CX674998

Overview
NameCX674998
Unique NameCX674998
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length594
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: BUTA_STAAW (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain MW2) GN=butA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.897e-12
Identity = 46/123 (37.40%), Postives = 64/123 (52.03%), Query Frame = -3
Query:   86 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKL----GEDLEK-------KILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGM 421
            G+IIN  S  G+ GN   + Y + K  V GLT+  A++ AS  I VN  APG + + M   +     E+  K       +   +I LGR  QPE+V  +  FLA    + YITGQ + +DGGM
Sbjct:  134 GKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIALGRVSQPEDVSNVVSFLA-GKDSDYITGQTIIVDGGM 255          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: BUTA_STAAS (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain MSSA476) GN=butA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.897e-12
Identity = 46/123 (37.40%), Postives = 64/123 (52.03%), Query Frame = -3
Query:   86 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKL----GEDLEK-------KILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGM 421
            G+IIN  S  G+ GN   + Y + K  V GLT+  A++ AS  I VN  APG + + M   +     E+  K       +   +I LGR  QPE+V  +  FLA    + YITGQ + +DGGM
Sbjct:  134 GKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIALGRVSQPEDVSNVVSFLA-GKDSDYITGQTIIVDGGM 255          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: BUTA_STAAR (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain MRSA252) GN=butA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.897e-12
Identity = 46/123 (37.40%), Postives = 64/123 (52.03%), Query Frame = -3
Query:   86 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKL----GEDLEK-------KILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGM 421
            G+IIN  S  G+ GN   + Y + K  V GLT+  A++ AS  I VN  APG + + M   +     E+  K       +   +I LGR  QPE+V  +  FLA    + YITGQ + +DGGM
Sbjct:  134 GKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIALGRVSQPEDVSNVVSFLA-GKDSDYITGQTIIVDGGM 255          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: BUTA_STAAN (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain N315) GN=butA PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.897e-12
Identity = 46/123 (37.40%), Postives = 64/123 (52.03%), Query Frame = -3
Query:   86 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKL----GEDLEK-------KILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGM 421
            G+IIN  S  G+ GN   + Y + K  V GLT+  A++ AS  I VN  APG + + M   +     E+  K       +   +I LGR  QPE+V  +  FLA    + YITGQ + +DGGM
Sbjct:  134 GKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIALGRVSQPEDVSNVVSFLA-GKDSDYITGQTIIVDGGM 255          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: BUTA_STAAM (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=butA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.897e-12
Identity = 46/123 (37.40%), Postives = 64/123 (52.03%), Query Frame = -3
Query:   86 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKL----GEDLEK-------KILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGM 421
            G+IIN  S  G+ GN   + Y + K  V GLT+  A++ AS  I VN  APG + + M   +     E+  K       +   +I LGR  QPE+V  +  FLA    + YITGQ + +DGGM
Sbjct:  134 GKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIALGRVSQPEDVSNVVSFLA-GKDSDYITGQTIIVDGGM 255          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: BUTA_STAAC (Acetoin(diacetyl) reductase OS=Staphylococcus aureus (strain COL) GN=butA PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.897e-12
Identity = 46/123 (37.40%), Postives = 64/123 (52.03%), Query Frame = -3
Query:   86 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKL----GEDLEK-------KILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGM 421
            G+IIN  S  G+ GN   + Y + K  V GLT+  A++ AS  I VN  APG + + M   +     E+  K       +   +I LGR  QPE+V  +  FLA    + YITGQ + +DGGM
Sbjct:  134 GKIINATSQAGVEGNPGLSLYCSTKFAVRGLTQVAAQDLASEGITVNAFAPGIVQTPMMESIAVATAEEAGKPEAWGWEQFTSQIALGRVSQPEDVSNVVSFLA-GKDSDYITGQTIIVDGGM 255          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: UCPA_ECO57 (Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN=ucpA PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.478e-12
Identity = 47/123 (38.21%), Postives = 67/123 (54.47%), Query Frame = -3
