CN186415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186415 vs. ExPASy Swiss-Prot
Match: RS9B_SCHPO (40S ribosomal protein S9-B OS=Schizosaccharomyces pombe GN=rps9b PE=1 SV=3) HSP 1 Score: 241.891 bits (616), Expect = 2.460e-63 Identity = 116/172 (67.44%), Postives = 145/172 (84.30%), Query Frame = 1 Query: 115 RNYGKTFKKPRRGYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFVEERQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPF*GGRPGRVKRRNI 630 R KT+K PRR +E RLDAEL+L GEYGLR K E+WRV LS+IR AAR+LLTLDEK+P+R+FEG A++RR+ R G ++E + KLDYVLAL +E+FLERRLQT VFK G+AKSIHHARVLI QRHIRVG+Q+VN+PSFVVR+D+QKHI+F+L+SP+ GGRPGR KR+ + Sbjct: 6 RKQSKTYKVPRRPFESARLDAELKLAGEYGLRNKHEIWRVALTLSKIRRAARELLTLDEKDPKRLFEGNAIIRRLVRLGILDESRMKLDYVLALRIEDFLERRLQTQVFKLGLAKSIHHARVLIFQRHIRVGKQIVNVPSFVVRLDAQKHIDFALSSPYGGGRPGRCKRKRL 177
BLAST of CN186415 vs. ExPASy Swiss-Prot
Match: RS9A_SCHPO (40S ribosomal protein S9-A OS=Schizosaccharomyces pombe GN=rps9a PE=1 SV=2) HSP 1 Score: 241.891 bits (616), Expect = 2.460e-63 Identity = 116/172 (67.44%), Postives = 145/172 (84.30%), Query Frame = 1 Query: 115 RNYGKTFKKPRRGYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFVEERQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPF*GGRPGRVKRRNI 630 R KT+K PRR +E RLDAEL+L GEYGLR K E+WRV LS+IR AAR+LLTLDEK+P+R+FEG A++RR+ R G ++E + KLDYVLAL +E+FLERRLQT VFK G+AKSIHHARVLI QRHIRVG+Q+VN+PSFVVR+D+QKHI+F+L+SP+ GGRPGR KR+ + Sbjct: 6 RKQSKTYKVPRRPFESARLDAELKLAGEYGLRNKHEIWRVALTLSKIRRAARELLTLDEKDPKRLFEGNAIIRRLVRLGILDETRMKLDYVLALRIEDFLERRLQTQVFKLGLAKSIHHARVLIFQRHIRVGKQIVNVPSFVVRLDTQKHIDFALSSPYGGGRPGRCKRKRL 177
BLAST of CN186415 vs. ExPASy Swiss-Prot
Match: RS9B_YEAST (40S ribosomal protein S9-B OS=Saccharomyces cerevisiae GN=RPS9B PE=1 SV=4) HSP 1 Score: 236.884 bits (603), Expect = 7.915e-62 Identity = 114/171 (66.67%), Postives = 142/171 (83.04%), Query Frame = 1 Query: 115 RNYGKTFKKPRRGYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFVEERQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPF*GGRPGRVKRRN 627 R Y KT+ P+R YE RLDAEL+L GE+GL+ KRE++R+ + LS+IR AARDLLT DEK+P+R+FEG AL+RR+ R G + E + KLDYVLAL VE+FLERRLQT V+K G+AKS+HHARVLI QRHI VG+Q+VNIPSF+VR+DS+KHI+F+ TSPF G RPGRV RRN Sbjct: 6 RTYSKTYSTPKRPYESSRLDAELKLAGEFGLKNKREIYRISFQLSKIRRAARDLLTRDEKDPKRLFEGNALIRRLVRVGVLSEDKKKLDYVLALKVEDFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVRLDSEKHIDFAPTSPFGGARPGRVARRN 176
BLAST of CN186415 vs. ExPASy Swiss-Prot
