CN186433
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: TCPD_KLULA (T-complex protein 1 subunit delta OS=Kluyveromyces lactis GN=CCT4 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.531e-14 Identity = 52/208 (25.00%), Postives = 109/208 (52.40%), Query Frame = 1 Query: 10 VLAVADLERKHVNLDLIKVEGKVGGRLEDTELIYGITVDKD-MSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGF-----DDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVRE-KSFGTTQDRMLYIEHCANSRAVTIFIRGGRIM 612 VL++A + +V+L+ I++ KVGG ++DTE++ G+ + ++ + P RIE A+I ++ PPKP T++ + ++ + + ++E+ Y ++ +K K +++ Q +D A H L + VR + E+E ++ + G + + + T ++LG A +V E +S G+ + ++ + V++ IRG M Sbjct: 180 VLSIASHDSTNVDLNDIRLIKKVGGTIDDTEMVNGVVLTQNAVKTAGGPTRIEKARIGLIQFQISPPKPDTENNIVVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLGIMVVRDIERDEVEFLSKSLGCKPISDVELFTEDRLGSADVVEEVESDGSNIVTITGVKTTNKNPTVSVVIRGANNM 387
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: TCPZ_YEAST (T-complex protein 1 subunit zeta OS=Saccharomyces cerevisiae GN=CCT6 PE=1 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.306e-14 Identity = 52/208 (25.00%), Postives = 101/208 (48.56%), Query Frame = 1 Query: 7 AVLAVADLERKHVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDV----------GATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRG 600 AVL+V D + +++L ++++ +DT I G+ +D HP MP R++NA + IL E K + + ++ L E+K+ D ++K D+ ++I Q G D + + N+ A+R +E + + TGG ++L+P+ LG +GLV +++ G +++ Y+ + ++ TI I+G Sbjct: 177 AVLSVYDAQADNLDLHMVEIMQMQHLSPKDTTFIKGLVLDHGGRHPDMPTRVKNAYVLILNVSLEYEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNILALRRAKRRNMERLQLVTGGEAQNSVEDLSPQILGFSGLVYQETIG--EEKFTYVTENTDPKSCTILIKG 382
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: TCPD_DEBHA (T-complex protein 1 subunit delta OS=Debaryomyces hansenii GN=CCT4 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.317e-14 Identity = 47/176 (26.70%), Postives = 95/176 (53.98%), Query Frame = 1 Query: 7 AVLAVADLERKHVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHPQM-PKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGF-----DDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVRE 516 +VL V + E +V+L+ I++ KVGG +++TEL+ G+ + +++ P R++ AKIA++ PPKP ++ V ++ + + ++E+ Y ++ +K K +++ Q +D A H L N+ ++ + E+E ++ ATG + + T ++LG A +V E Sbjct: 182 SVLKVMNEEHTNVDLNDIRLIKKVGGTIDETELVNGVVLTQNVVKTAGGPVRVDKAKIALIQFQLSPPKPDMENNVVVNDYRQMDKILKEERAYLLNICKKIKKSKCNVLLIQKSILRDAVNDLALHFLSKLNIMVIKDIERDEIEFLSKATGCKPIADIDNFTEDRLGSADVVEE 357
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: TCPH_MOUSE (T-complex protein 1 subunit eta OS=Mus musculus GN=Cct7 PE=1 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.364e-14 Identity = 51/194 (26.29%), Postives = 87/194 (44.85%), Query Frame = 1 Query: 43 VNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHP---QMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGRIMF 615 + L +I ++ GG LE+++L+ G+ K S+ PK+ +N KIA+L E K ++ + TVE +Q + E D ++K GA +++ + D A R++ V +L+ +A GG I L P+ LG + E G +R + C ++ TI +RGG F Sbjct: 190 LQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYKNPKIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHQSGAKVILSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALVPDVLGHCQVFEETQIG--GERYNFFTGCPKAKTCTIILRGGAEQF 381
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: TCPD_CANGA (T-complex protein 1 subunit delta OS=Candida glabrata GN=CCT4 PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.364e-14 Identity = 56/212 (26.42%), Postives = 104/212 (49.06%), Query Frame = 1 Query: 7 AVLAVADLERKHVNLDLIKVEGKVGGRLEDTELIYGI----TVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGF-----DDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVRE-KSFGTTQDRMLYIEHCANSRAVTIFIRGGRIM 612 AVL++ + + K V+L+ I++ KVGG + DTE++ G+ TV K P M E AKI ++ PPKP T++ + + + + ++E+ Y ++ +K K +++ Q +D A H L + ++ + E+E ++ + G + + + T ++LG A LV E S GT + ++ V++ IRG M Sbjct: 178 AVLSITEKDSKTVDLNDIRLVKKVGGTIGDTEMVDGVVLTQTVVKTAGGPTMK---EKAKIGLIQFQISPPKPDTENNIVVSDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLAKLGIMVIKDIEREEIEFLSKSLGCKPISDVELFTEDRLGSADLVEEIDSDGTKIVKFSGVKGVNAKPTVSVIIRGANSM 386
