CX674998
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: HCD2_DROME (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Drosophila melanogaster GN=scu PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.314e-13 Identity = 44/115 (38.26%), Postives = 66/115 (57.39%), Query Frame = -3 Query: 80 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPL-GRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 421 G I+N ASV G I QA YSA+KA V+G+T +A++ +++ I + TIAPG + M A L E + + + IP R G+P E L + + NP + G+V+ IDG + M Sbjct: 142 GVIVNTASVAAFDGQIGQAAYSASKAAVVGMTLPIARDLSTQGIRICTIAPGLFNTPMLAALPEKVRTFLAKSIPFPQRLGEPSEYAHLVQAIYENP---LLNGEVIRIDGALRM 253
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: YOHF_ECOLI (Uncharacterized oxidoreductase yohF OS=Escherichia coli (strain K12) GN=yohF PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 1.716e-13 Identity = 52/169 (30.77%), Postives = 77/169 (45.56%), Query Frame = -3 Query: 80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586 +W+ + +++ G FLC+Q+ ++ GRIINI SV D + Y+AAK + GLTKA+A E I VN +APG IA+ M D++ IPL R+G E+ L +L + Y TGQ L +DGG ++ Sbjct: 103 EWRKIFTVDVDGAFLCSQIAARQMV-------------------------KQGQGGRIINITSVHEHTPLPDASAYTAAKHALGGLTKAMALELVRHKILVNAVAPGAIATPMNGMDDSDVKPDAEPSIPLRRFGATHEIASLVVWLC-SEGANYTTGQSLIVDGGFML 245
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: DHGA_BACME (Glucose 1-dehydrogenase A OS=Bacillus megaterium GN=gdhA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.716e-13 Identity = 55/168 (32.74%), Postives = 84/168 (50.00%), Query Frame = -3 Query: 86 WQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKK--ILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGM 583 W VID NLTG FL ++ I + KG +IN++SV ++ +Y+A+K G+ +T+ +A EYA + I VN I PG + + + A+ D E++ + IP+G G+PEEV + FLA + A+ Y+TG L DGGM Sbjct: 109 WNKVIDTNLTGAFLGSREAIKYFV-------------------------ENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAMNTPINAEKFADPEQRADVESMIPMGYIGKPEEVAAVAAFLASSQAS-YVTGITLFADGGM 250
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: SOU2_CANAL (Sorbose reductase homolog SOU2 OS=Candida albicans GN=SOU2 PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.241e-13 Identity = 55/168 (32.74%), Postives = 84/168 (50.00%), Query Frame = -3 Query: 89 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQ--ANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGG 586 KW V+D++L V+ C V P+ KG I AS+ + N+ Q A Y+AAKAGV L+K+++ E+A VN+++PG+IA+ ++ D++ K L+ PLGR +P E+VG +LA + A Y TG L +DGG Sbjct: 137 KWNKVVDVDLNSVYYCAHVVGPIF--------------------------RKKGKGSFIFTASMSASIVNVPQLQAAYNAAKAGVKHLSKSLSVEWAPF-ARVNSVSPGYIATHLSEFADPDVKSKWLQLTPLGREAKPRELVGAYLYLA-SDAASYTTGADLAVDGG 276
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: HCD2_RAT (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Rattus norvegicus GN=Hsd17b10 PE=1 SV=3) HSP 1 Score: 75.485 bits (184), Expect = 2.241e-13 Identity = 41/115 (35.65%), Postives = 64/115 (55.65%), Query Frame = -3 Query: 80 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPL-GRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 421 G IIN ASV G + QA YSA+K G++G+T +A++ A I V TIAPG A+ + L + + + ++P R G P E L + + NP ++ G+V+ +DG + M Sbjct: 148 GVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPIGIRVVTIAPGLFATPLLTTLPDKVRNFLASQVPFPSRLGDPAEYAHLVQMVIENP---FLNGEVIRLDGAIRM 259