Match: RS9A_YEAST (40S ribosomal protein S9-A OS=Saccharomyces cerevisiae GN=RPS9A PE=1 SV=3) HSP 1 Score: 235.728 bits (600), Expect = 1.763e-61 Identity = 113/171 (66.08%), Postives = 142/171 (83.04%), Query Frame = 1 Query: 115 RNYGKTFKKPRRGYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFVEERQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPF*GGRPGRVKRRN 627 R Y KT+ P+R YE RLDAEL+L GE+GL+ K+E++R+ + LS+IR AARDLLT DEK+P+R+FEG AL+RR+ R G + E + KLDYVLAL VE+FLERRLQT V+K G+AKS+HHARVLI QRHI VG+Q+VNIPSF+VR+DS+KHI+F+ TSPF G RPGRV RRN Sbjct: 6 RTYSKTYSTPKRPYESSRLDAELKLAGEFGLKNKKEIYRISFQLSKIRRAARDLLTRDEKDPKRLFEGNALIRRLVRVGVLSEDKKKLDYVLALKVEDFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVRLDSEKHIDFAPTSPFGGARPGRVARRN 176
BLAST of CN186415 vs. ExPASy Swiss-Prot
Match: RS9_CAEEL (40S ribosomal protein S9 OS=Caenorhabditis elegans GN=rps-9 PE=2 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.303e-61 Identity = 111/168 (66.07%), Postives = 144/168 (85.71%), Query Frame = 1 Query: 127 KTFKKPRRGYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFVEERQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPF*GGRPGRVKRRNI 630 K K PRR +EKERLD EL+L+G +GL+ KRE+WRV+Y L+++R AAR+LLTL++K+P+R+FEG ALLRR+ + G ++E + KLDYVL L VE+FLERRLQT VFK G+AKSIHHAR+LI+Q HIRV RQ+V++PSF+VR+DSQKHI+FSL SP+ GGRPGRVKRR + Sbjct: 10 KVTKSPRRPFEKERLDQELKLIGTFGLKNKREVWRVKYTLAKVRKAARELLTLEDKDPKRLFEGNALLRRLVKIGVLDETKMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARILIKQHHIRVRRQVVDVPSFIVRLDSQKHIDFSLQSPYGGGRPGRVKRRTL 177
BLAST of CN186415 vs. ExPASy Swiss-Prot
Match: RS9_TRYBB (Probable 40S ribosomal protein S9 OS=Trypanosoma brucei brucei PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 2.815e-59 Identity = 107/170 (62.94%), Postives = 137/170 (80.59%), Query Frame = 1 Query: 112 YRNYGKTFKKPRRGYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFVEERQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPF*GGRPGRVKR 621 Y N+ + +K PRR +EKERLD E++L G+YGLRCKRE+WRV LS++R AR LLTL E +PRR+ EG A++RR H YGF++E ++KLDYVL+LTV + LERRLQT+VFK G+AKS+HH+RVLI+QRHI V +Q+V IPSF+VRV S+ HI F+ SPF GRPGRVKR Sbjct: 4 YNNFNRVWKAPRRPFEKERLDREMKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPENHPRRLLEGSAIMRRCHGYGFLDEDKDKLDYVLSLTVPDILERRLQTVVFKHGLAKSVHHSRVLIQQRHIAVAKQIVTIPSFIVRVSSEHHIAFADASPFGNGRPGRVKR 173
BLAST of CN186415 vs. ExPASy Swiss-Prot
Match: RS9_NAEFO (40S ribosomal protein S9 OS=Naegleria fowleri GN=RPS9 PE=2 SV=1) HSP 1 Score: 199.519 bits (506), Expect = 1.400e-50 Identity = 101/180 (56.11%), Postives = 134/180 (74.44%), Query Frame = 1 Query: 94 MVHVSFYRNYGKTFKKPRRGYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFVEERQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFS-LTSPF*GGRPGRVKRRNI 630 MV YR + K PRR +EKER+D EL++ G+YGL+ K+E+WR+QY L+R R AR LLTL E + +R FEG ALLRRM R G ++E + +LDY+L+L E+ LERRLQT+V K G++KSIHHAR LI QRHIRVG+Q VN+PSF+VRVDS+KHI S ++ GG+PGR+ R+ + Sbjct: 1 MVQNRCYRVHSKVSLPPRRPFEKERMDRELKMCGKYGLKNKQEIWRLQYYLARARKTARHLLTLPEDDMKRQFEGAALLRRMTRLGLLDESKQQLDYILSLKTEDLLERRLQTVVQKLGLSKSIHHARQLIFQRHIRVGKQTVNVPSFIVRVDSEKHINMSPFSALVQGGKPGRMTRKKL 180
