CN186433
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: THS2_HALVO (Thermosome subunit 2 OS=Halobacterium volcanii GN=cct2 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.585e-16 Identity = 51/187 (27.27%), Postives = 89/187 (47.59%), Query Frame = 1 Query: 43 VNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANS-RAVTIFIRG 600 V+L+ + +E + G ++EL+ G +DKD H MP + + A + +L P E + V I++ ++ Q QE+ V + D GA +V CQ G DD A H L + + AVR ++ + TG +V + LG+A + R+++ + Y+E + VT+ +RG Sbjct: 198 VDLENVSIETQTGRSASESELLTGAVIDKDPVHDDMPVQFDEADVLLLNEPVEVEETDIDTNVSIESPDQLQKFLDQEEAQLKQKVDQIVDSGADVVFCQKGIDDLAQHYLAKQGILAVRRTKKSDIRFLKNITGAAVVSDLDSIEAAVLGRASVRRDEA-----GELFYVEGIGDDVHGVTLLLRG 379
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: TCPZ_PONAB (T-complex protein 1 subunit zeta OS=Pongo abelii GN=CCT6 PE=2 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 2.071e-16 Identity = 57/178 (32.02%), Postives = 90/178 (50.56%), Query Frame = 1 Query: 94 DTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQK--------CKDVG-ATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRG 600 DT LI G+ +D HP M KR+E+A I E K + + E+ + L + E+K+ +D V+K C D +VI Q G D + L + A+R +E + +A GG + F +L+P++LG AGLV E + G +++ +IE C N R+VT+ I+G Sbjct: 203 DTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPFSLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDQLGHAGLVYEYTLG--EEKFTFIEKCNNPRSVTLLIKG 378
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: TCPZ_MOUSE (T-complex protein 1 subunit zeta OS=Mus musculus GN=Cct6a PE=1 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 2.071e-16 Identity = 63/206 (30.58%), Postives = 102/206 (49.51%), Query Frame = 1 Query: 16 AVADLERKHVNLDLIKVE-GKVGGRLE-DTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQK--------CKDVG-ATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRG 600 ++ + +K +DL VE ++ + E DT LI G+ +D HP M KR+ENA I E K + + E+ + L + E+K+ +D V+K C D +VI Q G D + L + A+R +E + +A GG + F +L P+ LG AGLV E + G +++ +IE C N R+VT+ ++G Sbjct: 175 SILAIRKKDEPIDLFMVEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVENAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEGIVALRRAKRRNMERLTLACGGIALNSFDDLNPDCLGHAGLVYEYTLG--EEKFTFIEKCNNPRSVTLLVKG 378
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: TCPZ_CHICK (T-complex protein 1 subunit zeta OS=Gallus gallus GN=CCT6 PE=1 SV=3) HSP 1 Score: 85.8853 bits (211), Expect = 2.704e-16 Identity = 57/178 (32.02%), Postives = 88/178 (49.44%), Query Frame = 1 Query: 94 DTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDV---------GATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRG 600 DT LI G+ +D HP M KR+E+A I E K + + E+ + L + E+K+ +D V K D+ +VI Q G D + L + A+R +E + +A GG + ++LTP+ LG AGLV E + G +++ +IE C N R+VT+ IRG Sbjct: 202 DTTLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVSAGFFYKSAEEREKLVKAERKFIEDRVSKIIDLKRRVCGDSDKGFIVINQKGIDPFSLDALAKEGIVALRRAKRRNMERLTLACGGTAMNSVEDLTPDCLGHAGLVYEYTLG--EEKYTFIEKCDNPRSVTLLIRG 377
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: TCPD_SCHPO (T-complex protein 1 subunit delta OS=Schizosaccharomyces pombe GN=cct4 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 3.532e-16 Identity = 61/211 (28.91%), Postives = 111/211 (52.61%), Query Frame = 1 Query: 7 AVLAVADLERKHVNLDL--IKVEGKVGGRLEDTELIYGITVDKD-MSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGF-----DDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANS-RAVTIFIRGGRIM 612 AVL V D R N+DL I++ K+GG ++DTELI G+ + + + P RIE A IA++ PPKP +++V ++ + + ++E++Y +M +K K GA +++ Q +D A H L + ++ + E+E I +TG + + + +KLG A LV E S ++ ++++ N+ + V+I RG ++ Sbjct: 177 AVLKVID-PRVATNVDLKDIRIVKKLGGIIDDTELIPGLALTQTAVKSAGGPTRIEKANIALIQFQLSPPKPDMENQVVVNDYRQMDKILKEERQYLLNMCKKIKKAGANVILIQKSILRDAVNDLALHFLAKLKIMVIKDIERDEVEFICKSTGCKPIADIESFAEDKLGHADLVEETS--SSGEKIVKFSGVKNAGKTVSILCRGANLL 384
