CX675011

Overview
NameCX675011
Unique NameCX675011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX675011_ssr739 microsatellite CX675011_ssr739:739..750. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig10372 contig Csv1_Contig10372:341..1195. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_RHOBL (Hydroxyacylglutathione hydrolase OS=Rhodopseudomonas blastica GN=gloB PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 8.611e-46
Identity = 95/236 (40.25%), Postives = 138/236 (58.47%), Query Frame = -1
Query:  148 DMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIPDTADDSEALGVIRQAKDNF 855
            D  +G   +VD  EA PV+ AL+ +   LT I              E+ A  GA+V G+  D  R+P +D  L +GD+         VID PGHTRGHI+F+FPGSA  FTGD+L +  CG+LFEGTP +M++SL K+ +LP +T +  GH+Y   N +FAL++EP N AL S    ++++R +G   +P T+  E + NPFLR   P+++ ++ +P  A D+     IR  KD F
Sbjct:   21 DAASGRTALVDAPEAAPVLSALAAQGWRLTDILLTHHHDDHIQAVPEIHAATGARVHGAAADAHRLPPLDHALREGDRVAIGAESAVVIDVPGHTRGHIAFHFPGSALAFTGDSLMAAGCGRLFEGTPAEMWASLSKLAALPPETLICSGHDYLDGNLRFALALEPGNPALISRQGRLSEMRREGRLPMPWTLAEELATNPFLRAPLPQMKAAVGLPQ-ASDTVVFAEIRARKDLF 255          
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_RHOS5 (Hydroxyacylglutathione hydrolase OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=gloB PE=3 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.469e-45
Identity = 94/236 (39.83%), Postives = 138/236 (58.47%), Query Frame = -1
Query:  148 DMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIPDTADDSEALGVIRQAKDNF 855
            D  +G   VVD  EA PV+ AL+ +N  LT I               L+   GA+V G+  D  R+P +D+ L +GD+      +  V++ PGHT GHI+F+F  S   FTGD+L ++ CG+LFEGTP  M+ SL+K+ +LP DT +  GHEYT +N++FA ++EP N  L      IA  R +G PT+P+ +  E + NPFLR     ++ ++ + D A+D+E    IR+ KDNF
Sbjct:   21 DAASGETAVVDVPEAGPVMAALAERNWRLTQILLTHHHGDHVAGVAALREATGARVAGAAADAHRLPPLDLALAEGDRVRIGSEDGTVLEVPGHTVGHIAFHFADSGLAFTGDSLMAMGCGRLFEGTPRMMWQSLRKLSALPADTLICSGHEYTQANARFACTLEPENPVLIFRVGSIAAARKEGRPTVPSQLSDEIATNPFLRAGEAALKAAVGMAD-AEDAEVFAEIRRRKDNF 255          
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_SYNJB (Hydroxyacylglutathione hydrolase OS=Synechococcus sp. GN=gloB PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.505e-45
Identity = 99/235 (42.13%), Postives = 134/235 (57.02%), Query Frame = -1
Query:  148 DTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARYG-AKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIPDTADDSEALGVIRQAKDNF 849
            DT T  VVDP+ A PV++ L+     L  I              +L  RY  A+V GS VD+ RIPG  + L  G+   FAG    V+  PGHTRGHI++YF  S  +F GDTLF+  CG+LFEGTP QM  SL ++  LP+ T V+C HEYTL+N +FAL+++ +N  LQ+    +A LR  G PT+P+TI  E+  NPFLR   P ++ +  + D          +R  KD F
Sbjct:   21 DTATAAVVDPAVAEPVLEKLAELGAELVAIFNTHHHHDHVGGNRQLLERYPRARVYGSQVDRGRIPGQTVELKAGETVEFAGRLAKVLFVPGHTRGHIAYYFSESGDLFCGDTLFAGGCGRLFEGTPEQMVGSLDQLRQLPEATRVWCAHEYTLNNLRFALTVDGDNPDLQARYQQVAALRQTGSPTVPSTIGEERRTNPFLRWDQPALQAATGLQDPV---RVFARLRGMKDQF 252          
