CN186411

Overview
NameCN186411
Unique NameCN186411
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length719
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186411 vs. ExPASy Swiss-Prot
Match: PDC2_PEA (Pyruvate decarboxylase isozyme 2 (Fragment) OS=Pisum sativum GN=PDC2 PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.429e-61
Identity = 112/133 (84.21%), Postives = 120/133 (90.23%), Query Frame = 3
Query:  321 PVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLXXXXXXXXXFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS 719
            PVYIS+ CNLPAIPHPTFSR+PVPFSL+PKLSN+MGL         FLNKAVKPVLV GPK+RVAKA +AFVELADA GYA+AVMPSAKG+VPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS
Sbjct:    1 PVYISIGCNLPAIPHPTFSRDPVPFSLAPKLSNQMGLEAAVEAAAEFLNKAVKPVLVGGPKLRVAKASDAFVELADASGYALAVMPSAKGMVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS 133          
BLAST of CN186411 vs. ExPASy Swiss-Prot
Match: PDC3_SCHPO (Probable pyruvate decarboxylase C186.09 OS=Schizosaccharomyces pombe GN=SPAC186.09 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.298e-50
Identity = 101/238 (42.44%), Postives = 142/238 (59.66%), Query Frame = 3
Query:    6 AADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLXXXXXXXXXFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS 719
            AA+GYAR+ G+ ACVVT++VG  +  + I GAY+E+LP+I I G PN+ND G++ +LHHT+G  DFS +    + +TC    +    +A  LID A+  AL + KPVYI V  N+ +   P  +  P      P+ SN+  L          +N   KPVL+AGPK+R  KA +AF+ELA++   +VAVMP+AK   PE HP++ G YWG  ST     I+  +D  + AG  F DYS
Sbjct:   67 AAEGYARANGIAACVVTYSVGAFTAFDGIGGAYAEDLPVILISGSPNTNDIGSSHLLHHTLGTHDFSYQYEMAKKITCAAVSIQRPTEAPRLIDYAIKMALLKKKPVYIEVPTNVAS--QPCAAPGPASLITEPETSNQEYLQMAVDISAKIVNGKQKPVLLAGPKLRSFKAESAFLELANSLNCSVAVMPNAKSFFPESHPNYAGIYWGQASTLGAESIINWSDCIICAGTTFTDYS 302          
BLAST of CN186411 vs. ExPASy Swiss-Prot
Match: PDC2_SCHPO (Probable pyruvate decarboxylase C1F8.07c OS=Schizosaccharomyces pombe GN=SPAC1F8.07c PE=1 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 7.332e-50
Identity = 99/239 (41.42%), Postives = 147/239 (61.51%), Query Frame = 3
Query:    6 AADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLXXXXXXXXXFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIV-ESADAYLFAGPIFNDYS 719
            AA+GYARS G+   VVT++VG L+  + I GAY+ENLP+I + G PN+ND  +  +LHHT+G  DF  ++   + +TC    +   EDA  +ID A+  A+ + KPVYI +  N+   P P     P+   +SP++S++  L          ++K  KP+L+AGPK+R A A +AFV+LA+A   A  +MP+AKG   E H ++ G YWG VS++   + V ES+D  + AG +FNDYS
Sbjct:   62 AAEGYARSNGIACAVVTYSVGALTAFDGIGGAYAENLPVILVSGSPNTNDLSSGHLLHHTLGTHDFEYQMEIAKKLTCAAVAIKRAEDAPVMIDHAIRQAILQHKPVYIEIPTNMANQPCPV--PGPISAVISPEISDKESLEKATDIAAELISKKEKPILLAGPKLRAAGAESAFVKLAEALNCAAFIMPAAKGFYSEEHKNYAGVYWGEVSSSETTKAVYESSDLVIGAGVLFNDYS 298          
BLAST of CN186411 vs. ExPASy Swiss-Prot