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: THSB_HALSA (Thermosome subunit beta OS=Halobacterium salinarium GN=thsB PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 4.613e-16 Identity = 48/182 (26.37%), Postives = 87/182 (47.80%), Query Frame = 1 Query: 58 IKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIE-HCANSRAVTIFIRG 600 I +E + G + +++L+ G + KD H QMP +E+A + +L E + + V+I++ ++ Q+ QE+K + VQ+ D GA +V CQ G DD A H L + AVR ++E + +V + + + R+ + D + Y+E + VT+ +RG Sbjct: 204 INIETQTGHGVNESQLLRGAAISKDPVHDQMPAAVEDADVLLLNEAIEVEEAEADTSVNIESPDQLQSFLDQEEKQLKEKVQQIADTGANVVFCQKGIDDMAQHYLAKEGILAVRRTKKSDIEFLTNVLDASVVTDLDAASEADVVAGSVTRD-----SDDELFYVEGESEQAHGVTLLLRG 380
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: TCPZ_HUMAN (T-complex protein 1 subunit zeta OS=Homo sapiens GN=CCT6A PE=1 SV=3) HSP 1 Score: 84.7297 bits (208), Expect = 6.024e-16 Identity = 57/178 (32.02%), Postives = 89/178 (50.00%), Query Frame = 1 Query: 94 DTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQK--------CKDVG-ATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRG 600 DT LI G+ +D HP M KR+E+A I E K + + E+ + L + E+K+ +D V+K C D +VI Q G D + L + A+R +E + +A GG + F +L+P+ LG AGLV E + G +++ +IE C N R+VT+ I+G Sbjct: 203 DTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPFSLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDCLGHAGLVYEYTLG--EEKFTFIEKCNNPRSVTLLIKG 378
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: TCPG_OXYGR (T-complex protein 1 subunit gamma OS=Oxytricha granulifera PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.024e-16 Identity = 62/204 (30.39%), Postives = 101/204 (49.51%), Query Frame = 1 Query: 7 AVLAVADLERKHVNLDL---IKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKF-QTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANH-LLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLG-KAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRG 600 AV +V E +V +D+ KVE GG LE++ ++ G+ +KD++HP M + IEN ++ +L CP E K ++ ++ E F + L +E++ + V +VI + G D A H LL + N +R + + IA TG I R +EL +G K GL K G + ++ C N +A +I +RG Sbjct: 179 AVKSVYKKEGDYVEIDVKRYAKVEKIPGGLLEESVVLDGVMFNKDVTHPGMRRYIENPRVVLLDCPLEYKKGESMTNMEFTKEEDFKKALMMEEEEVKKMCAEDILRVKPDVVITEKGVSDTAQHFLLKYGNCTVIRRIRKTDNNRIARVTGATIANRPEELQESDVGTKCGLFEIKKIG--DEYFSFMTKCENPKACSILLRG 380
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: TCPG_ENCCU (T-complex protein 1 subunit gamma OS=Encephalitozoon cuniculi GN=CCT3 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.024e-16 Identity = 49/182 (26.92%), Postives = 93/182 (51.10%), Query Frame = 1 Query: 58 IKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLG-KAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRG 600 +KVE +GG L ++E++ G+ ++KD+ HPQM + IEN +I I+ P E K +++ + F + E++ +M ++ V +V+C+ G D A +L N+ +R + ++ ++ G R V R ++L +G GL +G ++ CA+ +A ++ IRG Sbjct: 194 MKVEKVLGGNLMESEVVDGVLINKDIIHPQMRRVIENPRIVIIESPLEYKKGESQTNYEFSKENDFTRALEIEEEQVREMCERIIGVRPDIVVCEKGISDLALSILFENNITGLRRLKKTDISRLSKVCGARSVSRPEDLEERHVGVSCGLFEYIKYG--EEYYCKFSRCAHPKACSVVIRG 373
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: TCPW_BOVIN (T-complex protein 1 subunit zeta-2 OS=Bos taurus GN=CCT6B PE=2 SV=3) HSP 1 Score: 83.5741 bits (205), Expect = 1.342e-15 Identity = 62/206 (30.10%), Postives = 104/206 (50.49%), Query Frame = 1 Query: 16 AVADLERKHVNLDLIKVE-GKVGGRLE-DTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDV---------GATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRG 600 +V + R + +DL VE ++ + E DT+LI G+ +D HP M KR+++A I E K + T E+ + L + E+K+ +D VQK D+ +VI Q G D + L + A+R +E +++A GG V ++L+ + LG AGLV E + G +++ +IE C N R+VT+ ++G Sbjct: 175 SVLAIRRPNYPIDLFMVEIMEMKHKSETDTKLIKGLVLDHGARHPDMKKRVDDAFILTCNVSLEYEKTEVSSGFFYKTAEEKEKLVKAERKFIEDRVQKIIDLKDKVCAQSNKGFVVINQKGIDPFSLDALAKHGILALRRAKRRNMERLSLACGGVAVNSVEDLSVDCLGHAGLVYEYTLG--EEKYTFIEDCINPRSVTLLVKG 378 The following BLAST results are available for this feature:
BLAST of CN186433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186433 ID=CN186433; Name=CN186433; organism=Citrus sinensis; type=EST; length=769bpback to top |