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_BARQU (Hydroxyacylglutathione hydrolase OS=Bartonella quintana GN=gloB PE=3 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 2.505e-45
Identity = 94/236 (39.83%), Postives = 134/236 (56.78%), Query Frame = -1
Query:  148 DMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIPDTADDSEALGVIRQAKDNF 855
            D  +G    +D  E+  +  AL R+N  L  I              ELK  Y A VIG   +K++I  +D  L   +   F  H +  + TPGHT G +S+YFP    +F+GDTLFSL CG+LFEGTP QM +S +K+  LPD+T +YCGHEYT +N+ FAL+++ +N+ L      +  LR+K   T+P T+  EK+ NPFLR     +R++L + +   D E    IR+ KDNF
Sbjct:   19 DERSGYTAAIDAPESKAICSALKRRNWTLQTIFVTHHHHDHIEALAELKQIYKAVVIGPEAEKEKIGHLDQALQPDESLFFGTHTLLALSTPGHTLGSLSYYFPQENLLFSGDTLFSLGCGRLFEGTPAQMLNSFKKLRQLPDETLLYCGHEYTKTNALFALTLDSHNQKLHQRVEDVFLLRAKNAMTLPVTLGQEKATNPFLRWDDRTLRKNLAM-EKETDEEVFAEIRKRKDNF 253          
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_SYNY3 (Hydroxyacylglutathione hydrolase OS=Synechocystis sp. (strain PCC 6803) GN=gloB PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 5.581e-45
Identity = 102/242 (42.15%), Postives = 135/242 (55.79%), Query Frame = -1
Query:  148 DMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARY-GAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYF-PGSAA----VFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIPDTADDSEALGVIRQAKDNF 855
            D       VVDP+EA PV+D L     +L  I              EL A+Y   +V G   D+ RIPG  + L DGD+  FA  E  V   PGHTRGHI++YF PGS      +F GDT+F+  CG+LFEGTP QM  S+ K+  LPD T ++C HEYTL N KFAL+++P+N+ LQ     +   R +G  TIP+ +  EK  NPFLR  +P I+  + + + A      G +R  KDNF
Sbjct:   19 DRQRNQAAVVDPAEAKPVLDCLETLGADLVTIYNTHHHGDHVGANRELLAKYPNLEVYGGVEDQGRIPGQTVFLRDGDRLSFADREATVYFVPGHTRGHIAYYFAPGSGETIGDLFCGDTIFAGGCGRLFEGTPAQMVQSIGKLRQLPDQTRLWCAHEYTLGNLKFALTVDPSNKDLQERFQTVQGDRQRGQATIPSWLGTEKRTNPFLRWDNPAIQARVGMTEPA---RVFGKLRGMKDNF 257          
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_PHOPR (Hydroxyacylglutathione hydrolase OS=Photobacterium profundum GN=gloB PE=3 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 5.581e-45
Identity = 100/232 (43.10%), Postives = 136/232 (58.62%), Query Frame = -1
Query:  148 VVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARY-GAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIPDTA-DDS--EALGVIRQAKDNF 831
            VVDP +A PV+  L  ++  L  I              ELK  Y    V+G     + IPGI   + DGD+    G    V+  PGHT GH+++   G   +F GDTLFS+ CG+LFEGTP QMF SL+K+ +LPD+T +YC HEYT SN  FAL  E +N  LQ Y   ++++R++G+ TIP+T++ EK  NPFLR   P I++S  + D A DDS  E    +R+ KDNF
Sbjct:   27 VVDPGDATPVLKVLEEQSLTLDAILITHHHHDHIGGISELKRHYPNLNVVGPA--SEPIPGISQSVEDGDQVELFGERFMVLGVPGHTLGHVAYV--GDGKLFCGDTLFSVGCGRLFEGTPAQMFQSLKKLAALPDETEIYCAHEYTSSNLAFALVAEQDNPHLQRYREDVSRMRAQGISTIPSTLRQEKLVNPFLRCEQPSIKKS--VADKAFDDSDLETFAALRRWKDNF 252          
