CX675011

Overview
NameCX675011
Unique NameCX675011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length855
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CX675011_ssr739 microsatellite CX675011_ssr739:739..750. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig10372 contig Csv1_Contig10372:341..1195. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_CUPTR (Hydroxyacylglutathione hydrolase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=gloB PE=3 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 1.019e-38
Identity = 97/246 (39.43%), Postives = 128/246 (52.03%), Query Frame = -1
Query:  148 DTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARYGAKVIGS-----GVDKDRIPGIDIVLNDGDKWMFAGHEV--HVIDTPGHTRGHISFYFP---GSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRI--PDTADDSEALGVIRQAKDNF 849
            D     VVDP EA PV   L++    L  I               L A +     G      G   +RI G    L +GD        +   V+D PGHT GHI++         A+F GDTLF+  CG+LFEGTP QM +SL K+ +LP DT VYC HEYT SN +FA ++EP N AL ++ A +  LR+   PT+PTTI  E+  NPFLR+  P +R ++       ADD++  G +R  KDNF
Sbjct:   20 DGHCAAVVDPGEAAPVERFLAQSGLALGAIVITHHHGDHQGGVAGLLAAHPRAPSGGPLPVLGPAGERIGGRTQALREGDVATLEAPALTLRVLDVPGHTAGHIAYVADLGEAGPALFCGDTLFASGCGRLFEGTPAQMLASLDKLAALPGDTRVYCAHEYTRSNVRFARAVEPGNAALAAWEARVEALRATNQPTLPTTIAHERQVNPFLRSREPAVRAAVSAHGGTAADDAQNFGALRGWKDNF 265          
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_SHEPA (Hydroxyacylglutathione hydrolase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=gloB PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.966e-38
Identity = 93/239 (38.91%), Postives = 132/239 (55.23%), Query Frame = -1
Query:  148 DTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARYGAKVIGSGVDKDRIPGID--IVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRI---PDTADDSEALGVIRQAKDNF 849
            ++  + VVDP +   VID L +  + L  I              +L  R+GA++   G   + I G++  IV N       AG    VI  PGHT GHI++       +F GDTLFS  CG++FEG+  QM+ SL ++  LPD+T V C HEYT++N  FA  +EPNN AL  Y      LR++ +PT+P++I  EK+ NPFLR+ S EI QSL I       +  ++  ++RQ KDNF
Sbjct:   27 ESSGIYVVDPGDGQVVIDYLIQTGQALLGILITHHHHDHTGGIEQLIRRFGAQIAVYGPQSENIIGVNHPIVANGDISLTNAGLNAKVIQLPGHTLGHIAYLIED--VLFCGDTLFSAGCGRIFEGSAEQMYQSLSELGQLPDNTKVCCAHEYTIANLAFANRVEPNNAALIDYTKKAQALRAQNLPTLPSSIGQEKAINPFLRSDSEEICQSLSIQFQQPINNPLQSFSLLRQWKDNF 263          
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_PSEPF (Hydroxyacylglutathione hydrolase OS=Pseudomonas fluorescens (strain Pf0-1) GN=gloB PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.966e-38
Identity = 96/240 (40.00%), Postives = 124/240 (51.67%), Query Frame = -1
Query:  148 DMDTGTVGVVDPSEAVPVIDAL-SRKNRNLTYIXXXXXXXXXXXXXLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSL---RIPDTADDSEALGVIRQAKDNF 855
            D  T    VVDP +A PV   L +     L  I               LK   GA V G     + IPG D+ L D D     G +  V   PGHT GHI++Y  G   +F GDTLF+  CG+LFEGTP QM  SL ++ +LP+DT VYC HEYTLSN KFA ++EP+N  + +    + + R  GV T+P+T+ +EK  NPFLRT    + Q +     P     SE    +R  KD F
