CX675011

Overview
NameCX675011
Unique NameCX675011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX675011_ssr739 microsatellite CX675011_ssr739:739..750. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig10372 contig Csv1_Contig10372:341..1195. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_RHILO (Hydroxyacylglutathione hydrolase OS=Rhizobium loti GN=gloB PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.878e-49
Identity = 99/236 (41.95%), Postives = 137/236 (58.05%), Query Frame = -1
Query:  148 DMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIPDTADDSEALGVIRQAKDNF 855
            D  +G   ++D  E  P++ A+ R     T I             L LK R+  +++G   +K +IPGID  + +G         + VI TPGHT GH+S++ P S   FT DTLF+L CG+LFE  P  M+ SL+K+ +LP  T +YCGHEYTL+N++FAL+++P N AL+  A  I  LR    PT+PTTI  E S NPFLR   P IR+ L + + A D+E    IR+ KDNF
Sbjct:   21 DPKSGQTAIIDAPEEAPILAAIKRTGWTPTMILTTHHHMDHVEANLALKERFKLRIVGPEAEKAKIPGIDETVEEGSVLHLGDERIEVIATPGHTAGHVSYHLPASKVAFTADTLFALGCGRLFECKPPVMYESLRKLAALPAATTIYCGHEYTLANARFALTVDPTNSALKERATRIEALRVDNKPTLPTTIGEELSTNPFLRWHDPAIRKHLGM-EKAGDAEVFAEIRKRKDNF 255          
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_MESSB (Hydroxyacylglutathione hydrolase OS=Mesorhizobium sp. (strain BNC1) GN=gloB PE=3 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 4.878e-49
Identity = 101/236 (42.80%), Postives = 140/236 (59.32%), Query Frame = -1
Query:  148 DMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIPDTADDSEALGVIRQAKDNF 855
            D +TG   +VD  E   +++A+ R     + +             L LK R+G  +IG   +  +IPGID  +N+GD       E  VI+TPGHT GHI+FYF  +   FT DTLF+L CG+LFE  P  M+ SL+K++ LP +T +YCGHEYT SN++FALS++P N AL+  A  I  LR +G PT+PTT+  E + NPFLR   P +R +L + + A D E    IR+ KD F
Sbjct:   21 DSETGITALVDAPEEQAILEAIKRTGWTPSLLLITHHHADHVEANLALKERFGLTIIGPAKEASKIPGIDRQVNEGDVVRVGNQEARVIETPGHTAGHITFYFAKAGIAFTADTLFALGCGRLFECKPPVMYESLKKLVELPLETVIYCGHEYTESNARFALSVDPTNSALKERAKKIEALRREGRPTLPTTLGEEMATNPFLRCHDPVLRNNLGMKNAA-DVEVFAEIRKRKDVF 255          
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_BARHE (Hydroxyacylglutathione hydrolase OS=Bartonella henselae GN=gloB PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.371e-49
Identity = 101/236 (42.80%), Postives = 140/236 (59.32%), Query Frame = -1
Query:  148 DMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIPDTADDSEALGVIRQAKDNF 855
            D  +G    +D  E+  + +AL R+N  L  I              ELK  Y A VIG   +K++I  ID  L   + ++F  H +  + TPGHT G +S+YFP    +F GDTLFSL CG+LFEGTP QM +SL+K+  LPD+T +YCGHEYT SN+ FAL+++P N+ LQ  A  +  LR+K   T+P T+  EK  NPFLR  +  +R++LR+ +   D E    IR+ KDNF
Sbjct:   19 DETSGYTAAIDAPESNAIQNALKRRNWTLQTIFLTHHHHDHVEALAELKQIYKAIVIGPEAEKEKISHIDQTLKPDESFLFGTHTILALSTPGHTLGALSYYFPQENLLFAGDTLFSLGCGRLFEGTPAQMLNSLKKLRQLPDETLLYCGHEYTKSNALFALTLDPYNQKLQQRAEDVFLLRAKNAMTLPVTLGQEKKNNPFLRWDNRTLRKTLRM-EKETDEEVFAEIRKRKDNF 253          
