CN186434
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186434 vs. ExPASy Swiss-Prot
Match: ARP6_YARLI (Actin-like protein ARP6 OS=Yarrowia lipolytica GN=ARP6 PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.530e-16 Identity = 50/159 (31.45%), Postives = 75/159 (47.17%), Query Frame = -1 Query: 336 LETAKSSSSVEKNYELPDG-------------------QIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESG 755 L+ AK + S++ Y LPD Q + +G ERF PE+LF PS+I ++ +G+ ET SI + R L NIV+ GG PG R+ K++ L PS +K + ++ GG +L F + ++K EYDE G Sbjct: 209 LDLAKKTKSLQVEYALPDYKTTKLGYVVDRKQHDISELQTLKLGNERFTMPEILFDPSIIDLQQSGLCETIAESIQASPKEFRSLLCSNIVIVGGCAKLPGFQSRLEKDLRPLIPSEYHMKTRLDDKPDFTTLQGGKVLVDQPGFSNLCVTKQEYDEYG 367
BLAST of CN186434 vs. ExPASy Swiss-Prot
Match: ARP6_DROME (Actin-like protein 13E OS=Drosophila melanogaster GN=Actr13E PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.530e-16 Identity = 38/121 (31.40%), Postives = 70/121 (57.85%), Query Frame = -1 Query: 336 QIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESG 698 Q++++ ERF PE+LF PS IG++ GI E + + C + ++L NI++ GGS FPG R+ +++ AL P +++ ++ P + W GG +A+ F++ ++ +Y+E G Sbjct: 271 QMVSLCNERFTVPELLFNPSDIGVQQVGIPEAVADCLKACPWEAHRELLLNILIVGGSAQFPGFLPRLKRDLRALVPDDLEVSLICPEDPVRYAWYGGKEVATSPNFEEFVYTQDDYEEYG 391
BLAST of CN186434 vs. ExPASy Swiss-Prot
Match: ARP3_ACACA (Actin-related protein 3 OS=Acanthamoeba castellanii GN=ARP3 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.609e-16 Identity = 47/139 (33.81%), Postives = 73/139 (52.52%), Query Frame = -1 Query: 327 ITIGAERFRCPEVLFQPSLIGME-AAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMK----------------IKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSI 692 + +G ERF PE+ F P + + + + +I C +D R+ LY NIVLSGGSTMF R+ ++I +K +KV++ ++++VW GGS+LAS F ++ +K +YDE GPSI Sbjct: 277 VDVGYERFLGPEIFFNPEIFSSDFLTPLPKVVDETIQSCPIDTRRGLYKNIVLSGGSTMFKDFGKRLQRDIKRAVDYRIKRSEELSQGRIKSKAVDVKVISHHMQRFAVWFGGSMLASTPEFYKVCHTKQQYDEVGPSI 415
BLAST of CN186434 vs. ExPASy Swiss-Prot
Match: ARP5_ORYSJ (Actin-related protein 5 OS=Oryza sativa subsp. japonica GN=ARP5 PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 7.591e-16 Identity = 44/127 (34.65%), Postives = 71/127 (55.91%), Query Frame = -1 Query: 318 ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKC--DVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHR 692 I+IG ERFRCPE+LFQP +IG++ AGI E S+ + D +++ L +I+++GG ++ PG+ R+ I P +K+V + W G + A+ S F + S +Y E G ++ HR Sbjct: 442 ISIGIERFRCPEILFQPGMIGIDQAGIDEMVSISLRRLMEDEAVKERLCQSILVTGGCSLIPGMIPRLESGIRQFRPYLSPLKLVRAADPLIDAWRGAAAFAASSKFGRHTFSLADYREHGENLFHR 568
BLAST of CN186434 vs. ExPASy Swiss-Prot
Match: ARP5_ORYSI (Actin-related protein 5 OS=Oryza sativa subsp. indica GN=ARP5 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 7.591e-16 Identity = 44/127 (34.65%), Postives = 71/127 (55.91%), Query Frame = -1 Query: 318 ITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKC--DVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSIVHR 692 I+IG ERFRCPE+LFQP +IG++ AGI E S+ + D +++ L +I+++GG ++ PG+ R+ I P +K+V + W G + A+ S F + S +Y E G ++ HR Sbjct: 442 ISIGIERFRCPEILFQPGMIGIDQAGIDEMVSISLRRLMEDEAVKERLCQSILVTGGCSLIPGMIPRLESGIRQFRPYLSPLKLVRAADPLIDAWRGAAAFAASSKFGRHTFSLADYREHGENLFHR 568
BLAST of CN186434 vs. ExPASy Swiss-Prot