Sbjct:   20 DHATQRCAVVDPGDAAPVQAWLDAHPGWVLGDILITHHHHDHVGGVETLKKATGATVYGPA--SENIPGRDVALKDNDTVRVLGWDFDVYAVPGHTLGHIAYYHHG--LLFCGDTLFAAGCGRLFEGTPQQMHQSLSRLAALPEDTLVYCTHEYTLSNLKFAAAVEPDNRDIAARLEKVTRQRENGVMTLPSTLALEKLTNPFLRTGEILVTQKVDERNGPQNRAPSEVFAALRAWKDTF 255          
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_METFK (Hydroxyacylglutathione hydrolase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=gloB PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.874e-38
Identity = 88/228 (38.60%), Postives = 127/228 (55.70%), Query Frame = -1
Query:  148 VVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIPDTADDSEALGVIRQAKDNF 831
            VVDP +A PV++ L  +   L  I              EL     A+V     ++   P   +   D          + V+D PGHT GH+++Y  G   +F+GDTLF   CG+LFEGTPGQM+SSLQ++  LP +T VYCGHEYT  N  FALS+EP++EAL S     A LR++G+P++P+++ +E + NPFLR   P I  + +   T D       IR+ +++F
Sbjct:   26 VVDPGDAHPVLEILDARGLQLRAILVTHHHQDHTGGVEELIQATSAQVFAPAKEQFSFPHHPVTAGDRLDIPGIALSLSVLDVPGHTVGHVAYY--GDGMLFSGDTLFGAGCGRLFEGTPGQMYSSLQQLAQLPVNTRVYCGHEYTERNLAFALSLEPHHEALLSRREATAALRAQGLPSLPSSMALELATNPFLRCHEPGIIAASKSAAT-DPVSVFAAIREMRNHF 250          
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_XANCP (Hydroxyacylglutathione hydrolase OS=Xanthomonas campestris pv. campestris GN=gloB PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.060e-38
Identity = 88/235 (37.45%), Postives = 127/235 (54.04%), Query Frame = -1
Query:  148 GTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIP---DTADDSEALGVIRQAKDNF 843
            G   +VDP +A PV++A  R+                     EL+  + A  +  G D +R+P     +  GD     G +  V++ PGHTR H+++   G   +F+GDTLFSL CG++FEGTP QMF +LQ++ SLP +T V CGHEYTL+N+ FAL ++P N ALQ        +R    PT+P ++K E + NPFLR  +PEIR +           D +    +R+ KD F
Sbjct:   22 GRAVIVDPGQAAPVLEAAQREGFTPVAALLTHHHADHIGGVAELQQHFPALEL-YGPDDERMPSATRHVAHGDTVTALGIDFAVLEVPGHTRSHVAYV--GDGHLFSGDTLFSLGCGRMFEGTPPQMFDALQRLASLPGETLVCCGHEYTLANAAFALHVDPTNAALQRRQQEAQAMRHAARPTLPISLKSELATNPFLRLHTPEIRAAAAAHASISITSDVDVFAELRRWKDAF 253          
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_XANCB (Hydroxyacylglutathione hydrolase OS=Xanthomonas campestris pv. campestris (strain B100) GN=gloB PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.060e-38
Identity = 88/235 (37.45%), Postives = 127/235 (54.04%), Query Frame = -1
Query:  148 GTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIP---DTADDSEALGVIRQAKDNF 843
            G   +VDP +A PV++A  R+                     EL+  + A  +  G D +R+P     +  GD     G +  V++ PGHTR H+++   G   +F+GDTLFSL CG++FEGTP QMF +LQ++ SLP +T V CGHEYTL+N+ FAL ++P N ALQ        +R    PT+P ++K E + NPFLR  +PEIR +           D +    +R+ KD F
Sbjct:   22 GRAVIVDPGQAAPVLEAAQREGFTPVAALLTHHHADHIGGVAELQQHFPALEL-YGPDDERMPSATRHVAHGDTVTALGIDFAVLEVPGHTRSHVAYV--GDGHLFSGDTLFSLGCGRMFEGTPPQMFDALQRLASLPGETLVCCGHEYTLANAAFALHVDPTNAALQRRQQEAQAMRHAARPTLPISLKSELATNPFLRLHTPEIRAAAAAHASISITSDVDVFAELRRWKDAF 253          
