CN186445
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186445 vs. ExPASy Swiss-Prot
Match: SEC22_YARLI (Protein transport protein SEC22 OS=Yarrowia lipolytica GN=SEC22 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.661e-12 Identity = 40/183 (21.86%), Postives = 88/183 (48.09%), Query Frame = 1 Query: 145 ILFSLVARGSVVLAECSATATNASAIARQ------ILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMND-EFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQARR 672 +L +L+ R S L ++ ++ Q + K+ N+ S Y+ H DG+ C+++ + R++ F++L+++ + F K++G+ L EF + + Y D ++++ E+ V VM +NI+ +L RG L+ + D ++N++ + ++R+ A+R Sbjct: 2 VLSTLIMRASDGLPLSASVDDGQENLSEQKKQCKLVTQKLSANSADRASIESGNYVIHYLMKDGIVYYCISESSYPRKLAFSYLDELDREFQKSHGQEALKEGVRPYKFVEFDTFMQKTKRVYQDTRATHNLDKLNTELQDVTRVMTKNIEDLLHRGHSLDHMSDLSSNLRTESKKYRRAAQR 184
BLAST of CN186445 vs. ExPASy Swiss-Prot
Match: S22BA_DANRE (Vesicle-trafficking protein SEC22b-A OS=Danio rerio GN=sec22ba PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 6.310e-12 Identity = 40/170 (23.53%), Postives = 79/170 (46.47%), Query Frame = 1 Query: 223 ARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQARRFRSTVWWRNVKLTVALIILI 732 A+Q+ K+ + + + + FH G+ L + + +++ FA+LED+ F + YG V S EF + + ++ Y D + I E+ V+ +M+ NI++VL+RG+ L L K +N+ + ++R A+ + + V +II + Sbjct: 37 AKQLCRKLNEQSPARCTLEAGKMCFHYVIEKGVCYLALCEAGFPKKLAFAYLEDLEGEFSEQYGAKVPSVSRPYSFIEFDTYIQKTIKSYIDSRARRNLGNINSELHDVQRIMVANIEEVLQRGEALSALDSKASNLSSLSKKYRSDAKYLNTRSTYAKVAAGAVIIITL 206
BLAST of CN186445 vs. ExPASy Swiss-Prot
Match: SC22B_RAT (Vesicle-trafficking protein SEC22b OS=Rattus norvegicus GN=Sec22b PE=1 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11 Identity = 43/172 (25.00%), Postives = 83/172 (48.26%), Query Frame = 1 Query: 223 ARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQAR--RFRSTVWWRNVKLTVALIILI 732 A+Q+ K+ + + + FH G+ L + + +++ FA+LED+H F + +G+ V + EF + + + Y D + I E+ V+ +M+ NI++VL+RG+ L L K N+ + ++R+ A+ RST + + + V I+LI Sbjct: 37 AKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYLNMRST-YAKLAAVAVFFIMLI 207
BLAST of CN186445 vs. ExPASy Swiss-Prot
Match: SC22B_PONAB (Vesicle-trafficking protein SEC22b OS=Pongo abelii GN=SEC22B PE=2 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11 Identity = 43/172 (25.00%), Postives = 83/172 (48.26%), Query Frame = 1 Query: 223 ARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQAR--RFRSTVWWRNVKLTVALIILI 732 A+Q+ K+ + + + FH G+ L + + +++ FA+LED+H F + +G+ V + EF + + + Y D + I E+ V+ +M+ NI++VL+RG+ L L K N+ + ++R+ A+ RST + + + V I+LI Sbjct: 37 AKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYLNMRST-YAKLAAVAVFFIMLI 207
BLAST of CN186445 vs. ExPASy Swiss-Prot
Match: SC22B_MOUSE (Vesicle-trafficking protein SEC22b OS=Mus musculus GN=Sec22b PE=1 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11 Identity = 43/172 (25.00%), Postives = 83/172 (48.26%), Query Frame = 1 Query: 223 ARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQAR--RFRSTVWWRNVKLTVALIILI 732 A+Q+ K+ + + + FH G+ L + + +++ FA+LED+H F + +G+ V + EF + + + Y D + I E+ V+ +M+ NI++VL+RG+ L L K N+ + ++R+ A+ RST + + + V I+LI Sbjct: 37 AKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYLNMRST-YAKLAAVAVFFIMLI 207
BLAST of CN186445 vs. ExPASy Swiss-Prot
Match: SC22B_HUMAN (Vesicle-trafficking protein SEC22b OS=Homo sapiens GN=SEC22B PE=1 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11 Identity = 43/172 (25.00%), Postives = 83/172 (48.26%), Query Frame = 1 Query: 223 ARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQAR--RFRSTVWWRNVKLTVALIILI 732 A+Q+ K+ + + + FH G+ L + + +++ FA+LED+H F + +G+ V + EF + + + Y D + I E+ V+ +M+ NI++VL+RG+ L L K N+ + ++R+ A+ RST + + + V I+LI Sbjct: 37 AKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYLNMRST-YAKLAAVAVFFIMLI 207
BLAST of CN186445 vs. ExPASy Swiss-Prot
Match: SC22B_CRIGR (Vesicle-trafficking protein SEC22b OS=Cricetulus griseus GN=Sec22b PE=1 SV=3) HSP 1 Score: 68.9366 bits (167), Expect = 3.132e-11 Identity = 43/172 (25.00%), Postives = 83/172 (48.26%), Query Frame = 1 Query: 223 ARQILDKIPGNNDSHVSYSQDRYIFHVKRTDGLTVLCMADDTAGRRIPFAFLEDIHQRFVKTYGRAVLSAQAYGMNDEFSRVLSQQMEYYSDDPNADRINRIKGEMSQVRNVMIENIDKVLERGDRLELLVDKTANMQGNTFRFRKQAR--RFRSTVWWRNVKLTVALIILI 732 A+Q+ K+ + + + FH G+ L + + +++ FA+LED+H F + +G+ V + EF + + + Y D + I E+ V+ +M+ NI++VL+RG+ L L K N+ + ++R+ A+ RST + + + V I+LI Sbjct: 37 AKQLFRKLNEQSPTRCTLGAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRPYSFIEFDTFIQKTKKLYIDSRARRNLGSINTELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQDAKYLNMRST-YAKLAAVAVFFIMLI 207 The following BLAST results are available for this feature:
BLAST of CN186445 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186445 ID=CN186445; Name=CN186445; organism=Citrus sinensis; type=EST; length=733bpback to top |