BLAST of CN186415 vs. ExPASy Swiss-Prot
Match: RS9_ENTHI (40S ribosomal protein S9 OS=Entamoeba histolytica GN=2.t00127 PE=2 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 1.148e-44 Identity = 91/172 (52.91%), Postives = 126/172 (73.26%), Query Frame = 1 Query: 115 RNYGKTFKKPRRGYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFVEERQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPF*GGR-PGRVKRRN 627 RN+ T+K P+ YE+ER DAEL+LVG++GL+ K+E+ RV Y L +R A+ +L D K+P+R+ EG ALLRR+H G + QNKL++VLAL EN LERRLQTLV++ G AKSIHHARVLIR + I+VG+Q+V++PSF+VRV+S+ I+ + +P GR KR+N Sbjct: 6 RNHSITYKTPKVPYERERFDAELKLVGQFGLKNKKEIQRVHYMLGHMRTIAKVMLMKDAKDPKRLLEGAALLRRLHNLGILPRDQNKLEFVLALKEENLLERRLQTLVYRKGFAKSIHHARVLIRGKMIKVGKQVVDVPSFLVRVESEPLIQLADNTPLTNPEINGRRKRKN 177
BLAST of CN186415 vs. ExPASy Swiss-Prot
Match: RS9_PIG (40S ribosomal protein S9 (Fragment) OS=Sus scrofa GN=RPS9 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.552e-41 Identity = 82/122 (67.21%), Postives = 102/122 (83.61%), Query Frame = 1 Query: 127 KTFKKPRRGYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFVEERQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQ 492 KT+ PRR +EK RLD EL+L+GEYGLR KRE+WRV++ L++IR AAR+LLTLDEK+PRR+FEG ALLRR+ R G ++E + KLDY+L L +E+FLERRLQT VFK G+A SIHH RVLIRQ Sbjct: 9 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAXSIHHXRVLIRQ 130
BLAST of CN186415 vs. ExPASy Swiss-Prot
Match: RS4_IGNH4 (30S ribosomal protein S4P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps4p PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 1.968e-28 Identity = 70/155 (45.16%), Postives = 101/155 (65.16%), Query Frame = 1 Query: 127 KTFKKPRRGYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFVEERQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPF 591 K + P + KERL E++L+GEYGLR KRE+W L R R+ AR+LL L + + E +ALL+R++ G V+E LD VL+LTV + LERRLQT+V+K G+AKSI+HAR L+ HI + + V P ++VR D ++ I ++ TSP+ Sbjct: 9 KKWSPPGHPWVKERLIEEMKLMGEYGLRNKREIWIAAAMLRRYRHRARELLALPAEVREK--EEKALLKRLYDLGLVDENAT-LDDVLSLTVRDLLERRLQTVVYKKGLAKSIYHARQLVTHGHIAINGRRVTSPGYIVRRDEEELIGYAPTSPY 160 The following BLAST results are available for this feature:
BLAST of CN186415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186415 ID=CN186415; Name=CN186415; organism=Citrus sinensis; type=EST; length=695bpback to top |