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_ROSDO (Hydroxyacylglutathione hydrolase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=gloB PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.202e-47
Identity = 96/236 (40.68%), Postives = 141/236 (59.75%), Query Frame = -1
Query:  148 DMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIPDTADDSEALGVIRQAKDNF 855
            D  TG   ++D  EA P++  L+ +   L+ +              ++ + + A+V G+  D  R+P +D+ L DG+ + FAGH+V V+D  GHT GHI++Y   + AVFT D+L +L CG+LFEGT  QM+ SL K+ +LP +T VY GHEYT +N++FAL+I+P+N  L S +  I   R+   PT+P+T+  E + NPFLR + P IR  L +   A DSE    IR  KD F
Sbjct:   21 DTATGQTALIDVPEAAPILKVLAERTWQLSEVWITHHHADHVQGLGDILSAHPAQVRGAARDAHRLPALDVELRDGESFDFAGHKVDVMDVSGHTVGHIAYYCADAKAVFTADSLMALGCGRLFEGTADQMWDSLSKLAALPSETQVYSGHEYTAANARFALTIDPHNPDLISRSEGITAARAAAKPTVPSTLATEAATNPFLRAADPAIRAHLNM-QHASDSEVFAEIRARKDAF 255          
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_RHORT (Hydroxyacylglutathione hydrolase OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=gloB PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.569e-47
Identity = 100/233 (42.92%), Postives = 138/233 (59.23%), Query Frame = -1
Query:  148 TGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIPDTADDSEALGVIRQAKDNF 846
            TG   V+DPS A PV+ A       +T+I              E+KA  G ++IG   D  R+PGID  + +GD+      E  VI+TPGHT GHI+++F  S+A+F GDTLFS  CG+LFEG+ GQM+ SL+K+ +LP  T V+CGHEYT  N  FAL+I+P NEAL++ A  +  LR+ G PT+P  +  E   NPFLR  S + +++  +   AD  E     R  KD+F
Sbjct:   25 TGACAVIDPSLAEPVLAAAESLGWTITHILNTHHHYDHTGGNEEIKAATGCEIIGFAGDAHRLPGIDRTVVEGDRVAIGQAEARVIETPGHTLGHIAYWFAESSALFCGDTLFSAGCGRLFEGSAGQMWDSLRKLRALPAQTLVFCGHEYTQPNITFALTIDPRNEALRARALEVDALRAAGRPTVPAFLGDEARSNPFLRADSADFQEAFGMTG-ADPVEVFARTRLKKDHF 256          
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_SYNP6 (Hydroxyacylglutathione hydrolase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=gloB PE=3 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 4.566e-47
Identity = 103/243 (42.39%), Postives = 141/243 (58.02%), Query Frame = -1
Query:  148 DMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARYG-AKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSA------AVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIPDTADDSEALGVIRQAKDNF 855
            D++     VVDP+EA PV+ AL  +   LT I               L  ++  A V  S VD+DRIPG  ++L  GD+    G    V+  PGHTRGHI++YFP  A      A+F GDTLF+  CG+LFEGTP QM  SLQ++ SLPDDT +YC HEYTL+N +FAL++EP+N  LQ     +A  R +G  TIP+ + +EK+ NPFLR     ++ ++    + D  + L  +R  KD F
Sbjct:   19 DVEQRQAAVVDPAEAEPVLAALQAEGLTLTAILNTHHHGDHVGGNRRLLRQFPEAAVSASAVDRDRIPGQTVLLEAGDRLQICGQTAEVLFVPGHTRGHIAYYFPEVAEGNPRGALFCGDTLFAGGCGRLFEGTPAQMLDSLQQLRSLPDDTAIYCAHEYTLNNLRFALTVEPDNFDLQQRYQAVAIARQQGQATIPSRLDIEKATNPFLRWDQAALQAAV---SSQDPVQTLARLRSRKDQF 258          
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_SYNJA (Hydroxyacylglutathione hydrolase OS=Synechococcus sp. (strain JA-3-3Ab) GN=gloB PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.566e-47
