CX675012

Overview
NameCX675012
Unique NameCX675012
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length808
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_BRAJA (Hydroxyacylglutathione hydrolase OS=Bradyrhizobium japonicum GN=gloB PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.630e-38
Identity = 79/193 (40.93%), Postives = 110/193 (56.99%), Query Frame = 2
Query:  230 QIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAA 808
            +I    CL DN+ YL+HD++T     +D  EA P++ AL R+   LT I              ELK +Y  +V+        I  +D+ + + D          V++TPGHT  HIS+ F     VF  DTLFS+ CG++FEGT   M+ SL K+ +LPDD  +YCGHEYT SN KFAL+++P+N ALQ+ AA
Sbjct:    4 EIRTFSCLNDNFGYLIHDVETKATASIDAPEAGPILKALEREGWQLTDILITHHHGDHVGGVAELKHKYNCRVVAPHDKTTAIANVDLRVANADVVKVGNLLARVVETPGHTLDHISYVFDTEKTVFAADTLFSIGCGRVFEGTYPMMWDSLLKLRALPDDFKLYCGHEYTASNVKFALTVDPDNAALQARAA 196          
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_BARQU (Hydroxyacylglutathione hydrolase OS=Bartonella quintana GN=gloB PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 4.630e-38
Identity = 78/187 (41.71%), Postives = 109/187 (58.29%), Query Frame = 2
Query:  233 IELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEAL 793
            IE   C  DN+  L+HD  +G    +D  E+  +  AL R+N  L  I              ELK  Y A VIG   +K++I  +D  L   +   F  H +  + TPGHT G +S+YFP    +F+GDTLFSL CG+LFEGTP QM +S +K+  LPD+T +YCGHEYT +N+ FAL+++ +N+ L
Sbjct:    3 IEQFICREDNFGVLIHDERSGYTAAIDAPESKAICSALKRRNWTLQTIFVTHHHHDHIEALAELKQIYKAVVIGPEAEKEKIGHLDQALQPDESLFFGTHTLLALSTPGHTLGSLSYYFPQENLLFSGDTLFSLGCGRLFEGTPAQMLNSFKKLRQLPDETLLYCGHEYTKTNALFALTLDSHNQKL 189          
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_TRIEI (Hydroxyacylglutathione hydrolase OS=Trichodesmium erythraeum (strain IMS101) GN=gloB PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.031e-37
Identity = 84/197 (42.64%), Postives = 113/197 (57.36%), Query Frame = 2
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGA-KVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSA-----AVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQS 799
            + I  +P L DNY +LLHD +     VVDP+E  PVID L      L  I              +L  ++   KV G   D+ RIPG  + L +GD+  FA     V+  PGHT GHI++YFP  A      +F GDTLF+  CG+LFEGTP QM  SL K+ +LPD+T ++C HEYTL N +FA++++ +N  LQS
Sbjct:    1 MDIYRLPALSDNYIFLLHDPNQNIGAVVDPAEVRPVIDKLESLGAELVTIFNTHHHFDHVGANKQLIQKFPQLKVYGGVEDRGRIPGQQVFLQEGDRVHFADRVGEVLFVPGHTIGHIAYYFPSVAFGETGELFCGDTLFAGGCGRLFEGTPAQMVDSLNKLRNLPDNTRIWCAHEYTLKNLQFAITVDKDNTDLQS 197          
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_ANASP (Hydroxyacylglutathione hydrolase OS=Anabaena sp. (strain PCC 7120) GN=gloB PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.031e-37
Identity = 84/196 (42.86%), Postives = 110/196 (56.12%), Query Frame = 2
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYG-AKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSA-----AVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQ 796
            +Q+  +  L DNY +LLHD       VVDP+EA PV+  L++    L  I              +L  ++   KV G   D+ RIPG  + L  GD+  FA     VI  PGHTR HI++YFP         +F GDTLF+  CG+LFEGTP QM  SL K+ SLP++T V+C HEYTL N +FALS++  N  LQ
Sbjct:    1 MQVIRLAALSDNYIFLLHDSHKNIAAVVDPAEAEPVLKQLAQLKAELVAIFNTHHHNDHVGGNQKLIQKFPQVKVYGGAKDQGRIPGQQVFLQPGDRVQFADRVAEVIFVPGHTRAHIAYYFPPQTDDTPGELFCGDTLFAGGCGRLFEGTPAQMVESLTKLRSLPENTRVWCAHEYTLKNLQFALSVDSKNTELQ 196          
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_CYAP7 (Hydroxyacylglutathione hydrolase OS=Cyanothece sp. (strain PCC 7424) GN=gloB PE=3 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.347e-37