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_XANC8 (Hydroxyacylglutathione hydrolase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=gloB PE=3 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 5.060e-38
Identity = 88/235 (37.45%), Postives = 127/235 (54.04%), Query Frame = -1
Query:  148 GTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIP---DTADDSEALGVIRQAKDNF 843
            G   +VDP +A PV++A  R+                     EL+  + A  +  G D +R+P     +  GD     G +  V++ PGHTR H+++   G   +F+GDTLFSL CG++FEGTP QMF +LQ++ SLP +T V CGHEYTL+N+ FAL ++P N ALQ        +R    PT+P ++K E + NPFLR  +PEIR +           D +    +R+ KD F
Sbjct:   22 GRAVIVDPGQAAPVLEAAQREGFTPVAALLTHHHADHIGGVAELQQHFPALEL-YGPDDERMPSATRHVAHGDTVTALGIDFAVLEVPGHTRSHVAYV--GDGHLFSGDTLFSLGCGRMFEGTPPQMFDALQRLASLPGETLVCCGHEYTLANAAFALHVDPTNAALQRRQQEAQAMRHAARPTLPISLKSELATNPFLRLHTPEIRAAAAAHASISITSDVDVFAELRRWKDAF 253          
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_PSEF5 (Hydroxyacylglutathione hydrolase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=gloB PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.608e-38
Identity = 92/232 (39.66%), Postives = 123/232 (53.02%), Query Frame = -1
Query:  148 VVDPSEAVPVIDALSRK-NRNLTYIXXXXXXXXXXXXXLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSL---RIPDTADDSEALGVIRQAKDNF 831
            VVDP +A PV+  L +     L+ I               LK    A V G    +++IP  DI L D  +    G E  V   PGHT GHI++Y  G   +F GDTLF+  CG+LFEGTP QM  SL ++ +LPDDT +YC HEYTLSN +FA ++EP N  +    A + Q+R +G  T+P+T+ +EK  NPFLRT    ++Q        D    S     +R  KD F
Sbjct:   28 VVDPGDAAPVLAWLEQHPGWVLSDILITHHHHDHVGGVERLKQHSAATVHGPA--REKIPARDIGLEDNQRVSILGWEFEVFAVPGHTLGHIAYYHHG--LLFCGDTLFAAGCGRLFEGTPEQMHHSLGRLAALPDDTLIYCTHEYTLSNLRFAQAVEPANPDIAERLAKVTQMREQGRMTLPSTLALEKLTNPFLRTGETSVKQKADERNGQDNQSQSAVFAALRAWKDKF 255          
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_ECO81 (Hydroxyacylglutathione hydrolase OS=Escherichia coli O81 (strain ED1a) GN=gloB PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.608e-38
Identity = 90/235 (38.30%), Postives = 128/235 (54.47%), Query Frame = -1
Query:  148 DTGTVGVVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARYGAKVIGSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPEIRQSLRIPDTADD-SEALGVIRQAKDNF 849
            + G   +VDP +A PV++A+S  N     I              EL  ++  +++  G  + +  G   V+ DG+     GHE  VI TPGHT GHI ++      +F GDTLFS  CG+LFEGTP QM+ SL+K+ +LPDDT V C HEYTLSN KFALSI P++ ++  Y   + +LR+K   T+P  +K E+  N FLRT + ++   +          E    +R  KD F
Sbjct:   20 EAGRCLIVDPGDAEPVLNAISANNWQPEAIFLTHHHHDHVGGVKELVEKF-PQIVVYGPQETQDKGTTQVVKDGETAFVLGHEFSVIATPGHTLGHICYF--SKPYLFCGDTLFSGGCGRLFEGTPSQMYQSLKKLSALPDDTLVCCAHEYTLSNMKFALSILPHDLSINDYYRKVKELRAKNQITLPVILKNERQINVFLRTENIDLINVINEETLLQQPEERFAWLRSKKDRF 251          
BLAST of CX675011 vs. ExPASy Swiss-Prot
Match: GLO2_CITK8 (Hydroxyacylglutathione hydrolase OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=gloB PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 6.608e-38
Identity = 91/230 (39.57%), Postives = 125/230 (54.35%), Query Frame = -1