Identity = 101/237 (42.62%), Postives = 135/237 (56.96%), Query Frame = -1
Query:  148 DMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARYGAKVI-GSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIPDTADDSEALGVIRQAKDNF 855
            D +T T  VVDP+ A PV+D L+     L  I             L+L ARY   V+ GS  D+ RIPG  + L  G+   FAG +  V+  PGHTRGH+++YFP S  +F GDTLF+  CG+LFEGTP QM  SL ++  LP+ T V+C HEYTL+N KFAL+++ +N  LQ+    +  LR  G PT+P+TI  E+  NPFLR   P +R +       D       +R  KD F
Sbjct:   19 DPETATAAVVDPTVAEPVLDKLAELGAELVAIFNTHHHHDHVGGNLQLLARYPRAVVYGSQADRGRIPGQTVELQAGETVAFAGRQAKVLFVPGHTRGHVAYYFPESGDLFCGDTLFAGGCGRLFEGTPEQMLGSLDQLRQLPEATRVWCAHEYTLNNLKFALTVDGDNPDLQARYQQVVALRQAGSPTVPSTIGEERRTNPFLRWDQPALRAA---TGAQDPVRVFARLRGMKDQF 252          
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_SYNE7 (Hydroxyacylglutathione hydrolase OS=Synechococcus elongatus (strain PCC 7942) GN=gloB PE=3 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 4.566e-47
Identity = 103/243 (42.39%), Postives = 141/243 (58.02%), Query Frame = -1
Query:  148 DMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARYG-AKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSA------AVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIPDTADDSEALGVIRQAKDNF 855
            D++     VVDP+EA PV+ AL  +   LT I               L  ++  A V  S VD+DRIPG  ++L  GD+    G    V+  PGHTRGHI++YFP  A      A+F GDTLF+  CG+LFEGTP QM  SLQ++ SLPDDT +YC HEYTL+N +FAL++EP+N  LQ     +A  R +G  TIP+ + +EK+ NPFLR     ++ ++    + D  + L  +R  KD F
Sbjct:   19 DVEQRQAAVVDPAEAEPVLAALQAEGLTLTAILNTHHHGDHVGGNRRLLRQFPEAAVSASAVDRDRIPGQTVLLEAGDRLQICGQTAEVLFVPGHTRGHIAYYFPEVAEGNPRGALFCGDTLFAGGCGRLFEGTPAQMLDSLQQLRSLPDDTAIYCAHEYTLNNLRFALTVEPDNFDLQQRYQAVAIARQQGQATIPSRLDIEKATNPFLRWDQAALQAAV---SSQDPVQTLARLRSRKDQF 258          
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_AGRT5 (Hydroxyacylglutathione hydrolase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=gloB PE=3 SV=2)

HSP 1 Score: 187.578 bits (475), Expect = 7.788e-47
Identity = 99/236 (41.95%), Postives = 137/236 (58.05%), Query Frame = -1
Query:  148 DMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIPDTADDSEALGVIRQAKDNF 855
            D ++G    +D  E  P++ AL      LT+I             L LK ++  +V G   +   IPG+D    DGD++ FAG  V VI TPGHT GHI +Y P    +F  DTLF++ CG+LFE     M+ S QK+M+LPDDT VY GHEYTLSN++FAL+++P+N  L+  AA +   R     TIPTTI +EK  NP++R +   IR+ L + + A D++    IR  KDNF
Sbjct:   22 DPESGATAAIDAPEEGPILRALDGHGWKLTHIFTTHHHQDHVEANLVLKDKFRCEVHGPYDEAIAIPGLDRSQADGDEFEFAGRRVQVIATPGHTAGHICYYLPDDGLLFAADTLFAMGCGRLFERPAADMWHSFQKLMALPDDTRVYFGHEYTLSNARFALTVDPDNAVLRERAARVETARQANEFTIPTTIGLEKQTNPYMRVADAGIRRHLGL-EGAADADVFAEIRTRKDNF 256          
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_RHOP5 (Hydroxyacylglutathione hydrolase OS=Rhodopseudomonas palustris (strain BisA53) GN=gloB PE=3 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 2.959e-46