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_RHOPS (Hydroxyacylglutathione hydrolase OS=Rhodopseudomonas palustris (strain BisB5) GN=gloB PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 7.289e-45
Identity = 95/235 (40.43%), Postives = 133/235 (56.60%), Query Frame = -1
Query:  151 DMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIPDTADDSEALGVIRQAKDN 855
            D  +G    +D  EA P+I AL ++   LT I              ELK +Y  +V+       +I  ID+ + +GD     G    V++TPGHT  HIS+ F    A+F  DTLFS+ CG++FEGT   M+ SL K+  LPDD  +YCGHEYT SN KFAL+IEP+N ALQ+ A  + Q R+ G PTIP T+  EK  N FLR   P +  ++ +P  +  ++  G +R+ K+N
Sbjct:   21 DPSSGATASIDAPEAAPLIAALEKEGWKLTDILVTHHHGDHVGGVAELKKKYQCRVVAPHDANAKIADIDLRVEEGDVVRVGGLSARVLETPGHTLDHISYVFDDDRALFAADTLFSIGCGRVFEGTYPMMWESLLKLRELPDDFKLYCGHEYTASNVKFALTIEPDNAALQARAKQVEQQRAAGQPTIPVTLGEEKQANLFLRADVPSVAAAVGLPGES-AADVFGELRERKNN 254          
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_RHOS1 (Hydroxyacylglutathione hydrolase OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=gloB PE=3 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.243e-44
Identity = 94/236 (39.83%), Postives = 138/236 (58.47%), Query Frame = -1
Query:  148 DMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIPDTADDSEALGVIRQAKDNF 855
            D  TG   VVD  EA PV+ AL  +  +L+ I              EL+A  GA+V G+  D  R+P +D+ L +GD       E  VI+ PGHT GHI+F+FP S+  FTGD+L ++ CG+LFEGT   M+ SL+K+ +LP +T +  GHEY  SN++FA ++EP++  L      IA  R +G PT+P+ +  E + NPFLR     ++ ++ + D A+D+E    IR+ KD F
Sbjct:   21 DAGTGETSVVDVPEAGPVLKALEERGWHLSQILLTHHHSDHVAGVEELRAATGARVAGAAADAHRLPPLDLELAEGDLVRVGASEGRVIEVPGHTVGHIAFHFPDSSLAFTGDSLMAMGCGRLFEGTAEAMWQSLRKLSALPPETMICSGHEYAASNARFAATLEPDSPMLIFRVGSIAAARKEGRPTVPSHLSDEIATNPFLRAGEASLKAAVGMVD-AEDAEVFAEIRRRKDKF 255          
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_RHOS4 (Hydroxyacylglutathione hydrolase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=gloB PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.624e-44
Identity = 93/236 (39.41%), Postives = 138/236 (58.47%), Query Frame = -1
Query:  148 DMDTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIPDTADDSEALGVIRQAKDNF 855
            D  TG   VVD  EA P++ AL  +  +L+ I              EL+A  GA+V G+  D  R+P +D+ L +GD       E  VI+ PGHT GHI+F+FP S+  FTGD+L ++ CG+LFEGT   M+ SL+K+ +LP +T +  GHEY  SN++FA ++EP++  L      IA  R +G PT+P+ +  E + NPFLR     ++ ++ + D A+D+E    IR+ KD F
Sbjct:   21 DAGTGETSVVDVPEAGPILKALEERGWHLSQILLTHHHSDHVAGVEELRAATGARVAGAAADAHRLPPLDLELAEGDLVRVGASEGRVIEVPGHTVGHIAFHFPDSSLAFTGDSLMAMGCGRLFEGTAEAMWQSLRKLSALPPETMICSGHEYAASNARFAATLEPDSPMLIFRVGSIAAARKEGRPTVPSHLSDEIATNPFLRAGEASLKAAVGMVD-AEDAEVFAEIRRRKDKF 255          
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_MICAN (Hydroxyacylglutathione hydrolase OS=Microcystis aeruginosa (strain NIES-843) GN=gloB PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.624e-44
Identity = 101/234 (43.16%), Postives = 132/234 (56.41%), Query Frame = -1