Match: PDC_ZYMMO (Pyruvate decarboxylase OS=Zymomonas mobilis GN=pdc PE=1 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.809e-47
Identity = 96/238 (40.34%), Postives = 139/238 (58.40%), Query Frame = 3
Query:    6 AADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLXXXXXXXXXFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS 719
            +A+GYAR++G  A VVT++VG LS  +AI GAY+ENLP+I I G PN+ND+    +LHH +G  D+  +L   + +T     +   E+A   ID  + TAL+E KPVY+ +ACN+ ++  P  +  P     + + S+E  L         F+    K  ++ G K+R A A  A V+ ADA G AVA M +AK   PE +PH+IGT WG VS     + ++ ADA +   P+FNDYS
Sbjct:   56 SAEGYARAKGAAAAVVTYSVGALSAFDAIGGAYAENLPVILISGAPNNNDHAAGHVLHHALGKTDYHYQLEMAKNITAAAEAIYTPEEAPAKIDHVIKTALREKKPVYLEIACNIASM--PCAAPGPASALFNDEASDEASLNAAVEETLKFIANRDKVAVLVGSKLRAAGAEEAAVKFADALGGAVATMAAAKSFFPEENPHYIGTSWGEVSYPGVEKTMKEADAVIALAPVFNDYS 291          
BLAST of CN186411 vs. ExPASy Swiss-Prot
Match: PDC_NEUCR (Pyruvate decarboxylase OS=Neurospora crassa GN=cfp PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.423e-46
Identity = 95/239 (39.75%), Postives = 134/239 (56.07%), Query Frame = 3
Query:    3 IAADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLXXXXXXXXXFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS 719
            +AA+GYAR+ G+ ACVVT++VG LS  N    AY+ENLPL+ I G PN+ND     ILHHT+G PD++ +    + +TC    +    DA  LID A+  A+   KP YI +  NL           P+     P  S++  L         +L+  +KPV++ GPK   A +    +E A+A G AVA+ P+AKG+ PE H  F+G +WG VS+     +V  ADA +  G +FNDYS
Sbjct:   61 LAAEGYARANGISACVVTYSVGALSAFNGTGSAYAENLPLVLISGSPNTNDPSQYHILHHTLGHPDYTYQYEMAKKITCCAVAIPRAIDAPRLIDRALRAAILARKPCYIEIPTNLAGA--TCVRPGPISAITDPITSDKSALEAAAKCAAEYLDGKLKPVILVGPKAGRAGSEKELIEFAEAMGCAVALQPAAKGMFPEDHKQFVGIFWGQVSSDAADAMVHWADAMICVGAVFNDYS 297          
BLAST of CN186411 vs. ExPASy Swiss-Prot
Match: PDC_ASPOR (Pyruvate decarboxylase OS=Aspergillus oryzae GN=pdcA PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.076e-28
Identity = 86/241 (35.68%), Postives = 120/241 (49.79%), Query Frame = 3
Query:    6 AADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLXXXXXXXXXFLNKAVKPVLVAGP---KMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS 719
            AADGYAR  G+ A V TF VG LS LNAIAGAYSE +P++ IVG P++       +LHHT+G  DF+   R    ++C    +N+  +   LID A+      S+PVYIS+  ++         R   P  LS   ++             +L+ A KPV++      + RV    + FVE +   G    V P  KG V E H ++ G Y G  S     E VES+D  L  G I +D++
Sbjct:   66 AADGYARINGMSALVTTFGVGELSALNAIAGAYSEFVPIVHIVGQPHTKSQKDGMLLHHTLGNGDFNVFTRMSADISCTLGCLNSTHEVATLIDNAIRECWIRSRPVYISLPTDM-VTKKIEGERLDTPLDLSLPPNDPEKEDYVVDVVLKYLHAAKKPVILVDACAIRHRVLDEVHEFVEKS---GLPTFVAPMGKGAVDETHKNYGGVYAGTGSNPGVREQVESSDLILSIGAIKSDFN 302          
BLAST of CN186411 vs. ExPASy Swiss-Prot
Match: PDC1_KLULA (Pyruvate decarboxylase OS=Kluyveromyces lactis GN=PDC1 PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 1.030e-27
