CX674998

Overview
NameCX674998
Unique NameCX674998
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length594
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: NODG_RHIS3 (Nodulation protein G OS=Rhizobium sp. (strain N33) GN=nodG PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 9.700e-25
Identity = 68/169 (40.24%), Postives = 94/169 (55.62%), Query Frame = -3
Query:   80 WQDVIDLNLTGVFLCT-QVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 583
            W  V+++NLT VF  T ++  PM+                               GRIINI SVVG+ GN  Q NY A+KAG+IG +K++A+E A+RNI VN +APGFI S MT KL +  ++ I+  IP  R G   EV     +LA N A  Y+TGQ ++++GG+ M
Sbjct:  104 WDTVLEVNLTAVFRLTRELTHPMM---------------------------RRRHGRIINITSVVGVTGNPGQTNYCASKAGMIGFSKSLAQEIATRNITVNCVAPGFIESAMTDKLNDKQKEAIMAAIPTRRMGTSVEVASAVAYLASNEA-AYVTGQTIHVNGGLAM 244          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: CBR4_XENLA (Carbonyl reductase family member 4 OS=Xenopus laevis GN=cbr4 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.655e-24
Identity = 61/112 (54.46%), Postives = 78/112 (69.64%), Query Frame = -3
Query:   86 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGM 421
            G I+NI S+VG  GNI Q+ Y A+K G+IG +K++AKE A RNI VN +APGFI +DMT+ L ED   K+   IPLGR+G+PEEV     FL  +P   YITG VL +DGG+
Sbjct:  127 GSIVNIGSIVGHKGNIGQSIYGASKEGLIGFSKSLAKEVAKRNIRVNVVAPGFIRTDMTSDLKEDSLNKM---IPLGRFGEPEEVAQSVLFLLESP---YITGHVLVVDGGL 232          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: NODG_RHIME (Nodulation protein G OS=Rhizobium meliloti GN=nodG PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.822e-24
Identity = 57/114 (50.00%), Postives = 78/114 (68.42%), Query Frame = -3
Query:   80 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 421
            GRIIN+ SV G +GN  Q NY A+KAG+IG +K++A+E A+RNI VN +APGFI S MT KL    ++KI+  IP+ R G   EV     +LA + A  Y+TGQ ++++GGM M
Sbjct:  132 GRIINVTSVAGAIGNPGQTNYCASKAGMIGFSKSLAQEIATRNITVNCVAPGFIESAMTDKLNHKQKEKIMVAIPIHRMGTGTEVASAVAYLASDHA-AYVTGQTIHVNGGMAM 244          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: DHB8_CANFA (Estradiol 17-beta-dehydrogenase 8 OS=Canis familiaris GN=HSD17B8 PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.814e-24
Identity = 63/168 (37.50%), Postives = 90/168 (53.57%), Query Frame = -3
Query:   80 WQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 583
            W  VI +NL G+FL TQ     ++                             +G IINI+S+VG VGN+ Q NY+A+KAGVIGLT+  A+E     I  N++ PGFI + MT K+ + +  K++  IP+G  G PE+V     FLA +  +GYITG  + + GG+ M
Sbjct:  118 WDRVIAVNLKGIFLVTQAAAQALV-------------------------SSGCRGSIINISSIVGKVGNVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFITTPMTQKVPQKVLDKVIGMIPMGHLGDPEDVADAVTFLA-SEDSGYITGASVEVTGGLYM 259          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: CBR4_DANRE (Carbonyl reductase family member 4 OS=Danio rerio GN=cbr4 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 8.212e-24
Identity = 60/112 (53.57%), Postives = 77/112 (68.75%), Query Frame = -3
Query:   86 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGM 421
            G I+NI SVVG+ GN  Q  YSA+KAG+ G T+++AKE ASRNI VN +APG I +DMTA L E+     +  IPLGR+G+P EV     FL  +P   YITGQ+L +DGG+
Sbjct:  128 GAIVNIGSVVGVKGNAGQCVYSASKAGLEGFTRSLAKEVASRNIRVNLVAPGLIHTDMTAGLAEE---AAVRTIPLGRFGEPAEVAQAMLFLLESP---YITGQILLVDGGL 233          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: CBR4_XENTR (Carbonyl reductase family member 4 OS=Xenopus tropicalis GN=cbr4 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.072e-23
Identity = 59/112 (52.68%), Postives = 76/112 (67.86%), Query Frame = -3
Query:   86 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGM 421
            G I+NI S+VG  GNI Q+ Y A+K G+IG +K++AKE A RNI VN +APGFI +DMT  L ED    + + +PLGR+G PEEV     FL  +P   YITG VL +DGG+
Sbjct:  127 GAIVNIGSIVGHKGNIGQSIYGASKEGLIGFSKSLAKEVAKRNIRVNVVAPGFIHTDMTLGLEED---SLTKMVPLGRFGDPEEVAQSVLFLLESP---YITGHVLVVDGGL 232          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: DHB8_PIG (Estradiol 17-beta-dehydrogenase 8 OS=Sus scrofa GN=HSD17B8 PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 5.323e-23
Identity = 62/168 (36.90%), Postives = 90/168 (53.57%), Query Frame = -3
Query:   80 WQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 583