Identity = 81/197 (41.12%), Postives = 111/197 (56.35%), Query Frame = 2
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARY-GAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPG-----SAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQS 799
            ++I  +P L DNY +LLHD       VVDP+E  PV+  L +    L  I               L   +    V G   D+ RIPG ++ L +GD+  F      V   PGHTR HI++YFP      +  +F GDT+F+  CG+LFEGTP QM +SL K+ +LPD+T ++C HEYTL+N KFAL++EP N  LQ+
Sbjct:    1 MKIFRLPALSDNYIFLLHDPQRNIAAVVDPAEPEPVLTCLKKLGAELVTIFNTHHHGDHVGANRALIEHFPNLTVYGGEEDRGRIPGQEVFLKEGDRVQFGDRSGEVFFVPGHTRAHIAYYFPPQGEEETGELFCGDTIFAGGCGRLFEGTPAQMVNSLSKLRALPDNTRIWCAHEYTLNNLKFALTVEPENIDLQN 197          
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_BRASB (Hydroxyacylglutathione hydrolase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=gloB PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.759e-37
Identity = 81/192 (42.19%), Postives = 108/192 (56.25%), Query Frame = 2
Query:  233 IELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAA 808
            I +  CL DN+ YL+HD  TG    VD  EA P+I  L      LT I              ELK +YG +V+        I  +D+ +  GD          V++TPGHT  H+S+ F    AVF  DTLFS+ CG++FEGT   M+ SL K+ +LPDD  +YCGHEYT SN KFAL+++ +NEAL++ AA
Sbjct:    5 IRVFTCLSDNFGYLIHDPATGATASVDAPEAGPIIRQLEAAGWTLTDILITHHHHDHVGAVAELKQKYGCRVVAPHDKTTAIADVDLRVGHGDVIKVGELLARVLETPGHTLDHVSYVFDADKAVFAADTLFSVGCGRVFEGTYPMMWDSLLKLRALPDDFRLYCGHEYTASNVKFALTVDGDNEALKARAA 196          
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_PSESM (Hydroxyacylglutathione hydrolase OS=Pseudomonas syringae pv. tomato GN=gloB PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.001e-37
Identity = 83/190 (43.68%), Postives = 115/190 (60.53%), Query Frame = 2
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNR-NLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAA--VFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNE 787
            +QI  +P   DNY +LL D+ +    VVDP +A PV++ L++     LT I              ELK    A+V+G   +   IP  D+ L D D+    G E  V   PGHT GHI+FY   +AA  +F+GDTLF+  CG+LFEGTPGQM +SL+++ +LPD T +YC HEYTLSN +FA ++EP+N+
Sbjct:    2 IQIHALPAFNDNYIWLLQDLSSQQCVVVDPGDAAPVLEWLAQNPHCRLTDILITHHHNDHVGGVVELKQATRARVLGPAAES--IPARDVALADHDRLTVLGLEFVVHAVPGHTLGHIAFYHEDAAAPLLFSGDTLFAAGCGRLFEGTPGQMHASLERLAALPDSTLIYCAHEYTLSNLRFAQAVEPDNQ 189          
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_NITHX (Hydroxyacylglutathione hydrolase OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=gloB PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.001e-37
Identity = 81/191 (42.41%), Postives = 107/191 (56.02%), Query Frame = 2
Query:  233 IELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYA 805
            I L  CL DN+  L+HD  T     +D  EA P+I+AL R+   LT I              ELK +Y  +V+     K  I  +D+ +  GD          V++TPGHT  HIS+ F     VF  DTLFS+ CG++ EGT   M+ SL K+ +LPDD  +YCGHEYT SN KFAL++EPNN AL++ A
Sbjct:    5 IRLFTCLTDNFGVLIHDPATDATAAIDAPEAGPIIEALDREGWTLTDILVTHHHADHIGGIAELKQKYKCRVVAPHDKKAPIANVDLRVGQGDIVKVGTLLGRVLETPGHTLDHISYVFDDEKVVFAADTLFSIGCGRVIEGTYPMMWDSLLKLRALPDDFRLYCGHEYTASNVKFALTVEPNNAALKARA 195          
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_NOSP7 (Hydroxyacylglutathione hydrolase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=gloB PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.140e-36
Identity = 82/196 (41.84%), Postives = 112/196 (57.14%), Query Frame = 2