Identity = 76/238 (31.93%), Postives = 117/238 (49.16%), Query Frame = 3
Query:    6 AADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLXXXXXXXXXFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS 719
            AADGYAR +G+   + TF VG LS LN IAG+Y+E++ ++ +VG P+ +      +LHHT+G  DF+   R    ++   A++ ++  A   ID  + T     +PVY+ +  NL  +  P  S    P  LS K ++              + +A  PV++A        A     +L D   +   V P  KG + E HP F G Y G +S+    E VESAD  L  G + +D++
Sbjct:   57 AADGYARLKGMSCIITTFGVGELSALNGIAGSYAEHVGVLHVVGVPSVSSQAKQLLLHHTLGNGDFTVFHRMSSNISETTAMITDINTAPAEIDRCIRTTYVSQRPVYLGLPANLVDLTVPA-SLLDTPIDLSLKPNDPEAEEEVIENVLQLIKEAKNPVILADACCSRHDAKAETKKLIDLTQFPAFVTPMGKGSIDEKHPRFGGVYVGTLSSPAVKEAVESADLVLSVGALLSDFN 293          
BLAST of CN186411 vs. ExPASy Swiss-Prot
Match: PDC1_KLUMA (Pyruvate decarboxylase OS=Kluyveromyces marxianus GN=PDC1 PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.295e-27
Identity = 75/238 (31.51%), Postives = 115/238 (48.32%), Query Frame = 3
Query:    6 AADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLXXXXXXXXXFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS 719
            AADGYAR +G+   + TF VG LS LN IAG+Y+E++ ++ +VG P+ +      +LHHT+G  DF+   R    ++   A++ ++  A   ID  + T     +PVY+ +  NL  +  P    E  P  LS K ++              +  A  PV++A              +L D   +   V P  KG + E HP F G Y G +S+    E VESAD  L  G + +D++
Sbjct:   57 AADGYARLKGMACVITTFGVGELSALNGIAGSYAEHVGVLHVVGVPSISSQAKQLLLHHTLGNGDFTVFHRMSSNISETTAMITDINSAPSEIDRCIRTTYISQRPVYLGLPANLVDLKVPASLLE-TPIDLSLKPNDPEAENEVLETVLELIKDAKNPVILADACCSRHNVKAETKKLIDITQFPAFVTPMGKGSIDEQHPRFGGVYVGTLSSPEVKEAVESADLVLSVGALLSDFN 293          
BLAST of CN186411 vs. ExPASy Swiss-Prot
Match: PDC1_CANGA (Pyruvate decarboxylase OS=Candida glabrata GN=PDC1 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 8.721e-27
Identity = 77/238 (32.35%), Postives = 115/238 (48.32%), Query Frame = 3
Query:    6 AADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHELIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLXXXXXXXXXFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS 719
            AADGYAR +G+   + TF VG LS LN IAG+Y+E++ ++ +VG P+ +      +LHHT+G  DF+   R    ++   A+V ++  A   ID  + T     +PVY+ +  NL  +  P    E  P  LS K ++              +  A  PV++A              +L DA  +   V P  KG + E HP F G Y G +S     E VESAD  L  G + +D++
Sbjct:   57 AADGYARIKGMSCIITTFGVGELSALNGIAGSYAEHVGVLHVVGVPSISSQAKQLLLHHTLGNGDFTVFHRMSANISETTAMVTDIATAPAEIDRCIRTTYITQRPVYLGLPANLVDLKVPAKLLE-TPIDLSLKPNDPEAETEVVDTVLELIKAAKNPVILADACASRHDVKAETKKLIDATQFPSFVTPMGKGSIDEQHPRFGGVYVGTLSRPEVKEAVESADLILSVGALLSDFN 293          
BLAST of CN186411 vs. ExPASy Swiss-Prot
Match: PDC_ASPFU (Pyruvate decarboxylase OS=Aspergillus fumigatus GN=pdcA PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.488e-26
