CN186422
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186422 vs. ExPASy Swiss-Prot
Match: DID4_YEAST (DOA4-independent degradation protein 4 OS=Saccharomyces cerevisiae GN=DID4 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.285e-14 Identity = 51/122 (41.80%), Postives = 72/122 (59.02%), Query Frame = -3 Query: 155 TKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMGDAIDDALHGD--DXXXXXXELVNQVLDEIGIDINQELVNAPSSTVA-APAVKGKVAQAEATGNDD---GGIDSDLQARLDNLRR 502 T + MNR MNLP LQ+I EFE+Q++ M E M +AID+ + GD D E+VN+VLDEIG+D+N +L + P + V+ AP + + E G G D DLQARL+ L++ Sbjct: 110 TGLLAGMNRTMNLPQLQRISMEFEKQSDLMGQRQEFMDEAIDNVM-GDEVDEDEEADEIVNKVLDEIGVDLNSQLQSTPQNLVSNAPIAETAMGIPEPIGAGSEFHGNPDDDLQARLNTLKK 230
BLAST of CN186422 vs. ExPASy Swiss-Prot
Match: YDS1_SCHPO (Uncharacterized protein C4F8.01 OS=Schizosaccharomyces pombe GN=SPAC4F8.01 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.192e-14 Identity = 46/120 (38.33%), Postives = 71/120 (59.17%), Query Frame = -3 Query: 155 VKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMGDAIDDALHGDDXXXXXXELVNQVLDEIGIDINQELVNAPSSTVAAPAVKGKVAQAEATGNDDGGIDSDLQARLDNLRR 514 ++G T+ + MN+ MN+P++ +I Q+FER+NE ME E++ + +DDAL DD ELVN+VLDEIG+D++Q L +A + P +K + +LQARLD L + Sbjct: 106 MRGATRLLTGMNKSMNIPAMARITQQFERENEIMEQRQEMIDENMDDALEEDD-EEEADELVNKVLDEIGVDLSQGLPDAATQIGTVPELK---------------TEDNLQARLDELAK 209
BLAST of CN186422 vs. ExPASy Swiss-Prot
Match: CHM2B_XENTR (Charged multivesicular body protein 2b OS=Xenopus tropicalis GN=chmp2b PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.798e-12 Identity = 37/108 (34.26%), Postives = 63/108 (58.33%), Query Frame = -3 Query: 176 KAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMGDAIDDALHGDDXXXXXXELVNQVLDEIGIDINQELVNAPSSTVAAPAVKGKVAQAEATGNDDGGIDSDLQA 499 K M +N++M+ + MQ F+++N KMEM E++ D +DD D ++VNQVLDEIGI+I+ ++ APS+ P+ + ++++G D I+ L+A Sbjct: 107 KTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDASDDEEESQDIVNQVLDEIGIEISGKMAKAPSAAKGLPS----TSASKSSGISDEEIERQLKA 210
BLAST of CN186422 vs. ExPASy Swiss-Prot
Match: CH2BA_XENLA (Charged multivesicular body protein 2b-A OS=Xenopus laevis GN=chmp2b-A PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.798e-12 Identity = 37/108 (34.26%), Postives = 63/108 (58.33%), Query Frame = -3 Query: 176 KAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMGDAIDDALHGDDXXXXXXELVNQVLDEIGIDINQELVNAPSSTVAAPAVKGKVAQAEATGNDDGGIDSDLQA 499 K M +N++M+ + MQ F+++N KMEM E++ D +DD + ++VNQVLDEIGI+I+ ++ APS+ P+ + +++TG D I+ L+A Sbjct: 107 KTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDASEDEEESQDIVNQVLDEIGIEISGKMAKAPSAAKGLPS----ASASKSTGISDEEIERQLKA 210
BLAST of CN186422 vs. ExPASy Swiss-Prot
Match: TRXH_RICCO (Thioredoxin H-type OS=Ricinus communis PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.018e-11 Identity = 32/36 (88.89%), Postives = 34/36 (94.44%), Query Frame = 2 Query: 605 AAEEGQVIGCHTVEAWNEQLQKSNETKQLVVVDFTA 712 AAEEGQVIGCHTVEAWNEQLQK N+TK L+VVDFTA Sbjct: 2 AAEEGQVIGCHTVEAWNEQLQKGNDTKGLIVVDFTA 37
BLAST of CN186422 vs. ExPASy Swiss-Prot