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: TCPZ_CAEEL (T-complex protein 1 subunit zeta OS=Caenorhabditis elegans GN=cct-6 PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.256e-13 Identity = 52/182 (28.57%), Postives = 85/182 (46.70%), Query Frame = 1 Query: 94 DTELIYGITVDKDMSHPQMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATL-------------VICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRG 600 DT L+ G+ +D HP MP+ +++A I E K + + T ++ + L E+++ V K ++ + VI Q G D + LL + A+R +E + +A GG V +LTPE LG AGLV E S G +++ +IE C ++VT+ I+G Sbjct: 203 DTTLVRGLVLDHGARHPDMPRHVKDAYILTCNVSLEYEKTEVNSGLFYKTAKEREALLAAEREFITRRVHKIIELKKKVIDNSPDGKNKGFVVINQKGIDPPSLDLLASEGILALRRAKRRNMERLQLAVGGEAVNSVDDLTPEDLGWAGLVYEHSLG--EEKYTFIEECRAPKSVTLLIKG 382
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: TCPH_HUMAN (T-complex protein 1 subunit eta OS=Homo sapiens GN=CCT7 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.256e-13 Identity = 55/206 (26.70%), Postives = 92/206 (44.66%), Query Frame = 1 Query: 7 AVLAVADLERKHVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHP---QMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGRIMF 615 AV+ + DL + L +I ++ GG LED++L+ G+ K S+ PK+ N KIA+L E K ++ + TVE +Q + E D ++K GA +V+ + D A R++ V +L+ +A GG I L+ + LG+ + E G +R + C ++ T +RGG F Sbjct: 182 AVMMLDDL----LQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIG--GERYNFFTGCPKAKTCTFILRGGAEQF 381
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: TCPH_PONAB (T-complex protein 1 subunit eta OS=Pongo abelii GN=CCT7 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.641e-13 Identity = 54/206 (26.21%), Postives = 92/206 (44.66%), Query Frame = 1 Query: 7 AVLAVADLERKHVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHP---QMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGRIMF 615 AV+ + DL + L +I ++ GG LED++L+ G+ K S+ PK+ N K+A+L E K ++ + TVE +Q + E D ++K GA +V+ + D A R++ V +L+ +A GG I L+ + LG+ + E G +R + C ++ T +RGG F Sbjct: 182 AVMMLDDL----LQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKVALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIG--GERYNFFTGCPKAKTCTFILRGGAEQF 381
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: TCPH_TETTH (T-complex protein 1 subunit eta (Fragment) OS=Tetrahymena thermophila PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.143e-13 Identity = 52/205 (25.37%), Postives = 93/205 (45.37%), Query Frame = 1 Query: 10 VLAVADLERKHVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHP---QMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGRIMF 615 V AV LE ++ DLI ++ GG + D+ L+ G+ K S+ Q PK+ N KI +L E K ++ I+ + ++++ E + + ++K + GA +V+ + D A RN+ V +++ + +TG + LT + LG E G +R + C +S++ TI +RGG F Sbjct: 121 VQAVETLETNLLDKDLIGIKMVTGGSVTDSFLVSGVAFKKTFSYAGFEQQPKKFNNPKICLLNIELELKAEKENAEIRIENPDDYKSIVDAEWELIYEKLRKIVESGANIVLSKLPIGDLATQYFADRNIFCAGRVDAEDMKRVQKSTGAIVQTTVNGLTEDVLGTCNQFEEVQIGA--ERYNLFKDCPHSKSATIILRGGAEQF 323
BLAST of CN186433 vs. ExPASy Swiss-Prot
Match: TCPH_SCHPO (Probable T-complex protein 1 subunit eta OS=Schizosaccharomyces pombe GN=cct7 PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.773e-13 Identity = 52/203 (25.62%), Postives = 89/203 (43.84%), Query Frame = 1 Query: 16 AVADLERKHVNLDLIKVEGKVGGRLEDTELIYGITVDKDMSHP---QMPKRIENAKIAILTCPFEPPKPKTKHKVDIDTVEKFQTLRQQEQKYFDDMVQKCKDVGATLVICQWGFDDEANHLLMHRNLPAVRWVGGVELELIAIATGGRIVPRFQELTPEKLGKAGLVREKSFGTTQDRMLYIEHCANSRAVTIFIRGGRIMF 615 AV L+++ +N ++I ++ GG +ED+ L+ G+ K S+ Q PK +N KI L E K +V +D V+++Q + E + ++ GA +V+ + D A R++ V +L + A GG I + + LG E+ G DR E C ++ T+ +RGG F Sbjct: 186 AVLTLDQEDLNENMIGIKKVPGGAMEDSLLVKGVAFKKTFSYAGFEQQPKFFKNPKILCLDVELELKAEKDNAEVRVDKVQEYQNIVDAEWRIIFSKLEAIVATGAKVVLSKLPIGDLATQYFADRDIFCAGRVAADDLNRVVQAVGGSIQSTCSNIEEKHLGTCDTFEERQIGG--DRFNLFEGCPKAKTCTLILRGGADQF 386 The following BLAST results are available for this feature:
BLAST of CN186433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 109
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186433 ID=CN186433; Name=CN186433; organism=Citrus sinensis; type=EST; length=769bpback to top |