CN186413

Overview
NameCN186413
Unique NameCN186413
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length803
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CN186413_ssr792 microsatellite CN186413_ssr792:792..803. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig2537 contig Csv1_Contig2537:1..803. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CN186413 vs. ExPASy Swiss-Prot
Match: CALM_TETPY (Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4)

HSP 1 Score: 268.47 bits (685), Expect = 3.136e-71
Identity = 132/147 (89.80%), Postives = 142/147 (96.60%), Query Frame = -2 
Query:  209 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 649
            DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NG ISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDG INYEEFV++MMAK
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGHINYEEFVRMMMAK 149
[Close]
BLAST of CN186413 vs. ExPASy Swiss-Prot
Match: CALM_PAXIN (Calmodulin OS=Paxillus involutus GN=calA PE=2 SV=3)

HSP 1 Score: 267.7 bits (683), Expect = 5.349e-71
Identity = 130/147 (88.44%), Postives = 142/147 (96.60%), Query Frame = -2 
Query:  209 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 649
            DQL+++QISEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTE ELQDMINEVDADGNGTIDFPEFL +MARKM+DTDSEEE+KEAF+VFDKD NG+ISAAELRHVMTNLGEKLTD EVDEMIREADVDGDGQINY+EFVK+M++K
Sbjct:    3 DQLSEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEGELQDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDTEVDEMIREADVDGDGQINYDEFVKMMLSK 149
[Close]
BLAST of CN186413 vs. ExPASy Swiss-Prot
Match: CALM_STYLE (Calmodulin OS=Stylonychia lemnae PE=3 SV=2)

HSP 1 Score: 267.314 bits (682), Expect = 6.985e-71
Identity = 132/147 (89.80%), Postives = 141/147 (95.92%), Query Frame = -2 
Query:  209 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 649
            D LT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL+LMARKMKDTD+EEEL EAF+VFD+D NG ISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG INYEEFV++MMAK
Sbjct:    3 DNLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELVEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGHINYEEFVRMMMAK 149
[Close]
BLAST of CN186413 vs. ExPASy Swiss-Prot
Match: CALM_PATSP (Calmodulin OS=Patinopecten sp. PE=1 SV=2)

HSP 1 Score: 267.314 bits (682), Expect = 6.985e-71
Identity = 130/147 (88.44%), Postives = 142/147 (96.60%), Query Frame = -2 
Query:  209 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 649
            DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADG+GTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD +GFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGDGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTSK 149
[Close]
BLAST of CN186413 vs. ExPASy Swiss-Prot
Match: CALM_OREMO (Calmodulin OS=Oreochromis mossambicus GN=calm PE=2 SV=3)

HSP 1 Score: 267.314 bits (682), Expect = 6.985e-71
Identity = 130/147 (88.44%), Postives = 142/147 (96.60%), Query Frame = -2 
Query:  209 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 649
            DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAFRVFDKD NG+ISAAELR+VMTNLGEKLTDE VDEMIREAD+DGDGQ+NYEEFV++M AK
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRYVMTNLGEKLTDEXVDEMIREADIDGDGQVNYEEFVQMMTAK 149
[Close]
BLAST of CN186413 vs. ExPASy Swiss-Prot
Match: CALM_AGABI (Calmodulin OS=Agaricus bisporus PE=1 SV=2)

HSP 1 Score: 266.929 bits (681), Expect = 9.123e-71
Identity = 129/147 (87.76%), Postives = 143/147 (97.28%), Query Frame = -2 
Query:  209 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 649
            DQL+++QISEFKEAFSLFDKDGDG ITTKELGTVMRSLGQNP++AEL+DMINEVDADGNGTIDFPEFL +MARKM+DTDSEEE+KEAF+VFDKD NG+ISAAELRHVMTNLGEKLTD EVDEMIREADVDGDGQINYEEFVK+M++K
Sbjct:    3 DQLSEEQISEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPSQAELEDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDSEVDEMIREADVDGDGQINYEEFVKMMLSK 149
[Close]
BLAST of CN186413 vs. ExPASy Swiss-Prot
Match: CALM_SUBDO (Calmodulin OS=Suberites domuncula PE=2 SV=3)

HSP 1 Score: 266.544 bits (680), Expect = 1.192e-70
Identity = 130/147 (88.44%), Postives = 140/147 (95.24%), Query Frame = -2 
Query:  209 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 649
            DQLT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVD DGNGTIDFPEFL +MARKMK+TDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD DGDGQ+NYEEFV +M +K
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDTDGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADTDGDGQVNYEEFVGMMTSK 149
[Close]
BLAST of CN186413 vs. ExPASy Swiss-Prot
Match: CALM_HALOK (Calmodulin OS=Halichondria okadai PE=2 SV=3)

HSP 1 Score: 265.774 bits (678), Expect = 2.032e-70
Identity = 129/147 (87.76%), Postives = 141/147 (95.92%), Query Frame = -2 
Query:  209 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 649
            D L+++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKMK+TDSEEE++EAFRVFDKD NGFISAAELRHVMTNLGEKLTDEEVDEMIREAD+DGDGQ+NYEEFV +M +K
Sbjct:    3 DALSEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKETDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVAMMTSK 149
[Close]
BLAST of CN186413 vs. ExPASy Swiss-Prot
Match: CALM2_BRAFL (Calmodulin-2 OS=Branchiostoma floridae GN=CAM2 PE=2 SV=4)

