CN186432
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186432 vs. ExPASy Swiss-Prot
Match: TCPG_MACFA (T-complex protein 1 subunit gamma OS=Macaca fascicularis GN=CCT3 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.226e-17 Identity = 47/145 (32.41%), Postives = 84/145 (57.93%), Query Frame = -3 Query: 200 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 634 +K ++ E +R++ DA+ V RN++ + +V GGGA+E+A + A+ + GVEQ+ RA A AL+ IP L +N G I L++++ + +EN G++ D++E ++E L K Q A + ++L+IDD++S Sbjct: 380 SKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDVKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVS 524
BLAST of CN186432 vs. ExPASy Swiss-Prot
Match: THSA_SULSO (Thermosome subunit alpha OS=Sulfolobus solfataricus GN=thsA PE=3 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 4.213e-17 Identity = 56/148 (37.84%), Postives = 86/148 (58.11%), Query Frame = -3 Query: 200 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVG---TNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 634 N M ++E +RSI+DAL RN++ I+ GGGA E+ ++ + A G EQ AI AFADAL+ IP+ LAE +GL+ I +L ++ + + N G+D +G +D+ N+ E + K Q + AT+ ILKIDD+I+ Sbjct: 385 NDMALDEAERSINDALHALRNILLEPVILPGGGAIELELAMKLREYARSVGGKEQLAIEAFADALEEIPLILAETAGLEAISSLMDLRARHAK-GLSNTGVDV--IGGKIVDDVYALNIIEPIRVKSQVLKSATEAATAILKIDDLIA 529
BLAST of CN186432 vs. ExPASy Swiss-Prot
Match: TCPG_MOUSE (T-complex protein 1 subunit gamma OS=Mus musculus GN=Cct3 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.213e-17 Identity = 47/145 (32.41%), Postives = 84/145 (57.93%), Query Frame = -3 Query: 200 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 634 +K ++ E +R++ DA+ V RN++ + +V GGGA+E+A + A+ + GVEQ+ RA A AL+ IP L +N G I L++++ + +E+ G++ DM+E ++E L K Q A + ++L+IDD++S Sbjct: 380 SKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQESCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVS 524
BLAST of CN186432 vs. ExPASy Swiss-Prot
Match: TCPD_YARLI (T-complex protein 1 subunit delta OS=Yarrowia lipolytica GN=CCT4 PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.213e-17 Identity = 49/143 (34.27%), Postives = 81/143 (56.64%), Query Frame = -3 Query: 206 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDV 634 N ++I+ET+RS+HDALCV R+L R ++V GGGA E+ + + + G F++A+ IP LAEN+GL P+ ++ ++ + + N GI GT+ M E++V + + I LA + K +L+IDD+ Sbjct: 383 NDLVIDETERSLHDALCVLRSLFRVPALVPGGGACEVQVAQVIGKESRAMDGASAICYEEFSNAMLVIPTTLAENAGLNPVNVVTELRVRH-EKGEVNAGISVRR-GTSIMVEEHVIQPALVTTSAITLAAECAKGLLRIDDI 523
BLAST of CN186432 vs. ExPASy Swiss-Prot
Match: THSB_SULAC (Thermosome subunit beta OS=Sulfolobus acidocaldarius GN=thsB PE=3 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 5.502e-17 Identity = 51/146 (34.93%), Postives = 80/146 (54.79%), Query Frame = -3 Query: 200 GNKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 637 G + +++ET+R++ DAL +++R+ + GGGA E + + A + G EQ AI A+A+AL+++ M L EN G PIE L +++ E N GI+ DM V E + K I AT+ +IL+IDD+IS Sbjct: 386 GLERVVDETERALRDALGTVADVVRDGRAIAGGGAVETEIAKRLRKYAPQVGGKEQLAIEAYANALESLVMILIENGGFDPIELLVKLRSAHENETNKWHGINVYTGQIQDMWSLGVIEPAVVKMNAIKAATEASTLILRIDDLIS 531
BLAST of CN186432 vs. ExPASy Swiss-Prot