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: DHG3_BACME (Glucose 1-dehydrogenase 3 OS=Bacillus megaterium GN=gdhIII PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.241e-13 Identity = 55/168 (32.74%), Postives = 85/168 (50.60%), Query Frame = -3 Query: 86 WQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTA-KLGEDLEKKILEK-IPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGM 583 W VID NLTG FL ++ I + KG +IN++SV ++ +Y+A+K G+ +T+ +A EYA + I VN I PG + + + A K + +++ +E IP+G G+PEEV + FLA + A+ Y+TG L DGGM Sbjct: 109 WNKVIDTNLTGAFLGSREAIKYFV-------------------------ENDIKGNVINMSSVHEMIPWPLFVHYAASKGGMKQMTETLALEYAPKGIRVNNIGPGAMNTPINAEKFADPVQRADVESMIPMGYIGKPEEVAAVAAFLASSQAS-YVTGITLFADGGM 250
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: ARDH_PICST (D-arabinitol 2-dehydrogenase [ribulose-forming] OS=Pichia stipitis GN=ARDH PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.241e-13 Identity = 48/116 (41.38%), Postives = 69/116 (59.48%), Query Frame = -3 Query: 89 GRIINIASVVGLVGNIDQAN--YSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKL--GEDLEKKILE-KIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGG 421 G II I S+ G + N Q Y+ +KAGVI L +++A E+A NI VNT++PG+I + +T + G K+ E KIP+ R +P+E VG +LA A+ Y TG L +DGG Sbjct: 159 GSIILIGSMSGTIVNDPQPQCMYNMSKAGVIHLVRSLACEWAKYNIRVNTLSPGYILTPLTRNVISGHTEMKEAWESKIPMKRMAEPKEFVGSILYLASETASSYTTGHNLVVDGG 274
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: ARDH_CANTR (D-arabinitol 2-dehydrogenase [ribulose-forming] OS=Candida tropicalis GN=ARD PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.241e-13 Identity = 45/116 (38.79%), Postives = 70/116 (60.34%), Query Frame = -3 Query: 89 GRIINIASVVGLVGNIDQAN--YSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKL---GEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGG 421 G II I S+ G + N Q Y+ +KAGVI L +++A E+A NI VNT++PG+I + +T + +++ + KIP+ R +P+E VG +LA + A+ Y TG L +DGG Sbjct: 163 GSIILIGSMSGTIVNDPQPQCMYNMSKAGVIHLARSLACEWAKYNIRVNTLSPGYILTPLTRNVISGHTEMKTEWESKIPMKRMAEPKEFVGSILYLASDSASSYTTGHNLVVDGG 278
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: YXJF_BACSU (Uncharacterized oxidoreductase yxjF OS=Bacillus subtilis GN=yxjF PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 2.927e-13 Identity = 50/123 (40.65%), Postives = 67/123 (54.47%), Query Frame = -3 Query: 89 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEK-------KILEK-----IPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGG 421 GRIINIASV GLVG ++ Y++AK GVIGLTK A E A I VN + PG++ + + DL K +LE+ +P R +E+ FLA A G +TGQ + +DGG Sbjct: 132 GRIINIASVNGLVGFAGKSAYNSAKHGVIGLTKVGALEGAPHGITVNALCPGYVDTQLVRNQLSDLSKTRNVPYDSVLEQVIFPLVPQKRLLSVKEIADYAVFLASEKAKG-VTGQAVVLDGG 253
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: GRDH1_ARATH (Glucose and ribitol dehydrogenase homolog 1 OS=Arabidopsis thaliana GN=At1g54870 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.927e-13 Identity = 43/113 (38.05%), Postives = 62/113 (54.87%), Query Frame = -3 Query: 80 IINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMT-AKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 415 IIN SV GN +Y+A K ++ T+ +A + A + I VN +APG I + + A E+ K ++P+ R GQP EV FLA N + Y TGQVL+ +GG V+ Sbjct: 174 IINTTSVNAYKGNASLLDYTATKGAIVAFTRGLALQLAEKGIRVNGVAPGPIWTPLIPASFNEEKIKNFGSEVPMKRAGQPIEVAPSYVFLACNHCSSYFTGQVLHPNGGAVV 286 The following BLAST results are available for this feature:
BLAST of CX674998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 170
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Sequences
The
following sequences are available for this feature:
EST sequence >CX674998 ID=CX674998; Name=CX674998; organism=Citrus sinensis; type=EST; length=594bpback to top |