Identity = 83/241 (34.44%), Postives = 117/241 (48.55%), Query Frame = 3
Query:    6 AADGYARSRGVGACVVTFTVGGLSVLNAIAGAYSENLPLICIVGGPNSNDYGTNRILHHTIGLPDFSQELRCFQTVTCYQAVVNNLEDAHE---LIDTAVSTALKESKPVYISVACNLPAIPHPTFSREPVPFSLSPKLSNEMGLXXXXXXXXXFLNKAVKPVLVAGPKMRVAKACNAFVELADACGYAVAVMPSAKGLVPEHHPHFIGTYWGAVSTAFCAEIVESADAYLFAGPIFNDYS 719
            AADGYAR  G+ A + TF VG LS +NAIAGAYSE +P++ IVG P++       +LHHT+G  D++   R    V+     V  L D HE   LID A+      S+PVYI++  ++         R   P  LS   ++             +L+ A +PV++        K      +L +A G    V P  KG V E H ++ G Y G  S     E VES+D  L  G I +D++
Sbjct:   66 AADGYARVNGISALITTFGVGELSAINAIAGAYSEFVPIVHIVGQPHTRSQRDGMLLHHTLGNGDYNVFARMNAGVS---TTVGRLNDTHEVATLIDNAIRECWIRSRPVYITLPTDM-VTKKIEGERLNTPIDLSLPANDPEKEDYVVDVVLKYLHAAQRPVILVDACAIRHKVLQEVHDLMEASGLPTFVAPMGKGAVDETHKNYGGVYAGDGSNTGVREQVESSDLILSIGAIKSDFN 302          
The following BLAST results are available for this feature:
BLAST of CN186411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
PDC2_PEA2.429e-6184.21Pyruvate decarboxylase isozyme 2 (Fragment) OS=Pis... [more]
PDC3_SCHPO4.298e-5042.44Probable pyruvate decarboxylase C186.09 OS=Schizos... [more]
PDC2_SCHPO7.332e-5041.42Probable pyruvate decarboxylase C1F8.07c OS=Schizo... [more]
PDC_ZYMMO5.809e-4740.34Pyruvate decarboxylase OS=Zymomonas mobilis GN=pdc... [more]
PDC_NEUCR6.423e-4639.75Pyruvate decarboxylase OS=Neurospora crassa GN=cfp... [more]
PDC_ASPOR2.076e-2835.68Pyruvate decarboxylase OS=Aspergillus oryzae GN=pd... [more]
PDC1_KLULA1.030e-2731.93Pyruvate decarboxylase OS=Kluyveromyces lactis GN=... [more]
PDC1_KLUMA2.295e-2731.51Pyruvate decarboxylase OS=Kluyveromyces marxianus ... [more]
PDC1_CANGA8.721e-2732.35Pyruvate decarboxylase OS=Candida glabrata GN=PDC1... [more]
PDC_ASPFU1.488e-2634.44Pyruvate decarboxylase OS=Aspergillus fumigatus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002N17_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002N17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186411 ID=CN186411; Name=CN186411; organism=Citrus sinensis; type=EST; length=719bp
GGATCGCTGCCGATGGGTACGCTCGCTCGCGTGGGGTCGGCGCCTGTGTC
GTGACCTTCACCGTTGGTGGGCTTAGCGTGCTTAACGCTATCGCCGGTGC
TTACAGTGAAAATCTGCCGTTGATTTGCATCGTTGGTGGCCCAAACTCCA
ATGATTACGGAACCAACAGGATCCTTCATCATACCATTGGCTTGCCTGAT
TTTAGCCAAGAACTCAGATGCTTTCAGACTGTCACCTGTTATCAGGCTGT
GGTGAATAACTTGGAGGATGCACATGAGTTGATTGATACGGCAGTATCAA
CTGCTTTGAAAGAAAGCAAGCCTGTTTATATCAGCGTTGCTTGTAACTTG
CCTGCGATTCCTCATCCTACTTTTAGCCGAGAGCCCGTTCCATTTTCGCT
TTCTCCCAAGTTGAGTAATGAGATGGGCTTGGAGGCTGCAGTTGAGGCAG
CAGCAGAGTTCTTGAACAAGGCGGTGAAACCAGTGTTGGTTGCTGGGCCC
AAAATGAGAGTGGCCAAGGCTTGCAATGCTTTCGTTGAGCTTGCTGATGC
TTGTGGCTACGCCGTTGCGGTGATGCCATCAGCGAAAGGGCTAGTACCAG
AGCACCATCCCCATTTTATTGGAACTTATTGGGGTGCCGTGAGCACTGCT
TTTTGTGCTGAAATTGTGGAATCTGCTGATGCTTATTTGTTTGCTGGACC
TATATTTAATGACTATAGC
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