Query:  148 VVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARYGAK-VIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFP-----GSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIPDTADDSEALGVIRQAKDNF 831
            VVDP+E  PV   L     +L  I               L  RY    V G   D+ RIPG  + L +GD+  FAG    V   PGHTR HI++YFP         +F GDTLFS  CG+LFEGTPGQM +SL K+ SLPD T V+C HEYTL+N KFAL+++PNN ALQ     + + R++ +PTIP  +  EK  NPFLR  SP +  ++   D+++  +    +R  KDNF
Sbjct:   27 VVDPAEPEPVFRRLEALQVDLVAIFNTHHHGDHVGANQALINRYPHLCVYGGKEDRGRIPGQQLFLEEGDRVEFAGRWAEVFFVPGHTRAHIAYYFPPVNPGDYGELFCGDTLFSGGCGRLFEGTPGQMVASLTKLRSLPDQTRVWCAHEYTLNNLKFALTVDPNNAALQQRYREVEKHRAEDLPTIPAILGTEKLTNPFLRWDSPALAMTM---DSSEPVQVFARLRGKKDNF 257          
The following BLAST results are available for this feature:
BLAST of CX675011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 290
Match NameE-valueIdentityDescription
GLO2_RHOBL8.611e-4640.25Hydroxyacylglutathione hydrolase OS=Rhodopseudomon... [more]
GLO2_RHOS51.469e-4539.83Hydroxyacylglutathione hydrolase OS=Rhodobacter sp... [more]
GLO2_SYNJB2.505e-4542.13Hydroxyacylglutathione hydrolase OS=Synechococcus ... [more]
GLO2_BARQU2.505e-4539.83Hydroxyacylglutathione hydrolase OS=Bartonella qui... [more]
GLO2_SYNY35.581e-4542.15Hydroxyacylglutathione hydrolase OS=Synechocystis ... [more]
GLO2_PHOPR5.581e-4543.10Hydroxyacylglutathione hydrolase OS=Photobacterium... [more]
GLO2_RHOPS7.289e-4540.43Hydroxyacylglutathione hydrolase OS=Rhodopseudomon... [more]
GLO2_RHOS11.243e-4439.83Hydroxyacylglutathione hydrolase OS=Rhodobacter sp... [more]
GLO2_RHOS41.624e-4439.41Hydroxyacylglutathione hydrolase OS=Rhodobacter sp... [more]
GLO2_MICAN1.624e-4443.16Hydroxyacylglutathione hydrolase OS=Microcystis ae... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_59B01_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-59B01-C1-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675011 ID=CX675011; Name=CX675011; organism=Citrus sinensis; type=EST; length=855bp
TTTTTTTTTTTTTTTTTGGGACAAATGACAAAGTAAAAATTAAAATTGAA
AACAAAAAAAAGGTTAAAATGTATACATTGGTGGTTTTATTTCATATTGG
CACCAGCTACTCTCTGTACACAAACAATAGTAGTTAAAACGATCCTAGAA
GTTATCCTTTGCTTGACGAATGACACCTAAGGCTTCTGAATCATCTGCAG
TGTCTGGAATGCGCAATGACTGCCGGATTTCTGGACTTGACGTGCGAAGA
AATGGATTACATGACTTCTCCATCTTTATTGTTGTTGGGATCGTGGGCAC
ACCCTTGCTTCGAAGTTGGGCTATGTGCGCTGCATATGATTGAAGGGCCT
CATTGTTGGGTTCTATGGACAATGCAAATTTTGAATTACTCAGCGTATAT
TCATGACCACAATATACATTTGTATCATCTGGCAGAGACATTATCTTCTG
AAGGGAAGAAAACATCTGCCCAGGGGTTCCTTCAAAAAGCTTGCCACAGG
ATAAGCTGAACAAGGTGTCCCCAGTAAAAACTGCCGCTGATCCAGGAAAG
TAGAAGCTAATATGACCTCGGGTATGGCCAGGCGTATCAATCACATGCAC
CTCATGACCAGCAAACATCCATTTGTCTCCATCATTCAAAACTATATCAA
TGCCAGGGATCCTATCCTTGTCTACTCCTGAACCAATCACCTTTGCACCG
TACCTTGCTTTTAGCTCCAAATTACCACCGGTGTGATCATGATGATGATG
TGTATTTAGAATGTAAGTCAGATTTCGGTTTTTCCTACTCAAAGCATCTA
TCACAGGAACAGCTTCAGAAGGATCAACAACTCCGACAGTACCTGTGTCC
ATGTC
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