Match: CHM2B_PONAB (Charged multivesicular body protein 2b OS=Pongo abelii GN=CHMP2B PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.018e-11 Identity = 36/99 (36.36%), Postives = 61/99 (61.62%), Query Frame = -3 Query: 203 KAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMGDAIDDALHGDDXXXXXXELVNQVLDEIGIDINQELVNAPSSTVAAPAVKGKVAQAEATGNDD 499 K M +N++M+ + MQ F+++N KMEM E++ D +DD G D ++VNQVLDEIGI+I+ ++ APS+ + P+ + ++AT +D+ Sbjct: 107 KTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLPS----ASTSKATISDE 201
BLAST of CN186422 vs. ExPASy Swiss-Prot
Match: CHM2B_MOUSE (Charged multivesicular body protein 2b OS=Mus musculus GN=Chmp2b PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.018e-11 Identity = 36/99 (36.36%), Postives = 61/99 (61.62%), Query Frame = -3 Query: 203 KAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMGDAIDDALHGDDXXXXXXELVNQVLDEIGIDINQELVNAPSSTVAAPAVKGKVAQAEATGNDD 499 K M +N++M+ + MQ F+++N KMEM E++ D +DD G D ++VNQVLDEIGI+I+ ++ APS+ + P+ + ++AT +D+ Sbjct: 107 KTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLPS----ASTSKATISDE 201
BLAST of CN186422 vs. ExPASy Swiss-Prot
Match: CHM2B_HUMAN (Charged multivesicular body protein 2b OS=Homo sapiens GN=CHMP2B PE=1 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.018e-11 Identity = 36/99 (36.36%), Postives = 61/99 (61.62%), Query Frame = -3 Query: 203 KAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMGDAIDDALHGDDXXXXXXELVNQVLDEIGIDINQELVNAPSSTVAAPAVKGKVAQAEATGNDD 499 K M +N++M+ + MQ F+++N KMEM E++ D +DD G D ++VNQVLDEIGI+I+ ++ APS+ + P+ + ++AT +D+ Sbjct: 107 KTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLPS----ASTSKATISDE 201
BLAST of CN186422 vs. ExPASy Swiss-Prot
Match: CHM2B_BOVIN (Charged multivesicular body protein 2b OS=Bos taurus GN=CHMP2B PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.330e-11 Identity = 33/84 (39.29%), Postives = 53/84 (63.10%), Query Frame = -3 Query: 248 KAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMGDAIDDALHGDDXXXXXXELVNQVLDEIGIDINQELVNAPSSTVAAPA 499 K M +N++M+ + MQ F+++N KMEM E++ D +DD G D ++VNQVLDEIGI+I+ ++ APS+ + P+ Sbjct: 107 KTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEEESQDIVNQVLDEIGIEISGKMAKAPSAARSLPS 190
BLAST of CN186422 vs. ExPASy Swiss-Prot
Match: CHM2B_DANRE (Charged multivesicular body protein 2b OS=Danio rerio GN=chmp2b PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.737e-11 Identity = 37/109 (33.94%), Postives = 62/109 (56.88%), Query Frame = -3 Query: 176 TKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVTEVMGDAIDDALHGDDXXXXXXELVNQVLDEIGIDINQELVNAPSSTVAAPAVKGKVAQAEATGNDDGGIDSDLQA 502 TK M +N++M+ + +Q F+++ KM+M E+M D +D+ ++VNQVLDEIGI+I+ ++ +APS+ P+ A A+A G D I+ L+A Sbjct: 106 TKTMQAVNKKMDPKKTMQTLQNFQKETAKMDMTEEMMNDTLDEIFEDSGDEEESQDIVNQVLDEIGIEISGKMAHAPSAARKTPS----AATAKADGISDEDIERQLKA 210 The following BLAST results are available for this feature:
BLAST of CN186422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186422 ID=CN186422; Name=CN186422; organism=Citrus sinensis; type=EST; length=714bpback to top |