Query:  148 VVDPSEAVPVIDALSRKNRNLTYIXXXXXXXXXXXXXLELKARYGAKVI-GSGVDKDRIPGIDIVLNDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSAAVFTGDTLFSLSCGKLFEGTPGQMFSSLQKIMSLPDDTNVYCGHEYTLSNSKFALSIEPNNEALQSYAAHIAQLRSKGVPTIPTTIKMEKSCNPFLRTSSPE-IRQSLRIPDTADDSEALGVIRQAKDNF 831
            +VDP EA PV++A+  KN     I              EL   +   V+ G    +D+  G   V+ DGD  +  GHE  +  TPGHT GHI ++      +F GDTLFS  CG+LFEGT  QM+ SL+KI +LPDDT + C HEYTL+N KFALSI P++  +  Y   + +LR+K   T+P  +K E+  N FLRT  P+ I +  +        E    +R  KD+F
Sbjct:   26 IVDPGEAAPVLNAIKEKNWQPEAIFLTHHHHDHVGGVKELLQHFPHVVVYGPAETQDK--GTTRVVKDGDSALVLGHEFSIFATPGHTLGHICYF--SHPYLFCGDTLFSGGCGRLFEGTASQMYQSLKKISALPDDTLICCAHEYTLANMKFALSILPHDSFINEYYRKVNELRAKNQITLPVILKNERKNNIFLRTEDPDLINEINKETKLQQPEERFAWLRSKKDSF 251          
The following BLAST results are available for this feature:
BLAST of CX675011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 290
Match NameE-valueIdentityDescription
GLO2_CUPTR1.019e-3839.43Hydroxyacylglutathione hydrolase OS=Cupriavidus ta... [more]
GLO2_SHEPA2.966e-3838.91Hydroxyacylglutathione hydrolase OS=Shewanella pea... [more]
GLO2_PSEPF2.966e-3840.00Hydroxyacylglutathione hydrolase OS=Pseudomonas fl... [more]
GLO2_METFK3.874e-3838.60Hydroxyacylglutathione hydrolase OS=Methylobacillu... [more]
GLO2_XANCP5.060e-3837.45Hydroxyacylglutathione hydrolase OS=Xanthomonas ca... [more]
GLO2_XANCB5.060e-3837.45Hydroxyacylglutathione hydrolase OS=Xanthomonas ca... [more]
GLO2_XANC85.060e-3837.45Hydroxyacylglutathione hydrolase OS=Xanthomonas ca... [more]
GLO2_PSEF56.608e-3839.66Hydroxyacylglutathione hydrolase OS=Pseudomonas fl... [more]
GLO2_ECO816.608e-3838.30Hydroxyacylglutathione hydrolase OS=Escherichia co... [more]
GLO2_CITK86.608e-3839.57Hydroxyacylglutathione hydrolase OS=Citrobacter ko... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_59B01_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-59B01-C1-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675011 ID=CX675011; Name=CX675011; organism=Citrus sinensis; type=EST; length=855bp
TTTTTTTTTTTTTTTTTGGGACAAATGACAAAGTAAAAATTAAAATTGAA
AACAAAAAAAAGGTTAAAATGTATACATTGGTGGTTTTATTTCATATTGG
CACCAGCTACTCTCTGTACACAAACAATAGTAGTTAAAACGATCCTAGAA
GTTATCCTTTGCTTGACGAATGACACCTAAGGCTTCTGAATCATCTGCAG
TGTCTGGAATGCGCAATGACTGCCGGATTTCTGGACTTGACGTGCGAAGA
AATGGATTACATGACTTCTCCATCTTTATTGTTGTTGGGATCGTGGGCAC
ACCCTTGCTTCGAAGTTGGGCTATGTGCGCTGCATATGATTGAAGGGCCT
CATTGTTGGGTTCTATGGACAATGCAAATTTTGAATTACTCAGCGTATAT
TCATGACCACAATATACATTTGTATCATCTGGCAGAGACATTATCTTCTG
AAGGGAAGAAAACATCTGCCCAGGGGTTCCTTCAAAAAGCTTGCCACAGG
ATAAGCTGAACAAGGTGTCCCCAGTAAAAACTGCCGCTGATCCAGGAAAG
TAGAAGCTAATATGACCTCGGGTATGGCCAGGCGTATCAATCACATGCAC
CTCATGACCAGCAAACATCCATTTGTCTCCATCATTCAAAACTATATCAA
TGCCAGGGATCCTATCCTTGTCTACTCCTGAACCAATCACCTTTGCACCG
TACCTTGCTTTTAGCTCCAAATTACCACCGGTGTGATCATGATGATGATG
TGTATTTAGAATGTAAGTCAGATTTCGGTTTTTCCTACTCAAAGCATCTA
TCACAGGAACAGCTTCAGAAGGATCAACAACTCCGACAGTACCTGTGTCC
ATGTC
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