CN186434

Overview
NameCN186434
Unique NameCN186434
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7281 contig Csv1_Contig7281:807..1561. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN186434 vs. ExPASy Swiss-Prot
Match: ACTC_BIOTE (Actin, cytoplasmic OS=Biomphalaria tenagophila PE=3 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 1.965e-72
Identity = 129/149 (86.58%), Postives = 140/149 (93.96%), Query Frame = -1 
Query:  309 LETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 755
            ++TA +SSS+EK+YELPDGQ+ITIG ERFRCPE +FQPS +GMEAAGIHETTYNSIMKCDVDIRKDLY N VLSGGSTMFPGIADRM KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  228 MQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of CN186434 vs. ExPASy Swiss-Prot
Match: ACTC_BIOAL (Actin, cytoplasmic OS=Biomphalaria alexandrina PE=3 SV=1)

HSP 1 Score: 272.322 bits (695), Expect = 1.965e-72
Identity = 129/149 (86.58%), Postives = 140/149 (93.96%), Query Frame = -1 
Query:  309 LETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 755
            ++TA +SSS+EK+YELPDGQ+ITIG ERFRCPE +FQPS +GMEAAGIHETTYNSIMKCDVDIRKDLY N VLSGGSTMFPGIADRM KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  228 MQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of CN186434 vs. ExPASy Swiss-Prot
Match: ACT_PLAMG (Actin, adductor muscle OS=Placopecten magellanicus PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 3.353e-72
Identity = 130/149 (87.25%), Postives = 140/149 (93.96%), Query Frame = -1 
Query:  309 LETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 755
            + TA SSSS+EK+YELPDGQ+ITIG ERFRCPE LFQPS +GME+AGIHETTYNSIMKCDVDIRKDLY N VLSGG+TMFPGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  228 MATAASSSSLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of CN186434 vs. ExPASy Swiss-Prot
Match: ACTC_BIOGL (Actin, cytoplasmic OS=Biomphalaria glabrata PE=2 SV=2)

