CN186433
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: TCPG_RAT (T-complex protein 1 subunit gamma OS=Rattus norvegicus GN=Cct3 PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.810e-20 Identity = 61/191 (31.94%), Postives = 104/191 (54.45%), Query Frame = 1 Query: 34 RKHVNLD-LIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGK-AGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRG 600 RK +++ +VE GG +ED+ ++ G+ ++KD++HP+M + I+N +I +L E K +++ ++I E F + Q E++Y + + + +VI + G D A H LM N+ A+R V + IA A G RIV R +EL + +G AGL+ K G + +I C + +A TI +RG Sbjct: 190 RKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIG--DEYFTFITDCKDPKACTILLRG 378
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: THSG_SULSH (Thermosome subunit gamma OS=Sulfolobus shibatae GN=thsC PE=3 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.364e-20 Identity = 64/204 (31.37%), Postives = 109/204 (53.43%), Query Frame = 1 Query: 7 AVLAVADLERKHVNLDL--IKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGRIM 612 A LAV D +LD+ IK+ GG +D+EL+ GI VDK+ ++ MPKR EN K+ + P + K + K+ I + + ++ Y MV K K +G L I Q D+ A++L+ + A++ V ++EL++ ATG +I ++ LG+A LV ++ G +++ L+I+ ++AVT+ I+G M Sbjct: 175 ASLAVLDKRDGTYDLDIKNIKIVKVNGGEFDDSELVNGIVVDKEPTNENMPKRAENVKVMLADFPLKLEKTEISMKLGISDPTQIKGYLDEQTAYVKQMVDKIKAMGVKLFITQKDIDEVASYLMGKSGIIALKNVKRSDIELLSRATGAKIASSMKDANESDLGEAKLVEVRNLG--KNKYLFIQ-SDKAKAVTVIIKGSNNM 375
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: TCPG_MOUSE (T-complex protein 1 subunit gamma OS=Mus musculus GN=Cct3 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.364e-20 Identity = 61/191 (31.94%), Postives = 104/191 (54.45%), Query Frame = 1 Query: 34 RKHVNLD-LIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGK-AGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRG 600 RK +++ +VE GG +ED+ ++ G+ ++KD++HP+M + I+N +I +L E K +++ ++I E F + Q E++Y + + + +VI + G D A H LM N+ A+R V + IA A G RIV R +EL + +G AGL+ K G + +I C + +A TI +RG Sbjct: 190 RKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIG--DEYFTFITDCKDPKACTILLRG 378
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: TCPG_THAWE (T-complex protein 1 subunit gamma OS=Thalassiosira weissflogii PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.532e-19 Identity = 57/182 (31.32%), Postives = 94/182 (51.65%), Query Frame = 1 Query: 61 KVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGK-AGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGG 603 KVE GG + D ++ G+ +KD++H +M +RIEN +I +L P E K +++ V+I E + TL + E++Y ++M + +VI + G D A H N+ A R + + +A ATG IV R E+ +G GL + G ++ + E C + +A TI +RGG Sbjct: 215 KVEKIPGGEISDCAVLSGVMFNKDVTHSKMRRRIENPRILLLDTPLEYKKGESQTNVEITDEEDWNTLLKMEEEYVENMCMEIIAFKPDIVITEKGVSDLAQHYFAKANITAFRRLRKTDNNRVARATGATIVSRTDEIRESDIGTGCGLFEMRKIG--EEYFAFFEECKDPKACTIILRGG 394
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: TCPG_YEAST (T-complex protein 1 subunit gamma OS=Saccharomyces cerevisiae GN=CCT3 PE=1 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 4.457e-19 Identity = 55/183 (30.05%), Postives = 98/183 (53.55%), Query Frame = 1 Query: 58 IKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLG-KAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGG 603 ++VE GG + D+ ++ G+ ++KD+ HP+M + IEN ++ +L CP E K +++ ++I+ E + + Q E++ M ++ V TLVI + G D A H L+ +R V + IA TG IV R ++L +G GL + + G + ++++C +A TI +RGG Sbjct: 204 VRVEKIPGGDVLDSRVLKGVLLNKDVVHPKMSRHIENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGGCSVLRRVKKSDNNRIARVTGATIVNRVEDLKESDVGTNCGLFKVEMIG--DEYFSFLDNCKEPKACTIMLRGG 384
