CX674998

Overview
NameCX674998
Unique NameCX674998
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length594
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_BUCAP (3-oxoacyl-[acyl-carrier-protein] reductase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=fabG PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.549e-22
Identity = 64/169 (37.87%), Postives = 94/169 (55.62%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +W++VI +NLT VF  ++       ++  M  K Y                    GRI+ I SV+G +GN  Q NYSA+K+G+IG  K++A E A + I VN ++PGFI +++T  L     KK L KIP+ R G  EE+     FL+   A+ YITGQ ++++GGM M
Sbjct:  102 EWENVIKINLTSVFYMSKS------VIRSMIKKRY--------------------GRIVTIGSVIGYLGNRGQINYSASKSGLIGFHKSLALEVAQKGITVNIVSPGFIKTNLTKNLNVFQYKKHLSKIPMKRIGTAEEIANAVIFLSSEKAS-YITGQTIHVNGGMYM 243          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: CBR4_BOVIN (Carbonyl reductase family member 4 OS=Bos taurus GN=CBR4 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.023e-22
Identity = 56/112 (50.00%), Postives = 75/112 (66.96%), Query Frame = -3
Query:   86 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGM 421
            G I+N+ SVVGL GN  Q+ YSA+K G++G ++A+AKE A + I VN +APGFI +DMT  L E+L KK    IPLGR+G   +V     FL  +P   Y+TG VL +DGG+
Sbjct:  128 GSIVNVGSVVGLKGNSGQSVYSASKGGLVGFSRALAKEVAKKKIRVNVVAPGFIHTDMTKDLNEELLKK---NIPLGRFGDALDVAQAAVFLLESP---YVTGHVLVVDGGL 233          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: Y1385_MYCBO (Uncharacterized oxidoreductase Mb1385 OS=Mycobacterium bovis GN=fabG2 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.642e-22
Identity = 54/111 (48.65%), Postives = 75/111 (67.57%), Query Frame = -3
Query:   89 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGG 421
            G I+N++SV G VG + Q NYSAAKAG++G+TKA AKE A   I VN IAPG I S MT  + + +  + L ++P+GR G+P EV  +  FLA +  + Y+TG VL++ GG
Sbjct:  135 GAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQKLAEVPMGRAGEPSEVASVAVFLA-SDLSSYMTGTVLDVTGG 244          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: Y1350_MYCTU (Uncharacterized oxidoreductase Rv1350/MT1393 OS=Mycobacterium tuberculosis GN=fabG2 PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.642e-22
Identity = 54/111 (48.65%), Postives = 75/111 (67.57%), Query Frame = -3
Query:   89 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGG 421
            G I+N++SV G VG + Q NYSAAKAG++G+TKA AKE A   I VN IAPG I S MT  + + +  + L ++P+GR G+P EV  +  FLA +  + Y+TG VL++ GG
Sbjct:  135 GAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQKLAEVPMGRAGEPSEVASVAVFLA-SDLSSYMTGTVLDVTGG 244          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: CBR4_RAT (Carbonyl reductase family member 4 OS=Rattus norvegicus GN=Cbr4 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 2.642e-22
Identity = 56/112 (50.00%), Postives = 75/112 (66.96%), Query Frame = -3
Query:   86 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGM 421
            G I+N+ S++GL GN+ QA YSA K G+IG ++++AKE A + I VN +APGFI +DMT  L E+  KK    IPLGR+G+  EV     FL  +P   YITG VL +DGG+
Sbjct:  127 GSIVNVGSIIGLKGNVGQAAYSATKGGLIGFSRSLAKEVARKKIRVNVVAPGFIHTDMTKHLKEEHFKK---NIPLGRFGEALEVAHAVVFLLESP---YITGHVLIVDGGL 232          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: PHBB_ZOORA (Acetoacetyl-CoA reductase OS=Zoogloea ramigera GN=phbB PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.450e-22
Identity = 63/167 (37.72%), Postives = 94/167 (56.29%), Query Frame = -3
Query:   89 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGED-LEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGG 586
            +W  VI+ NLTG+F  T                  W+                  GRI+NI+S+ G  G + QANYSAAKAG +G TKA+A+E A++ I VN I PG+I ++M   + E  L ++I+ +IP+GR G+P+E+  +  FLA + A G+ITG  ++ +GG
Sbjct:   98 QWNAVINTNLTGLFNMTHP---------------VWS-----------GMRDRSFGRIVNISSINGQKGQMGQANYSAAKAGDLGFTKALAQEGAAKGITVNAICPGYIGTEMVRAIPEKVLNERIIPQIPVGRLGEPDEIARIVVFLASDEA-GFITGSTISANGG 237          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: PHBB_CHRVI (Acetoacetyl-CoA reductase OS=Chromatium vinosum GN=phbB PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 4.506e-22
Identity = 54/114 (47.37%), Postives = 75/114 (65.79%), Query Frame = -3
Query:   80 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 421