Query:  227 LQIELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVI-GSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAA-----VFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQ 796
            +Q+  +  L DNY +LL+D       VVDP+EA PV+  L+    +L  I              +L  ++   ++ G   D+ RIPG  + L  GD+  FA     VI  PGHTR HI++YFP   A     +F GDTLFS  CG+LFEGTP QM  SL K+ SLPD+T ++C HEYTL N +FAL+++ +N  LQ
Sbjct:    1 MQVIRLEALSDNYIFLLYDDKRNIAAVVDPAEAQPVLKKLAELKADLVAIFNTHHHNDHVGGNKQLIEKFPQLIVYGGAEDRGRIPGQKVFLQQGDRVEFADRIAEVIFVPGHTRAHIAYYFPPQEASETGDLFCGDTLFSGGCGRLFEGTPTQMVDSLSKLRSLPDNTRIWCAHEYTLKNLQFALTVDGDNADLQ 196          
BLAST of CX675012 vs. ExPASy Swiss-Prot
Match: GLO2_NITWN (Hydroxyacylglutathione hydrolase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=gloB PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.140e-36
Identity = 81/191 (42.41%), Postives = 105/191 (54.97%), Query Frame = 2
Query:  233 IELVPCLRDNYAYLLHDMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXXELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYA 805
            I L  CL DN+  L+HD  TG    +D  EA PVI AL R+   LT I              ELK +Y  +V+        I  +D+ +  GD          V++TPGHT  H+S+ F     VF  DTLFS+ CG++FEGT   M+ SL K+ +LPD   +YCGHEYT SN KFAL+IEPNN  L++ A
Sbjct:    5 IRLFTCLTDNFGVLIHDPATGATAAIDAPEAEPVIQALDREGWVLTDILITHHHSDHVGGVAELKRKYACRVVAPHDRSAEIANVDLRVGQGDIIKVGTLLGRVLETPGHTLDHVSYVFDDEKVVFAADTLFSIGCGRVFEGTYPMMWDSLLKLRALPDSFRLYCGHEYTDSNIKFALTIEPNNPVLKARA 195          
The following BLAST results are available for this feature:
BLAST of CX675012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 281
Match NameE-valueIdentityDescription
GLO2_BRAJA4.630e-3840.93Hydroxyacylglutathione hydrolase OS=Bradyrhizobium... [more]
GLO2_BARQU4.630e-3841.71Hydroxyacylglutathione hydrolase OS=Bartonella qui... [more]
GLO2_TRIEI1.031e-3742.64Hydroxyacylglutathione hydrolase OS=Trichodesmium ... [more]
GLO2_ANASP1.031e-3742.86Hydroxyacylglutathione hydrolase OS=Anabaena sp. (... [more]
GLO2_CYAP71.347e-3741.12Hydroxyacylglutathione hydrolase OS=Cyanothece sp.... [more]
GLO2_BRASB1.759e-3742.19Hydroxyacylglutathione hydrolase OS=Bradyrhizobium... [more]
GLO2_PSESM3.001e-3743.68Hydroxyacylglutathione hydrolase OS=Pseudomonas sy... [more]
GLO2_NITHX3.001e-3742.41Hydroxyacylglutathione hydrolase OS=Nitrobacter ha... [more]
GLO2_NOSP71.140e-3641.84Hydroxyacylglutathione hydrolase OS=Nostoc punctif... [more]
GLO2_NITWN1.140e-3642.41Hydroxyacylglutathione hydrolase OS=Nitrobacter wi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_59B01_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-59B01-C1-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675012 ID=CX675012; Name=CX675012; organism=Citrus sinensis; type=EST; length=808bp
GATGCAAATGATCTCCAGAGCATCATCTGCTGCCATGGCCTCCTTCACTT
GTTCAAGGGGGCAGAGTGGCCTTTGTGTTGTGCCAGGACCAAGACAACTT
TGCCTTAGAAAGGGTCTTCTGTATGGTTTCATGCGCTTATTATCAATGCC
ATTCAAGACATTGCATTTAGCAAGTCGATCTCTTAGAGTTGCTGAGTTTT
GCAGTATCTCCAACATGTCATCATCGTTGCAAATTGAGTTGGTACCGTGT
CTCAGGGACAACTATGCATATCTTTTACATGACATGGACACAGGTACTGT
TGGAGTTGTTGATCCTTCTGAAGCTGTTCCTGTGATAGATGCTTTGAGTA
GGAAAAACCGAAATCTGACTTACATTCTAAATACACATCATCATCATGAT
CACACCGGTGGTAATTTGGAGCTAAAAGCAAGGTACGGTGCAAAGGTGAT
TGGTTCAGGAGTAGACAAGGATAGGATCCCTGGCATTGATATAGTTTTGA
ATGATGGAGACAAATGGATGTTTGCTGGTCATGAGGTGCATGTGATTGAT
ACGCCTGGCCATACCCGAGGTCATATTAGCTTCTACTTTCCTGGATCAGC
GGCAGTTTTTACTGGGGACACCTTGTTCAGCTTATCCTGTGGCAAGCTTT
TTGAAGGAACCCCTGGGCAGATGTTTTCTTCCCTTCAGAAGATAATGTCT
CTGCCAGATGATACAAATGTATATTGTGGTCATGAATATACGCTGAGTAA
TTCAAAATTTGCATTGTCCATAGAACCCAACAATGAGGCCCTTCAATCAT
ATGCAGCG
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