HSP 1 Score: 271.166 bits (692), Expect = 4.379e-72
Identity = 129/149 (86.58%), Postives = 139/149 (93.29%), Query Frame = -1 
Query:  309 LETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 755
            ++TA +SSS+EK+YELPDGQ+ITIG ERFRCPE  FQPS +GMEAAGIHETTYNSIMKCDVDIRKDLY N VLSGGSTMFPGIADRM KEITALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  228 MQTASTSSSLEKSYELPDGQVITIGNERFRCPEATFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of CN186434 vs. ExPASy Swiss-Prot
Match: ACT1_ACACA (Actin-1 OS=Acanthamoeba castellanii PE=3 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 4.379e-72
Identity = 128/149 (85.91%), Postives = 141/149 (94.63%), Query Frame = -1 
Query:  309 LETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 755
            + TA SSS++EK+YELPDGQ+ITIG ERFR PE LFQPS +GME+AGIHETTYNSIMKCDVDIRKDLYGN+VLSGG+TMFPGIADRM KE+TALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  227 MHTAASSSALEKSYELPDGQVITIGNERFRAPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGIADRMQKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPSIVHRKCF 375
[Close]
BLAST of CN186434 vs. ExPASy Swiss-Prot
Match: ACT_HYDAT (Actin, non-muscle 6.2 OS=Hydra attenuata PE=3 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 5.719e-72
Identity = 129/149 (86.58%), Postives = 140/149 (93.96%), Query Frame = -1 
Query:  309 LETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 755
            ++TA SSSS+EK+YELPDGQ+ITIG ERFRCPE LFQPS IGME+AGIHETTYNSIMKCDVDIRKDLY N VLSGG+TMFPGIADRM KEI+ALAP +MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  228 MQTAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of CN186434 vs. ExPASy Swiss-Prot
Match: ACT5C_ANOGA (Actin-5C OS=Anopheles gambiae GN=Act5C PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 5.719e-72
Identity = 129/149 (86.58%), Postives = 139/149 (93.29%), Query Frame = -1 
Query:  309 LETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 755
            + TA SSSS+EK+YELPDGQ+ITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  228 MATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of CN186434 vs. ExPASy Swiss-Prot
Match: ACT4_BOMMO (Actin, cytoplasmic A4 OS=Bombyx mori GN=A4 PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 5.719e-72
Identity = 129/149 (86.58%), Postives = 139/149 (93.29%), Query Frame = -1 
Query:  309 LETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 755
            + TA SSSS+EK+YELPDGQ+ITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  228 MATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of CN186434 vs. ExPASy Swiss-Prot
Match: ACT3B_HELAM (Actin-A3b, cytoplasmic OS=Helicoverpa armigera GN=actA3b PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 5.719e-72
Identity = 129/149 (86.58%), Postives = 139/149 (93.29%), Query Frame = -1 
Query:  309 LETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 755
            + TA SSSS+EK+YELPDGQ+ITIG ERFRCPE LFQPS +GMEA GIHETTYNSIMKCDVDIRKDLY N VLSGG+TM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  228 MATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
[Close]
BLAST of CN186434 vs. ExPASy Swiss-Prot
Match: ACT2_ONCVO (Actin-2 OS=Onchocerca volvulus GN=act-2b PE=3 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 5.719e-72
Identity = 128/149 (85.91%), Postives = 140/149 (93.96%), Query Frame = -1 
Query:  309 LETAKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHRKCF 755
            + TA SSSS+EK+YELPDGQ+IT+G ERFRCPE LFQPS +GME+AGIHETTYNSIMKCD+DIRKDLY N VLSGGSTM+PGIADRM KEITALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGPSIVHRKCF
Sbjct:  228 MATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGSTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF 376
The following BLAST results are available for this feature:
BLAST of CN186434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 479
Match NameE-valueIdentityDescription
ACTC_BIOTE1.965e-7286.58Actin, cytoplasmic OS=Biomphalaria tenagophila PE=... [more]
ACTC_BIOAL1.965e-7286.58Actin, cytoplasmic OS=Biomphalaria alexandrina PE=... [more]
ACT_PLAMG3.353e-7287.25Actin, adductor muscle OS=Placopecten magellanicus... [more]
ACTC_BIOGL4.379e-7286.58Actin, cytoplasmic OS=Biomphalaria glabrata PE=2 S... [more]
ACT1_ACACA4.379e-7285.91Actin-1 OS=Acanthamoeba castellanii PE=3 SV=1[more]
ACT_HYDAT5.719e-7286.58Actin, non-muscle 6.2 OS=Hydra attenuata PE=3 SV=1[more]
ACT5C_ANOGA5.719e-7286.58Actin-5C OS=Anopheles gambiae GN=Act5C PE=2 SV=1[more]
ACT4_BOMMO5.719e-7286.58Actin, cytoplasmic A4 OS=Bombyx mori GN=A4 PE=2 SV... [more]
ACT3B_HELAM5.719e-7286.58Actin-A3b, cytoplasmic OS=Helicoverpa armigera GN=... [more]
ACT2_ONCVO5.719e-7285.91Actin-2 OS=Onchocerca volvulus GN=act-2b PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002O06_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002O06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186434 ID=CN186434; Name=CN186434; organism=Citrus sinensis; type=EST; length=755bp
GCATCCAACCACTCTTCATCTCCAGCTACAAACACCCTTTTTAAAATAAA
AAAAAGGAAAAAAAAGAAAAAAGACTTGGTTGAACACCAGATGAATGCAA
GGCAAGGAAGATGGTTGAGTACAGAAATAAGCCCCCCTCAAACGCTGTAA
GAAGCTTGTATAATAACATCAATATCGAGATATGCCTCCTTCAATGGCCC
CATCCTTAGCACTTCTCCATGTCAACCAACTTGAGTTCGCGAAACGAGAC
ACAAAAAACCAACTAAATGGAAAAAAAGAACTCACCCATCAAGCACTTAA
AGAACTTAGAAGCATTTCCTGTGGACAATGGATGGACCAGACTCATCATA
CTCGCCCTTTGAGATCCACATCTGCTGGAAGGTGCTGAGGGATGCAAGGA
TTGATCCTCCAATCCAAACACTGTATTTTCTCTCTGGTGGAGCCACGACC
TTGATCTTCATGCTGCTTGGAGCAAGTGCTGTGATTTCCTTGCTCATACG
GTCGGCAATACCAGGGAACATAGTTGAACCCCCACTGAGAACAATGTTAC
CATACAGATCCTTTCTAATATCCACATCACACTTCATGATGGAGTTGTAG
GTAGTCTCATGAATACCAGCAGCTTCCATTCCGATGAGAGATGGCTGGAA
CAGAACTTCTGGGCAACGGAATCTTTCAGCTCCAATGGTGATGATCTGGC
CATCAGGCAGCTCATAGTTCTTCTCAACAGATGAGCTGCTCTTGGCAGTC
TCAAG
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