Query:   80 GRIINIASVVG-LVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLG-----EDLEKKILE---KIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 421
            GRI+ ++SV G +V +  +  Y+  KA ++GLTK++A EYA   I VN I PG++ + M   +      ED E  + E    IPL R   P EV  L  FLA +  + Y+TG    IDGG  +
Sbjct:  134 GRIVMMSSVTGDMVADPGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADPLEVGELAAFLA-SDESSYLTGTQNVIDGGSTL 255          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: HCD2_BOVIN (3-hydroxyacyl-CoA dehydrogenase type-2 OS=Bos taurus GN=HSD17B10 PE=1 SV=3)

HSP 1 Score: 72.0182 bits (175), Expect = 2.478e-12
Identity = 39/115 (33.91%), Postives = 62/115 (53.91%), Query Frame = -3
Query:   80 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPL-GRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 421
            G IIN ASV    G + QA YSA+K G++G+T  +A++ A   I V TIAPG   + +   L + +   +  ++P   R G P E   L + +  N    ++ G+V+ +DG + M
Sbjct:  148 GVIINTASVAAFEGQVGQAAYSASKGGIVGMTLPIARDLAPMGIRVMTIAPGLFGTPLLTTLPDKVRNFLASQVPFPSRLGDPAEYAHLVQAIIEN---SFLNGEVIRLDGAIRM 259          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: DHG_BACSU (Glucose 1-dehydrogenase OS=Bacillus subtilis GN=gdh PE=2 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 2.478e-12
Identity = 53/168 (31.55%), Postives = 82/168 (48.81%), Query Frame = -3
Query:   86 WQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKK--ILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGM 583
            W  VI  NLTG FL ++  I   +                             KG +IN++SV  ++      +Y+A+K G+  +T+ +A EYA + I VN I PG I + + A+   D ++K  +   IP+G  G+PEE+  +  +LA   A+ Y+TG  L  DGGM
Sbjct:  109 WDKVIGTNLTGAFLGSREAIKYFV-------------------------ENDIKGNVINMSSVHEVIPWPLFVHYAASKGGIKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPKQKADVESMIPMGYIGEPEEIAAVAAWLASKEAS-YVTGITLFADGGM 250          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: UCPA_SALTY (Oxidoreductase ucpA OS=Salmonella typhimurium GN=ucpA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.237e-12
Identity = 44/123 (35.77%), Postives = 68/123 (55.28%), Query Frame = -3
Query:   80 GRIINIASVVG-LVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLG--------EDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 421
            GRI+ ++SV G +V +  +  Y+ +KA ++GLTK++A EYA   I VN I PG++ + M   +         E +  ++ + IPL R   P EV  L  FLA +  + Y+TG    IDGG  +
Sbjct:  134 GRIVMMSSVTGDMVADPGETAYALSKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPDDPESVLTEMAKAIPLRRLADPLEVGELAAFLA-SDESSYLTGTQNVIDGGSTL 255          
The following BLAST results are available for this feature:
BLAST of CX674998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
BUTA_STAAW1.897e-1237.40Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
BUTA_STAAS1.897e-1237.40Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
BUTA_STAAR1.897e-1237.40Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
BUTA_STAAN1.897e-1237.40Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
BUTA_STAAM1.897e-1237.40Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
BUTA_STAAC1.897e-1237.40Acetoin(diacetyl) reductase OS=Staphylococcus aure... [more]
UCPA_ECO572.478e-1238.21Oxidoreductase ucpA OS=Escherichia coli O157:H7 GN... [more]
HCD2_BOVIN2.478e-1233.913-hydroxyacyl-CoA dehydrogenase type-2 OS=Bos taur... [more]
DHG_BACSU2.478e-1231.55Glucose 1-dehydrogenase OS=Bacillus subtilis GN=gd... [more]
UCPA_SALTY3.237e-1235.77Oxidoreductase ucpA OS=Salmonella typhimurium GN=u... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_59A04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-59A04-A7-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674998 ID=CX674998; Name=CX674998; organism=Citrus sinensis; type=EST; length=594bp
TTTCAACCCATTCGATCTTACATATGATAGCTACAGGTCAGAACTGAAAC
TAAACCAGGCATAATGGGTCACTGACCTACATAACCATTCCTCCGTCAAT
ATTAAGCACCTGTCCAGTAATGTAACCGGTTGCGGGATTGATGGCCAAGA
ATTCCTCCAGTCCAACAACTTCTTCAGGTTGGCCATACCTTCCTAACGGG
ATTTTCTCCAAGATCTTCTTTTCTAGGTCTTCGCCAAGCTTGGCGGTCAT
ATCAGACGCGATGAATCCTGGTGCAATAGTATTGACATTAATGTTTCTGC
TTGCATATTCCTTTGCAACAGCTTTTGTCAGGCCAATAACACCTGCTTTT
GCAGCACTGTAATTGGCTTGGTCAATATTTCCAACCAGACCAACAACTGA
TGCTATATTGATTATTCTTCCCTTTTTCTTCTTCATCATGATTTTGGCTG
CTGCCTGCAAAGATAAATGGCCTCAGTTCCAATATACTTTAGCATCCATT
AGCATAACTAGTAAGATCATAGGAATGTGCACCTGTGTACACAGGAATAC
ACCTGTAAGATTCAGATCAATAACGTCCTGCCATTTGTGACCCT
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