CX674992
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX674992 vs. ExPASy Swiss-Prot
Match: LCNCL_LACLA (Lactococcin transport/processing ATP-binding protein lcnC-like OS=Lactococcus lactis subsp. lactis GN=lcnC PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.832e-12 Identity = 64/233 (27.47%), Postives = 107/233 (45.92%), Query Frame = 3 Query: 84 LVRDLSLVINEKEHLLVMGPSGSGKTSLLRAMAGLWSDGRGKITFYVKDREETDAHTSDVDSLEVNSQNMNGELTRSMNRNSRGVFFLPQRPYMVLGSLRQQLIYPTWTEEVKLASDAAKSAGLVPFLTSAQKLENVGRKSSKPSTDDLIKA-LEDVKLGYILPRLNSLDTTYEWSSVLSLGEQQRLAFARLLLSKPQIVLLDESTSALDEANEAHLYEQIEAAGITYISVGH 779 ++ ++ L I E E L ++G SGSGK++L++ + + G IT D ++ D H +L R +N +LPQ+PY+ GS+ L+ AS+A ++ + A+ I+A +E ++LGY + +S LS G++QR+A AR LLS +I++LDE+TS LD E + + + A T I + H Sbjct: 497 VLSEIKLSIKENEKLTIVGISGSGKSTLVKLLVNFFQPTSGTITLGGIDLQQFDKH----------------QLRRLIN-------YLPQQPYIFTGSIMDNLLLG--------ASEATSQEEIIRAVELAE-----------------IRADIEQMQLGYQTELSSD-------ASSLSGGQKQRIALARALLSPAKILILDEATSNLDMITEKKILKNLLALDKTIIFIAH 674
BLAST of CX674992 vs. ExPASy Swiss-Prot
Match: POTA_MYCH2 (Spermidine/putrescine import ATP-binding protein potA OS=Mycoplasma hyopneumoniae (strain 232) GN=potA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.696e-11 Identity = 75/294 (25.51%), Postives = 127/294 (43.20%), Query Frame = 3 Query: 18 EKSQKLLDIEDLTLKTPTSKATLVRDLSLVINEKEHLLVMGPSGSGKTSLLRAMAGLWSDGRGKITFYVKDREETDAHTSDVDSLEVN-------SQNMNGELTRSMNRNSRGVFFLPQRPYMVLGSLRQQLIYPTWTEEVKLASDAAK--SAGLVPFLTSAQKLENVGRKSSKPSTDD-----------LIKALEDVKLGYILPRLNSLDTTYEWSSVLSL----------------GEQQRLAFARLLLSKPQIVLLDESTSALD----EANEAHLYEQIEAAGITYISVGH 779 EKS+ ++ + D+ + K ++ ++L I + + ++GPSGSGKT++LR + G RG+I F D ++ AH D ++ + S N E + R + +P + L+++ W ++ K K A L L + Q L+ RK + DD L E K Y+ R+ + E + ++ L G +QR+A AR L+ +P+IVLLDE SALD + + L + + G+T+I V H Sbjct: 5 EKSEIIISLVDVDKEFGDKK--VLDQINLDIKRGDFVTLLGPSGSGKTTILRLIGGFEWTTRGEIKFNGIDIKDVPAHKRDTATIFQDYALFPHLSVRGNIEFGLKLKRIKKKAEEIPDVVWKKFEHLKKK-----WQDKQKRKIKELKILQAHLEKLLENPQ-LDIKKRKKLQDKLDDSDFRYSNWENYLTSKSESFKKKYLTRRITKQEINKEITDIIDLVGLTGNENRAISELSGGMKQRVALARSLVIEPEIVLLDEPLSALDTKIRQKMQVFLKKIQQKLGLTFIFVTH 290 The following BLAST results are available for this feature:
BLAST of CX674992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX674992 ID=CX674992; Name=CX674992; organism=Citrus sinensis; type=EST; length=780bpback to top |