HSP 1 Score: 265.388 bits (677), Expect = 2.654e-70
Identity = 129/147 (87.76%), Postives = 141/147 (95.92%), Query Frame = -2 
Query:  209 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 649
            DQLT++QI+EFKEAFSLFDKDG+G ITTKELGTVMRSLGQNPTE ELQDMINEVDADGNGTIDFPEFL +MARKMKDTDSEEE++EAF+VFDKD NGFISAAELRHVMTN GEKLTDEEVDEMIREAD+DGDGQ+NYEEFVK+M +K
Sbjct:    3 DQLTEEQIAEFKEAFSLFDKDGNGNITTKELGTVMRSLGQNPTEGELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDKDGNGFISAAELRHVMTNPGEKLTDEEVDEMIREADIDGDGQVNYEEFVKMMTSK 149
[Close]
BLAST of CN186413 vs. ExPASy Swiss-Prot
Match: CALM_PHYPO (Calmodulin OS=Physarum polycephalum PE=2 SV=3)

HSP 1 Score: 265.003 bits (676), Expect = 3.467e-70
Identity = 128/147 (87.07%), Postives = 142/147 (96.60%), Query Frame = -2 
Query:  209 DQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 649
            D LT++QI+EFKEAFSLFDKDGDG ITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFL +MARKM DTD+EEE++EAF+VFDKD NGFISAAELRHVMTNLGEKL+DEEVDEMIREADVDGDGQ+NY+EFVK+M++K
Sbjct:    3 DSLTEEQIAEFKEAFSLFDKDGDGNITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMADTDTEEEIREAFKVFDKDGNGFISAAELRHVMTNLGEKLSDEEVDEMIREADVDGDGQVNYDEFVKMMLSK 149
The following BLAST results are available for this feature:
BLAST of CN186413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 477
Match NameE-valueIdentityDescription
CALM_TETPY3.136e-7189.80Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4[more]
CALM_PAXIN5.349e-7188.44Calmodulin OS=Paxillus involutus GN=calA PE=2 SV=3[more]
CALM_STYLE6.985e-7189.80Calmodulin OS=Stylonychia lemnae PE=3 SV=2[more]
CALM_PATSP6.985e-7188.44Calmodulin OS=Patinopecten sp. PE=1 SV=2[more]
CALM_OREMO6.985e-7188.44Calmodulin OS=Oreochromis mossambicus GN=calm PE=2... [more]
CALM_AGABI9.123e-7187.76Calmodulin OS=Agaricus bisporus PE=1 SV=2[more]
CALM_SUBDO1.192e-7088.44Calmodulin OS=Suberites domuncula PE=2 SV=3[more]
CALM_HALOK2.032e-7087.76Calmodulin OS=Halichondria okadai PE=2 SV=3[more]
CALM2_BRAFL2.654e-7087.76Calmodulin-2 OS=Branchiostoma floridae GN=CAM2 PE=... [more]
CALM_PHYPO3.467e-7087.07Calmodulin OS=Physarum polycephalum PE=2 SV=3[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002N18_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002N18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186413 ID=CN186413; Name=CN186413; organism=Citrus sinensis; type=EST; length=803bp
AACCGAAAAGTTTTGCGAGTCACAAGACATATTGACCAGTGAGACAACAT
TCTTCCTACACCATCAGGCCCATCACCATTAAAAGACCATTGCTTCCTTT
AGCCTGACCCTCATGACTATCAAATTAAAAATTGTAAAAGAGAAAACTAG
GAATCCCTTTATAATTTAGTCAACCCATTTTATAAGTATTGGTGGGTTGG
GGTCATTACTTGGCCATCATAACCTTGACAAATTCCTCATAATTTATCTG
GCCATCACCATCAACATCAGCTTCCCTTATCATCTCATCAACTTCTTCAT
CAGTAAGTTTCTCTCCTAGGTTTGTCATCACATGGCGCAGCTCAGCAGCT
GAGATGAAACCATTCTGATCCTTGTCGAAAACCCGGAAGGCCTCTTTCAG
CTCCTCCTCAGAGTCGGTATCCTTCATCTTCCTGGCCATGAGGTTTAGGA
ATTCAGGAAAATCAATAGTTCCATTACCATCAGCATCCACTTCATTGATC
ATGTCCTGGAGCTCAGCCTCAGTGGGGTTCTGACCCAGTGACCTCATAAC
AGTGCCAAGCTCCTTGGTGGTAATGCAACCGTCGCCATCCTTGTCAAACA
AGCTGAAGGCCTCTTTGAACTCAGAGATCTGATCGTCCGTGAGCTGATCC
CTCTTCTCTGTTTCCATGAAAATTTAAAACTCCAAAAAAAGAAGAAATAA
AAAGAAAAAGAAAATTAGAAGCTCACAGAACAACGAAGTCTCACTTACCT
TCAGAGAATTCAGATCTAAAAGTTTTGTTCACGTAGACCTTCACCACCAC
CAC
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