLO2_PSEP11.305e-3240.41Hydroxyacylglutathione hydrolase OS=Pseudomonas pu... [more]
GLO2_ECOSE1.305e-3239.58Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_ECOLC1.305e-3240.10Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_SHIDS1.704e-3239.58Hydroxyacylglutathione hydrolase OS=Shigella dysen... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_59B01_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-59B01-C1-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675012 ID=CX675012; Name=CX675012; organism=Citrus sinensis; type=EST; length=808bp
GATGCAAATGATCTCCAGAGCATCATCTGCTGCCATGGCCTCCTTCACTT
GTTCAAGGGGGCAGAGTGGCCTTTGTGTTGTGCCAGGACCAAGACAACTT
TGCCTTAGAAAGGGTCTTCTGTATGGTTTCATGCGCTTATTATCAATGCC
ATTCAAGACATTGCATTTAGCAAGTCGATCTCTTAGAGTTGCTGAGTTTT
GCAGTATCTCCAACATGTCATCATCGTTGCAAATTGAGTTGGTACCGTGT
CTCAGGGACAACTATGCATATCTTTTACATGACATGGACACAGGTACTGT
TGGAGTTGTTGATCCTTCTGAAGCTGTTCCTGTGATAGATGCTTTGAGTA
GGAAAAACCGAAATCTGACTTACATTCTAAATACACATCATCATCATGAT
CACACCGGTGGTAATTTGGAGCTAAAAGCAAGGTACGGTGCAAAGGTGAT
TGGTTCAGGAGTAGACAAGGATAGGATCCCTGGCATTGATATAGTTTTGA
ATGATGGAGACAAATGGATGTTTGCTGGTCATGAGGTGCATGTGATTGAT
ACGCCTGGCCATACCCGAGGTCATATTAGCTTCTACTTTCCTGGATCAGC
GGCAGTTTTTACTGGGGACACCTTGTTCAGCTTATCCTGTGGCAAGCTTT
TTGAAGGAACCCCTGGGCAGATGTTTTCTTCCCTTCAGAAGATAATGTCT
CTGCCAGATGATACAAATGTATATTGTGGTCATGAATATACGCTGAGTAA
TTCAAAATTTGCATTGTCCATAGAACCCAACAATGAGGCCCTTCAATCAT
ATGCAGCG
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