            W  VI +NL G+FL TQ     ++                              G IINI+S++G VGN+ Q NY+A+KAGVIGLT+AVA+E     I  N++ PGFI + M  K+ + +  K++  IP+G  G P +V  +  FLA +  +GYITG  + + GG+ M
Sbjct:  118 WDKVIAVNLKGIFLVTQAAAQALV-------------------------SSGCPGSIINISSIIGKVGNMGQTNYAASKAGVIGLTQAVARELGRYRIRCNSVLPGFIKTPMAQKVPQKVLDKVVGMIPMGHLGGPPDVADVVAFLA-SEDSGYITGASVEVTGGLFM 259          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: PHAB_ACISR (Acetoacetyl-CoA reductase OS=Acinetobacter sp. (strain RA3849) GN=phaB PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 9.079e-23
Identity = 65/169 (38.46%), Postives = 89/169 (52.66%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +W  VID NL  +F  TQ     +L                              GRI+NI+SV GL G   QANYSA+KAG+IG TKA+A+E A  NI VN +APG+ A+ M   + ED+ K I  +IPL R   P E+     +L ++    Y+TG+ L+I+GG+ M
Sbjct:  106 QWSQVIDTNLKTLFTVTQPVFNKML--------------------------EQKSGRIVNISSVNGLKGQFGQANYSASKAGIIGFTKALAQEGARSNICVNVVAPGYTATPMVTAMREDVIKSIEAQIPLQRLAAPAEIAAAVMYL-VSEHGAYVTGETLSINGGLYM 247          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG2_SYNY3 (3-oxoacyl-[acyl-carrier-protein] reductase 2 OS=Synechocystis sp. (strain PCC 6803) GN=fabG2 PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 9.079e-23
Identity = 50/110 (45.45%), Postives = 75/110 (68.18%), Query Frame = -3
Query:   92 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDG 421
            G I+ I+S+ G  GN+ Q NYSA KAGVIG+ K++A+E A   +  N +APGFI ++MT  + ED+ +KI ++IP  R+G+PEE+     FL    A+ Y+TG+VL ++G
Sbjct:  127 GSIVAISSISGERGNVGQTNYSATKAGVIGMMKSLAREGARYGVRANAVAPGFIDTEMTLAIREDIREKITKEIPFRRFGKPEEIAWAVAFLLSPVASSYVTGEVLRVNG 236          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: PHBB_RHIME (Acetoacetyl-CoA reductase OS=Rhizobium meliloti GN=phbB PE=3 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.186e-22
Identity = 67/167 (40.12%), Postives = 95/167 (56.89%), Query Frame = -3
Query:   89 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGED-LEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGG 586
            +W +VI  NLTGVF  T    P+            W+                  GRI+NI+S+ G  G + Q NYSAAKAG +GLTKA+A+E A++ I VN I PG+I ++M   + E  L ++I+ +IP+GR G+PEEV     FLA + A G+ITG  ++ +GG
Sbjct:   98 QWGEVIGTNLTGVFNMTH---PL------------WS-----------GMRDRGFGRIVNISSINGQKGQMGQVNYSAAKAGDLGLTKALAQEGAAKGITVNAICPGYIGTEMVRAVPEKVLNERIIPQIPVGRLGEPEEVARCVVFLASDDA-GFITGSTISANGG 237          
The following BLAST results are available for this feature:
BLAST of CX674998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
NODG_RHIS39.700e-2540.24Nodulation protein G OS=Rhizobium sp. (strain N33)... [more]
CBR4_XENLA1.655e-2454.46Carbonyl reductase family member 4 OS=Xenopus laev... [more]
NODG_RHIME2.822e-2450.00Nodulation protein G OS=Rhizobium meliloti GN=nodG... [more]
DHB8_CANFA4.814e-2437.50Estradiol 17-beta-dehydrogenase 8 OS=Canis familia... [more]
CBR4_DANRE8.212e-2453.57Carbonyl reductase family member 4 OS=Danio rerio ... [more]
CBR4_XENTR1.072e-2352.68Carbonyl reductase family member 4 OS=Xenopus trop... [more]
DHB8_PIG5.323e-2336.90Estradiol 17-beta-dehydrogenase 8 OS=Sus scrofa GN... [more]
PHAB_ACISR9.079e-2338.46Acetoacetyl-CoA reductase OS=Acinetobacter sp. (st... [more]
FABG2_SYNY39.079e-2345.453-oxoacyl-[acyl-carrier-protein] reductase 2 OS=Sy... [more]
PHBB_RHIME1.186e-2240.12Acetoacetyl-CoA reductase OS=Rhizobium meliloti GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_59A04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-59A04-A7-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674998 ID=CX674998; Name=CX674998; organism=Citrus sinensis; type=EST; length=594bp
TTTCAACCCATTCGATCTTACATATGATAGCTACAGGTCAGAACTGAAAC
TAAACCAGGCATAATGGGTCACTGACCTACATAACCATTCCTCCGTCAAT
ATTAAGCACCTGTCCAGTAATGTAACCGGTTGCGGGATTGATGGCCAAGA
ATTCCTCCAGTCCAACAACTTCTTCAGGTTGGCCATACCTTCCTAACGGG
ATTTTCTCCAAGATCTTCTTTTCTAGGTCTTCGCCAAGCTTGGCGGTCAT
ATCAGACGCGATGAATCCTGGTGCAATAGTATTGACATTAATGTTTCTGC
TTGCATATTCCTTTGCAACAGCTTTTGTCAGGCCAATAACACCTGCTTTT
GCAGCACTGTAATTGGCTTGGTCAATATTTCCAACCAGACCAACAACTGA
TGCTATATTGATTATTCTTCCCTTTTTCTTCTTCATCATGATTTTGGCTG
CTGCCTGCAAAGATAAATGGCCTCAGTTCCAATATACTTTAGCATCCATT
AGCATAACTAGTAAGATCATAGGAATGTGCACCTGTGTACACAGGAATAC
ACCTGTAAGATTCAGATCAATAACGTCCTGCCATTTGTGACCCT
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