Match: THSA_AERPE (Thermosome subunit alpha OS=Aeropyrum pernix GN=thsA PE=3 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 5.502e-17 Identity = 53/146 (36.30%), Postives = 87/146 (59.59%), Query Frame = -3 Query: 200 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVG-TNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 634 N M+++E +R+I DAL RN++R IV GGGA E+ ++ + A G +Q AI A+A+AL+ IP LAE++G+ +E L +++ + G++ + DM + NV+E ++ K+Q I A++ ILKIDDVI+ Sbjct: 382 NDMLLDEAERNIKDALHGLRNILREPKIVGGGGAVEVELALKLKEFARTVGGKQQLAIEAYAEALETIPTVLAESAGMDALEALLKLRSLH-SQGYKFAGVNVLEGKIEEDMTKINVYEPVLVKKQVIKSASEAAISILKIDDVIA 526
BLAST of CN186432 vs. ExPASy Swiss-Prot
Match: TCPG_SCHPO (T-complex protein 1 subunit gamma OS=Schizosaccharomyces pombe GN=cct3 PE=1 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.502e-17 Identity = 51/145 (35.17%), Postives = 81/145 (55.86%), Query Frame = -3 Query: 200 NKMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVIS 634 +K +I E +R++ DA+ VARN+ + + GGGA E+A S+ + A GV Q+ RA ADA++ IP L +N G PI+ L+ ++ + E + GID DM E V+E K Q I A + ++L++DD++S Sbjct: 378 SKDIINEVERNLQDAMAVARNVFFHPKLSPGGGATEMAVSVRLAEKARSIEGVAQWPYRAVADAIEIIPRTLVQNCGANPIKALTELRAKH-AEGQHSFGIDGETGRVVDMHEYGVWEPEAVKLQSIKTAIESACLLLRVDDIVS 521
BLAST of CN186432 vs. ExPASy Swiss-Prot
Match: TCPB_RAT (T-complex protein 1 subunit beta OS=Rattus norvegicus GN=Cct2 PE=1 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 5.502e-17 Identity = 45/143 (31.47%), Postives = 81/143 (56.64%), Query Frame = -3 Query: 203 KMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 631 + +++E +RS+HDALCV +++ VYGGG +E+ + AV A R PG E A+ +FA AL +P +A+N+G + ++ ++ E G+D + DM + E+ K+Q +L A + ++IL++D++I Sbjct: 380 QQILDEAERSLHDALCVLAQTVKDPRTVYGGGCSEMLMAHAVTMLASRTPGKEAVAMESFAKALRMLPTIIADNAGYDSADLVAQLRAAH-SEGRITAGLDMKEGSIGDMAVLGITESFQVKRQVLLSAAEAAEVILRVDNII 521
BLAST of CN186432 vs. ExPASy Swiss-Prot
Match: TCPB_MOUSE (T-complex protein 1 subunit beta OS=Mus musculus GN=Cct2 PE=1 SV=4) HSP 1 Score: 88.1965 bits (217), Expect = 5.502e-17 Identity = 45/143 (31.47%), Postives = 83/143 (58.04%), Query Frame = -3 Query: 203 KMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 631 + +++E +RS+HDALCV +++ VYGGG +E+ + AV A+R PG E A+ +FA AL +P +A+N+G + ++ ++ E + G+D + DM + E+ K+Q +L A + ++IL++D++I Sbjct: 380 QQILDEAERSLHDALCVLAQTVKDPRTVYGGGCSEMLMAHAVTQLANRTPGKEAVAMESFAKALRMLPTIIADNAGYDSADLVAQLRAAH-SEGHITAGLDMKEGTIGDMAVLGITESFQVKRQVLLSAAEAAEVILRVDNII 521
BLAST of CN186432 vs. ExPASy Swiss-Prot
Match: TCPB_BOVIN (T-complex protein 1 subunit beta OS=Bos taurus GN=CCT2 PE=2 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 5.502e-17 Identity = 44/143 (30.77%), Postives = 82/143 (57.34%), Query Frame = -3 Query: 203 KMMIEETKRSIHDALCVARNLIRNNSIVYGGGAAEIACSIAVDAAADRYPGVEQYAIRAFADALDAIPMALAENSGLQPIETLSAVKNQQIRENNPNCGIDCNDVGTNDMREQNVFETLIGKQQQILLATQVVKMILKIDDVI 631 + +++E +RS+HDALCV ++++ VYGGG +E+ + AV A R PG E A+ ++A AL +P +A+N+G + ++ ++ E G+D + DM + E+ K+Q +L A + ++IL++D++I Sbjct: 380 QQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAH-SEGKTTAGLDMKEGTIGDMSVLGITESFQVKRQVLLSAAEAAEVILRVDNII 521 The following BLAST results are available for this feature:
BLAST of CN186432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 134
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186432 ID=CN186432; Name=CN186432; organism=Citrus sinensis; type=EST; length=780bpback to top |