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: TCPG_DROME (T-complex protein 1 subunit gamma OS=Drosophila melanogaster GN=Cctgamma PE=2 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 4.928e-18 Identity = 62/202 (30.69%), Postives = 103/202 (50.99%), Query Frame = 1 Query: 7 AVLAVADLERKHVNLDL---IKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGK-AGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRG 600 AV V E + +D+ KVE GG +E++ ++ G+ ++KD++HP+M + IEN +I +L C E K +++ V+I + F + Q E+++ + V LV + G D A H L+ + A+R + + IA A G IV R +ELT + +G AGL K G + ++ C +A TI +RG Sbjct: 181 AVETVTLSENGRLEVDIKRYAKVEKIPGGAIEESCVLKGVMINKDVTHPKMRRLIENPRIVLLDCSLEYKKGESQTNVEIIGEQDFTRMLQIEEEFVQRICADIIAVKPDLVFTEKGVSDLAQHYLLKAGITAIRRLRKTDNLRIARACGATIVNRTEELTEKDVGTGAGLFEVKKIG--DEYFTFVTECKEPKACTILLRG 380
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: TCPW_HUMAN (T-complex protein 1 subunit zeta-2 OS=Homo sapiens GN=CCT6B PE=1 SV=4) HSP 1 Score: 90.8929 bits (224), Expect = 8.406e-18 Identity = 60/193 (31.09%), Postives = 101/193 (52.33%), Query Frame = 1 Query: 49 LDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDV---------GATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRG 600 +++++++ K+G DT+LI G+ +D HP M KR+E+A I I E K + T E+ + L + E+K+ +D VQK D+ +VI Q G D + L + A+R +E +++A GG V F++LT + LG AGLV E + G +++ +IE C N +VT+ ++G Sbjct: 191 VEIMEMKHKLG---TDTKLIQGLVLDHGARHPDMKKRVEDAFILICNVSLEYEKTEVNSGFFYKTAEEKEKLVKAERKFIEDRVQKIIDLKDKVCAQSNKGFVVINQKGIDPFSLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSFEDLTVDCLGHAGLVYEYTLG--EEKFTFIEECVNPCSVTLLVKG 378
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: TCPW_MOUSE (T-complex protein 1 subunit zeta-2 OS=Mus musculus GN=Cct6b PE=2 SV=4) HSP 1 Score: 90.1225 bits (222), Expect = 1.434e-17 Identity = 66/206 (32.04%), Postives = 105/206 (50.97%), Query Frame = 1 Query: 16 AVADLERKHVNLDLIKVE-GKVGGRLE-DTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDV---------GATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRG 600 +V + R V +DL VE ++ + E DT+LI G+ +D HP+M K++ +A I E K + TVE+ + L + E+K+ +D VQK D+ +VI Q G D + +L N+ A+R LE + +A GG V F+ L+ E LG AGLV E + G +++ +IE C N +VT+ ++G Sbjct: 175 SVLAIRRPGVPIDLFMVEIVEMRHKSETDTQLIRGLVLDHGARHPRMRKQVRDAYILTCNVSLEYEKTEVSSGFFYKTVEEKEKLVKAERKFIEDRVQKIIDLKQKVCAESNKGFVVINQKGIDPVSLEMLAKHNIVALRRAKRRNLERLTLACGGLAVNSFEGLSEECLGHAGLVFEYALG--EEKFTFIEDCVNPLSVTLLVKG 378
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: TCPG_SCHPO (T-complex protein 1 subunit gamma OS=Schizosaccharomyces pombe GN=cct3 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.434e-17 Identity = 60/202 (29.70%), Postives = 101/202 (50.00%), Query Frame = 1 Query: 7 AVLAVADLERKHVNLDL---IKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGK-AGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRG 600 AV VA + +D+ +VE GG +E + ++ G+ ++KD++HP+M +RIEN +I +L CP E K +++ ++I + + + E++ M V LVI + G D A H L+ N+ A+R + IA A G IV R ++L + +G GL G + ++ C N +A TI +RG Sbjct: 177 AVRTVASTSNGRMEIDIKRYARVEKVPGGEIESSCVLDGVMLNKDVTHPKMRRRIENPRIVLLDCPLEYRKGESQTNIEISKDTDWNRILEIEEEQVKRMCDYIIAVKPDLVITEKGVSDLAQHYLLKANITALRRTRKSDNNRIARACGANIVNRLEDLREKDVGTGCGLFYIDKLG--DEYYTFLTGCKNPKACTILLRG 376
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: TCPG_DICDI (T-complex protein 1 subunit gamma OS=Dictyostelium discoideum GN=cct3 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 7.116e-17 Identity = 54/181 (29.83%), Postives = 89/181 (49.17%), Query Frame = 1 Query: 61 KVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGK-AGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRG 600 KVE GG + D +I G+ ++KD++HP+M + I+N +I +L C E K ++ VDI + F L + E++Y + + + LV + G D A H + + + +R + E IA +G IV R EL +G GL + G + ++E C +A TI +RG Sbjct: 199 KVEKIPGGDISDCRVIRGVMLNKDVTHPKMKRMIKNPRIVLLDCSLEYKKGESDTMVDITNEDDFSALLKIEEEYVQRICEDIIKLKPDLVFTEKGVSDLAQHFFVKKGITCLRRLKKSENNRIARISGATIVSRTDELQESDIGTGCGLFEIRKIG--DEYFTFLEDCKEPKACTILLRG 377 The following BLAST results are available for this feature:
BLAST of CN186433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186433 ID=CN186433; Name=CN186433; organism=Citrus sinensis; type=EST; length=769bpback to top |