Identity = 99/234 (42.31%), Postives = 133/234 (56.84%), Query Frame = -1
Query:  154 DMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIPDTADDSEALGVIRQAKD 855
            D  TG    VD  EA P+I AL+R+   LT I              ELK +Y  +V+       RIP +D+ +  GD     G    V++TPGHT  H+++ F    AVF GDTLFS+ CG++FEGT   M+ SL K+  LPDD  +YCGHEYT +N KFAL +EP+N ALQ+ AA +  LR+ G PTIPT +  EK+ N FLR   P +  S+R+   AD       +R+ K+
Sbjct:   21 DPATGATASVDAPEAAPIIAALAREGWTLTDILVTHHHGDHVGGVAELKQKYRCRVVAPHDRNGRIPEVDLRVAQGDVVKVGGLLARVLETPGHTLDHLAYVFDDDKAVFAGDTLFSIGCGRVFEGTYPMMWDSLLKLRVLPDDMRLYCGHEYTAANVKFALGVEPDNPALQARAAQVTALRAAGQPTIPTLLGEEKAANVFLRADEPSVAASVRLKG-ADPVAVFTELRERKN 253          
The following BLAST results are available for this feature:
BLAST of CX675011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 290
Match NameE-valueIdentityDescription
GLO2_RHILO4.878e-4941.95Hydroxyacylglutathione hydrolase OS=Rhizobium loti... [more]
GLO2_MESSB4.878e-4942.80Hydroxyacylglutathione hydrolase OS=Mesorhizobium ... [more]
GLO2_BARHE6.371e-4942.80Hydroxyacylglutathione hydrolase OS=Bartonella hen... [more]
GLO2_ROSDO1.202e-4740.68Hydroxyacylglutathione hydrolase OS=Roseobacter de... [more]
GLO2_RHORT1.569e-4742.92Hydroxyacylglutathione hydrolase OS=Rhodospirillum... [more]
GLO2_SYNP64.566e-4742.39Hydroxyacylglutathione hydrolase OS=Synechococcus ... [more]
GLO2_SYNJA4.566e-4742.62Hydroxyacylglutathione hydrolase OS=Synechococcus ... [more]
GLO2_SYNE74.566e-4742.39Hydroxyacylglutathione hydrolase OS=Synechococcus ... [more]
GLO2_AGRT57.788e-4741.95Hydroxyacylglutathione hydrolase OS=Agrobacterium ... [more]
GLO2_RHOP52.959e-4642.31Hydroxyacylglutathione hydrolase OS=Rhodopseudomon... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_59B01_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-59B01-C1-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675011 ID=CX675011; Name=CX675011; organism=Citrus sinensis; type=EST; length=855bp
TTTTTTTTTTTTTTTTTGGGACAAATGACAAAGTAAAAATTAAAATTGAA
AACAAAAAAAAGGTTAAAATGTATACATTGGTGGTTTTATTTCATATTGG
CACCAGCTACTCTCTGTACACAAACAATAGTAGTTAAAACGATCCTAGAA
GTTATCCTTTGCTTGACGAATGACACCTAAGGCTTCTGAATCATCTGCAG
TGTCTGGAATGCGCAATGACTGCCGGATTTCTGGACTTGACGTGCGAAGA
AATGGATTACATGACTTCTCCATCTTTATTGTTGTTGGGATCGTGGGCAC
ACCCTTGCTTCGAAGTTGGGCTATGTGCGCTGCATATGATTGAAGGGCCT
CATTGTTGGGTTCTATGGACAATGCAAATTTTGAATTACTCAGCGTATAT
TCATGACCACAATATACATTTGTATCATCTGGCAGAGACATTATCTTCTG
AAGGGAAGAAAACATCTGCCCAGGGGTTCCTTCAAAAAGCTTGCCACAGG
ATAAGCTGAACAAGGTGTCCCCAGTAAAAACTGCCGCTGATCCAGGAAAG
TAGAAGCTAATATGACCTCGGGTATGGCCAGGCGTATCAATCACATGCAC
CTCATGACCAGCAAACATCCATTTGTCTCCATCATTCAAAACTATATCAA
TGCCAGGGATCCTATCCTTGTCTACTCCTGAACCAATCACCTTTGCACCG
TACCTTGCTTTTAGCTCCAAATTACCACCGGTGTGATCATGATGATGATG
TGTATTTAGAATGTAAGTCAGATTTCGGTTTTTCCTACTCAAAGCATCTA
TCACAGGAACAGCTTCAGAAGGATCAACAACTCCGACAGTACCTGTGTCC
ATGTC
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