            GRIINI+SV G  G   QANYSAAKAG+ G T A+A+E AS+ + VNTI+PG++ + MT  + +D+   I+  IP+ R  QP E+     FLA    +GY+TG  L ++GG+ M
Sbjct:  133 GRIINISSVNGQRGQFGQANYSAAKAGMHGFTMALAQEGASKGVTVNTISPGYVETAMTLAMNDDVRNSIISGIPMRRMAQPNEIAAAIAFLA-GDESGYMTGANLPVNGGLFM 245          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: CBR4_MOUSE (Carbonyl reductase family member 4 OS=Mus musculus GN=Cbr4 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 5.885e-22
Identity = 54/112 (48.21%), Postives = 75/112 (66.96%), Query Frame = -3
Query:   86 GRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGM 421
            G I+N+ S++GL GN+ Q+ YSA K G++G ++++AKE A + I VN +APGFI +DMT  L E+  KK    IPLGR+G+  EV     FL  +P   YITG VL +DGG+
Sbjct:  127 GSIVNVGSIIGLKGNVGQSAYSATKGGLVGFSRSLAKEVARKKIRVNVVAPGFIRTDMTRHLKEEHFKK---NIPLGRFGETLEVAHAVVFLLESP---YITGHVLIVDGGL 232          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: FABG_BUCAI (3-oxoacyl-[acyl-carrier-protein] reductase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=fabG PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 7.686e-22
Identity = 64/169 (37.87%), Postives = 91/169 (53.85%), Query Frame = -3
Query:   80 KWQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITGQVLNIDGGMVM 586
            +W DVI  NL+ VF     H+   ++  ++  +                     +GRII I SV+   GN  Q NYSA+K+G+IG  K++A E AS+ I VN ++PG I ++ T KL     +K L  IP+ R+GQ EEV     FLA   A+ YITG  L+++GGM M
Sbjct:  102 EWDDVIKTNLSSVF-----HLVKSVIRSMIKKR---------------------QGRIITIGSVIAYTGNKGQVNYSASKSGLIGFHKSLALEVASKGITVNIVSPGLIKTNFTEKLNSIQYQKYLSNIPMKRFGQKEEVADAVIFLASKKAS-YITGHTLHVNGGMYM 243          
BLAST of CX674998 vs. ExPASy Swiss-Prot
Match: DHB8_CALJA (Estradiol 17-beta-dehydrogenase 8 (Fragment) OS=Callithrix jacchus GN=HSD17B8 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 7.686e-22
Identity = 62/157 (39.49%), Postives = 83/157 (52.87%), Query Frame = -3
Query:  113 WQDVIDLNLTGVFLCTQVHIPMILLVMLMDAKVYWN*GHLSLQXXXXXXXXXXKGRIINIASVVGLVGNIDQANYSAAKAGVIGLTKAVAKEYASRNINVNTIAPGFIASDMTAKLGEDLEKKILEKIPLGRYGQPEEVVGLEEFLAINPATGYITG 583
            W  VI +NL G FL TQ     ++                              G IINI+S+VG VGN+ Q NY+A+KAGVIGLT+  A+E     I  N++ PGFIA+ MT K+ + +  KI   IP+G  G PE+V  +  FLA +  +GYITG
Sbjct:    2 WDKVIAVNLKGTFLVTQAAGQALV-------------------------SSGCSGSIINISSIVGKVGNMGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVMNKITGMIPMGHLGDPEDVADVVAFLA-SEDSGYITG 132          
The following BLAST results are available for this feature:
BLAST of CX674998 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 170
Match NameE-valueIdentityDescription
FABG_BUCAP1.549e-2237.873-oxoacyl-[acyl-carrier-protein] reductase OS=Buch... [more]
CBR4_BOVIN2.023e-2250.00Carbonyl reductase family member 4 OS=Bos taurus G... [more]
Y1385_MYCBO2.642e-2248.65Uncharacterized oxidoreductase Mb1385 OS=Mycobacte... [more]
Y1350_MYCTU2.642e-2248.65Uncharacterized oxidoreductase Rv1350/MT1393 OS=My... [more]
CBR4_RAT2.642e-2250.00Carbonyl reductase family member 4 OS=Rattus norve... [more]
PHBB_ZOORA3.450e-2237.72Acetoacetyl-CoA reductase OS=Zoogloea ramigera GN=... [more]
PHBB_CHRVI4.506e-2247.37Acetoacetyl-CoA reductase OS=Chromatium vinosum GN... [more]
CBR4_MOUSE5.885e-2248.21Carbonyl reductase family member 4 OS=Mus musculus... [more]
FABG_BUCAI7.686e-2237.873-oxoacyl-[acyl-carrier-protein] reductase OS=Buch... [more]
DHB8_CALJA7.686e-2239.49Estradiol 17-beta-dehydrogenase 8 (Fragment) OS=Ca... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_59A04_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-59A04-A7-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX674998 ID=CX674998; Name=CX674998; organism=Citrus sinensis; type=EST; length=594bp
TTTCAACCCATTCGATCTTACATATGATAGCTACAGGTCAGAACTGAAAC
TAAACCAGGCATAATGGGTCACTGACCTACATAACCATTCCTCCGTCAAT
ATTAAGCACCTGTCCAGTAATGTAACCGGTTGCGGGATTGATGGCCAAGA
ATTCCTCCAGTCCAACAACTTCTTCAGGTTGGCCATACCTTCCTAACGGG
ATTTTCTCCAAGATCTTCTTTTCTAGGTCTTCGCCAAGCTTGGCGGTCAT
ATCAGACGCGATGAATCCTGGTGCAATAGTATTGACATTAATGTTTCTGC
TTGCATATTCCTTTGCAACAGCTTTTGTCAGGCCAATAACACCTGCTTTT
GCAGCACTGTAATTGGCTTGGTCAATATTTCCAACCAGACCAACAACTGA
TGCTATATTGATTATTCTTCCCTTTTTCTTCTTCATCATGATTTTGGCTG
CTGCCTGCAAAGATAAATGGCCTCAGTTCCAATATACTTTAGCATCCATT
AGCATAACTAGTAAGATCATAGGAATGTGCACCTGTGTACACAGGAATAC
ACCTGTAAGATTCAGATCAATAACGTCCTGCCATTTGTGACCCT
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