Match: ARP8_ORYSJ (Actin-related protein 8 OS=Oryza sativa subsp. japonica GN=ARP8 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.914e-16 Identity = 49/152 (32.24%), Postives = 84/152 (55.26%), Query Frame = -1 Query: 321 AKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKC---DVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPS--SMKIKVVAPPERKYSVWIGGSILASLSTFQQMW-ISKGEYDE----SGPSIVH 746 A+ + + E+ T+ ERF+ E+LFQP + G+ A G+H+ + C +V + Y +VLSGGS+ PG+++R+ KE+ L P+ S I+V+ PP S W G +++++STF + W I K ++ + +GPS V+ Sbjct: 331 AEKRKDTQASCEVDGEGWFTLSEERFKTAEILFQPQIGGVRAMGLHKAVSLCMDHCYNSEVFGDDNWYKTVVLSGGSSCLPGLSERLEKELRELLPAHISEGIRVIPPPFGTDSAWFGAKMISNVSTFTEAWCIKKKQFRQKTRRNGPSFVN 482
BLAST of CN186434 vs. ExPASy Swiss-Prot
Match: ARP8_ORYSI (Actin-related protein 8 OS=Oryza sativa subsp. indica GN=ARP8 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.914e-16 Identity = 49/152 (32.24%), Postives = 84/152 (55.26%), Query Frame = -1 Query: 321 AKSSSSVEKNYELPDGQIITIGAERFRCPEVLFQPSLIGMEAAGIHETTYNSIMKC---DVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPS--SMKIKVVAPPERKYSVWIGGSILASLSTFQQMW-ISKGEYDE----SGPSIVH 746 A+ + + E+ T+ ERF+ E+LFQP + G+ A G+H+ + C +V + Y +VLSGGS+ PG+++R+ KE+ L P+ S I+V+ PP S W G +++++STF + W I K ++ + +GPS V+ Sbjct: 331 AEKRKDTQASCEVDGEGWFTLSEERFKTAEILFQPQIGGVRAMGLHKAVSLCMDHCYNSEVFGDDNWYKTVVLSGGSSCLPGLSERLEKELRELLPAHISEGIRVIPPPFGTDSAWFGAKMISNVSTFTEAWCIKKKQFRQKTRRNGPSFVN 482
BLAST of CN186434 vs. ExPASy Swiss-Prot
Match: ARP3_DICDI (Actin-related protein 3 OS=Dictyostelium discoideum GN=arpC PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.295e-15 Identity = 46/137 (33.58%), Postives = 71/137 (51.82%), Query Frame = -1 Query: 327 IGAERFRCPEVLFQPSLIGME-AAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMK----------------IKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSI 686 +G ERF PE+ F P + + + + ++I C +D R+ LY NIVLSGGSTMF R+ +++ +K + V++ ++Y+VW GGS+LAS F + +K +YDE GPSI Sbjct: 271 VGYERFLGPELFFNPEIASSDYLTPLPKVVDDTIQSCPIDCRRGLYKNIVLSGGSTMFKDFGKRLQRDVKRSVDYRIKRSEELSGGKIKAVPLAVNVISHNMQRYAVWFGGSMLASTPEFYNVCHTKAQYDEIGPSI 407
BLAST of CN186434 vs. ExPASy Swiss-Prot
Match: ARP3_ORYSJ (Actin-related protein 3 OS=Oryza sativa subsp. japonica GN=ARP3 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.209e-15 Identity = 47/137 (34.31%), Postives = 71/137 (51.82%), Query Frame = -1 Query: 327 IGAERFRCPEVLFQPSLIGME-AAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSM----------------KIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSI 686 IG ERF PE+ F P + + +H I +D R+ LY NIVLSGGSTMF R+ +++ + + + ++ VV+ P ++Y+VW GGS+LAS + F + +K EY+E G SI Sbjct: 281 IGYERFLGPEIFFHPEIYNNDFTTPLHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASNARLGGDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASI 417
BLAST of CN186434 vs. ExPASy Swiss-Prot
Match: ARP3_ORYSI (Actin-related protein 3 OS=Oryza sativa subsp. indica GN=ARP3 PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.209e-15 Identity = 47/137 (34.31%), Postives = 71/137 (51.82%), Query Frame = -1 Query: 327 IGAERFRCPEVLFQPSLIGME-AAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSM----------------KIKVVAPPERKYSVWIGGSILASLSTFQQMWISKGEYDESGPSI 686 IG ERF PE+ F P + + +H I +D R+ LY NIVLSGGSTMF R+ +++ + + + ++ VV+ P ++Y+VW GGS+LAS + F + +K EY+E G SI Sbjct: 281 IGYERFLGPEIFFHPEIYNNDFTTPLHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASNARLGGDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASI 417 The following BLAST results are available for this feature:
BLAST of CN186434 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 479
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186434 ID=CN186434; Name=CN186434; organism=Citrus sinensis; type=EST; length=755bpback to top |